Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0184 ATGGATGATTGCCCCACTCACCATCAGCTGCAGCTGCAGGCGCAGGCGCAGGATTCTAAGGAGTTGGAGTTCGATCTCGGATCCGACGAGCCTGAGGCCGCCCCTCTCCCCCTCGCCGTTACTTCCAGGGTTCTGCACATGTTCGGAGACATCGCAGCAGGCCCCGCTTATAGCTTTTCGAAATGGCTAGAACTCGTCCGTAAACGTAACGGCAAACATCGCCCTTCTGCCTTCCACAACCGCCCTCATCCACCCTTCAACATGCCTTATGGTGTAGAAGAACTTGTCACTGAGTCCAGAAGTCTTCCTGCTACTGAGCAATCAACTGAAACCAATTTGTGGGATAGGCTCGCTAAAGCTTCAATGATGGACATTGAATCGAGCTCTTTTTCGTGGGATAGGCTCCTGTCTCTTCACCGCACTGAACACAGTAGCAGCACTGAACATTCAGAAGACGAGATGAATAAACCCCTTGAGGTCACTGTAAATTCTGGTGGAGTCGTTTTCTTTGCGCTCTTCAGTCAGCTTGGTTATGACGATAACTTTCCAAAGGAAGCAGCTGCTGTTATAAAGATATCATCTTCAAGAATGGCTACACAATCTGAACGTCTGGGCTACGAATTTGCCAAGTGGCTTGGAGTTCAAACTCCACAGGCTAGAGTTATTCATAATTCTAGCATGGAATGGCTCCAAATAAAAGAAGCTGCAGAGAAGGCACGAGATGTTGCCTGTTTAGAGGGTGACGAGGTTGGTGAAATGACATGTTCTGAACTATTGGAAGCACTCGAATTAAGCAGATGCCTTTTTCTAATGAGCTATGTCCACGGGTCTTCTTTATTAGAAAGTTCAAGTGCATTTGAATCACGGGAAGTAGCCGAGAAATTAGCAGCTGCTATTGGAAGGATCTTGTTATTGGACCTTGTCATCAGAAATGAAGATAGGCTACCTTGCCGTCTTCTTCGTTGGCGTGGAAATTCTGCAAATTTGCTCTTTGCCGATAGAGTAACATGTGCAAGTATGAATGCATTTGAGGAAGCCTTTGATTCTGCTATTAAGCGATATAGACCAAAGGTTGTTACTATGCTTCAGAAGGAAAGAAGGGCAACTTCAGTGGACAGTAGACTGAGTTCTAATTCAAGTCTGCTATTAGAGGCCTCTGAACTTTGTGACATTATTGAATCCCCAAAATCTAGTAACCTAAGTGTAAAAAGTCAAATATCGGACGATATGATGACTTGTGATTTTAGCATTGTGGCTATTGACTCCGGTGTACCTCGTCGACCCCCAGCTGGAAAACGTGCTAATGACCAGTCAATTTACCCCAAGTTAGTTGAGTTGCTACTTAACAGTTCTGAGTTCTCCTCTAATTTATTACATGACATTACAGGAGGGAAATTAGGGTTCCCTTCATTAGCCGATGCCAACTCAACCACTGGTATACAGTTCACGGATATGACTTCCATTGTCCATGAATTTCGTTACGGGTTCCGTGCTGCTCTTAGGGATCTGCAAGGATTTCACATATTTTTGCTTACACTTCACCAAAAGTTGGACAACTCACTACGAGCATTCATGAATATCATAAATAAATTTCCCTTGGGGGAATCTGATAAAGAAGATTCAGGGGTTCCTGAGTCCCATTCGCAAGTTTCTGCCACTTGTCATTGTCTATCTCCACGTGGTAAGGAACGAGCCTCTAATGACAGTAGTGTGGATTTTACAGATTCAGCTCCAAGATCATCGTCATTAGGAAATAAAGAAAGCTCAGACTCAACTTCTCCCTTGTCACGAGATAGCTCACAAGGAAAGTTATACAGGGGAAGTGCAGAGCCCATTCGTAGCCTTCGTTTGACTGCAAAGCTTCGAGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCAAACAAAGAATTGGATATGTGGAATGAAGTGCTAAAGAATGAAGCGGTTAAACTCTGCCAAGAGAACAAATTTAATACTGGGTTTTTTGAGGGCAGCGATAGTCATGGAGTTGTCGATGCTTATGAATTGAAGGTGAGACTTGAGCACATTCTTGAAAGGATTGCACTAATATCTGAGGCTGCAAATACAGAAAGGCCTTCTTCAGTTACAGCTGCCTTGTTTATAGGGGGTGCCTTGGCTGCAAGATCTGTTTACACTCTTCAGCATCTAGGAGTCACTCATATCTTATGTCTTTGCTCAAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATTTATTTGAATACAAAAATTTTTCCATAAGTGATAATGAAGACTCAAACATCAGCAGTATCTTTGAAGAAGCTTGTGATTTTATTGATGACATTGAAAGTAAGAGTGGAAAGGTTCTGGTTCATTGCTTTGAAGGGAGAAGCAGAAGTGCCACATTAGTTCTTGCTTACCTGATGCTCAGAAAGAATTATACACTGTTAAAGGCATGGAGTGCTCTGAAACGAGTTCACCGTCGAGCTCAGCCTAATGATGGGTTTGCTAAAATATTACTAGAATTAGATCGACGAATACATGGAAAAGTTTCGATGGAGTGGCAATCACGGAAACCAACGATGAAAGTTTGCCCAATTTGTGGGAAAAATGCAGGTCTGAGTAGTAGCTCATTGAAGCTTCATCTGCAAAAATCACACAAGAAACTATCATCTGGGAGTGTAGACAGTGCAATGACAATGGAAATACAGAAAGCATTAACAGCTCTGAGAATTAGTCGTGGGGGAAGCGTAAGCCCCACCCAGAGGCAATCTCTTCTCATCTTGGATGAATAG 2781 43.19 MDDCPTHHQLQLQAQAQDSKELEFDLGSDEPEAAPLPLAVTSRVLHMFGDIAAGPAYSFSKWLELVRKRNGKHRPSAFHNRPHPPFNMPYGVEELVTESRSLPATEQSTETNLWDRLAKASMMDIESSSFSWDRLLSLHRTEHSSSTEHSEDEMNKPLEVTVNSGGVVFFALFSQLGYDDNFPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNSSMEWLQIKEAAEKARDVACLEGDEVGEMTCSELLEALELSRCLFLMSYVHGSSLLESSSAFESREVAEKLAAAIGRILLLDLVIRNEDRLPCRLLRWRGNSANLLFADRVTCASMNAFEEAFDSAIKRYRPKVVTMLQKERRATSVDSRLSSNSSLLLEASELCDIIESPKSSNLSVKSQISDDMMTCDFSIVAIDSGVPRRPPAGKRANDQSIYPKLVELLLNSSEFSSNLLHDITGGKLGFPSLADANSTTGIQFTDMTSIVHEFRYGFRAALRDLQGFHIFLLTLHQKLDNSLRAFMNIINKFPLGESDKEDSGVPESHSQVSATCHCLSPRGKERASNDSSVDFTDSAPRSSSLGNKESSDSTSPLSRDSSQGKLYRGSAEPIRSLRLTAKLRDFHKFAKVDAESNKELDMWNEVLKNEAVKLCQENKFNTGFFEGSDSHGVVDAYELKVRLEHILERIALISEAANTERPSSVTAALFIGGALAARSVYTLQHLGVTHILCLCSNEIGQSDSQFPDLFEYKNFSISDNEDSNISSIFEEACDFIDDIESKSGKVLVHCFEGRSRSATLVLAYLMLRKNYTLLKAWSALKRVHRRAQPNDGFAKILLELDRRIHGKVSMEWQSRKPTMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALRISRGGSVSPTQRQSLLILDE 926
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4465345 4473520 - MC01g0068 Mch1g0184 675076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0184 926 ProSitePatterns Tyrosine specific protein phosphatases active site. 786 796 IPR016130 GO:0016311(InterPro)
Mch1g0184 926 CDD DSP 700 837 - -
Mch1g0184 926 Pfam Dual specificity phosphatase, catalytic domain 711 840 IPR000340 GO:0016311(InterPro)
Mch1g0184 926 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 14 925 IPR035010 GO:0004721(InterPro)|GO:0009737(InterPro)|GO:0043622(InterPro)
Mch1g0184 926 ProSiteProfiles Dual specificity protein phosphatase domain profile. 699 844 IPR020422 GO:0006470(InterPro)
Mch1g0184 926 MobiDBLite consensus disorder prediction 570 603 - -
Mch1g0184 926 MobiDBLite consensus disorder prediction 536 607 - -
Mch1g0184 926 SMART dsp_5 699 841 IPR020422 GO:0006470(InterPro)
Mch1g0184 926 Pfam Actin-fragmin kinase, catalytic 110 423 IPR015275 -
Mch1g0184 926 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 699 843 IPR029021 -
Mch1g0184 926 FunFam Dual specificity protein phosphatase PHS1 671 845 - -
Mch1g0184 926 SUPERFAMILY Protein kinase-like (PK-like) 61 437 IPR011009 -
Mch1g0184 926 Gene3D - 278 520 IPR036940 -
Mch1g0184 926 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 771 820 IPR000387 GO:0016311(InterPro)
Mch1g0184 926 Gene3D Protein tyrosine phosphatase superfamily 682 853 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0184 Mch-Chr1:4465345 Mch6g0016 Mch-Chr6:129297 2.02E-17 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0184 K14165 - csv:101220184 1533.47