Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0359 ATGATCCCCTCATTACTCATCCTCTTCTCATCGGCGTTCCTCGTTTCCCTCTGCTCGTCTCTGAACTCCGACGGGCTCTCCCTTCTGGCCCTGAAGGCCGCCATTGAAACCGACCCATCTCACCTCCTCGAGTCCTGGTCCGAGTTCGACTCAACCCCATGCCACTGGCCCGGAATCGTCTGCACTCGCGACCGAGTCACCCAGCTCTCCCTCCCCAACAAGGGCTTCTCCGGCTACATCCCCTCCGAACTCGGCCTCCTCGACTCGCTCCGGCGACTCAGCCTCGCATTCAACAATTTCTCTCAACCGATCCCTTTCCATCTCTACAATGCCACCAATCTCGTCGTTCTCGATCTCTCCCACAACTCCCTCTCCGGCCCCGTCTCCGATCAAATCGCCGATCTGAGAAAGCTCCGGCATCTCGACTTGTCCTCCAATTTACTCAACGGCTCGCTCCCCCGGCGACTCACTGAGTTGAGCGAACTCGTCGGGACGCTGAATTTGTCGTACAATCGATTCTCCGGCGAGGTTCCGGCGTCGTTCGGGAACCTTCCGCTGGTCGTGAATCTCGACGTCCGGCACAACAATCTCACCGGGAAGATTCCTCAGGTCGGGTCGCTGCTGAATCAGGGCCCCACCGCGTTCTCCGGCAATCCGAGCCTCTGTGGGTTTCCGTTACAGACGCCATGCCCGGAAGCTCAAAACCCGAACGTTTTTCCCAGCACGGAGAATCCACAGAACCCCAAATCTCTGAACCCTAATTTCCAGGGCTACGGCGGCGGTGGAGCTCGAGGCGGCGGAGGCGGTGGGATGGCGACGGTGGCGGTGGTGTCGTCGATTTTCGCGGTGGTCGGGGCGGTGTCGCTGTCGGTATGGTGGTTGCGGAGGAGGGCGGCAGCGGGGGAGGGGAAAACGGGAAAAGCGAGCCCCGAGGGAGGGAGCGAAGGGGATTTGGAAGGGCAGGAAGGTAAATTCGCAGTGATGGACGAGGGGATGAATTTGGAATTAGAGGATTTGTTGAGGGCATCGGCGTACGTGGTGGGGAAAAGTAGGAGTGGGATAGTGTACAAGGTAGTGGCGGGGCGGGGATCGGGTGCGGCCGGGAGTATTGTAGCGGTTAGAAGACTGAACGATGGGGATGCCACGTTGACGTACAAGGATTTCGAATACGAGATGGACGGCATCGGTAGGGTCCACCACCCCAACATCGTACGGCTGAGAGCTTATTACTATGCCAGTGATGAGAAATTGCTGGTCACCGATTTCATCAAAAATGGAAGCTTGCACTCTGCCCTACATGGAGGTCCCTCCAGTTCTTTGTCACCTCTGCCATGGTCTGCAAGGTTAAAAATTGCCCAAGGAGCTGCAAGGGGTTTAGCATACATTCATGAATTTGGTGCTCGGAAGTATGTTCATGGAAATGTAAAATCGACAAAAATCCTTCTCGACGATGATCTCGAGCCTTACATTTCAGGTTTCGGACTGAATCGTCTCGGCCAAGGAACACCCAAGTTCACTACAACATCGTCGAAAAAGTTGAGCTCAAACCAGAATATGATAACCTCATTCATGGGTCCAAGCATTTCTACTCCCTCAGCGATGTACCTGGCGCCCGAGGTTCGAGAGTATGGAGGGAAGTACACACAGAAATGCGACGTCTACTCGTTCGGTATCGTGCTCATGGAGCTTTTGAGTGGCAAATTGCCCGATGCTGGATCGGAAAATGACGGGAAGGGGTTGGAGAGTTTTGTGAGGAAGGCATTTCAAGAAGAACGCCCCTTGACCGAGGTTATAGACCCAACACTCGTACCTGAGATTTATGCAAAGAAACAAGTGGTTTCGACGTTTCACATTGCACTAAATTGCACCGAGCTTGATCCCGAGATGCGCCCGAGAATGAGAATGGTCTCGGAGAGTCTTGATCGAATCAAATCTCAGTGA 1941 54.66 MIPSLLILFSSAFLVSLCSSLNSDGLSLLALKAAIETDPSHLLESWSEFDSTPCHWPGIVCTRDRVTQLSLPNKGFSGYIPSELGLLDSLRRLSLAFNNFSQPIPFHLYNATNLVVLDLSHNSLSGPVSDQIADLRKLRHLDLSSNLLNGSLPRRLTELSELVGTLNLSYNRFSGEVPASFGNLPLVVNLDVRHNNLTGKIPQVGSLLNQGPTAFSGNPSLCGFPLQTPCPEAQNPNVFPSTENPQNPKSLNPNFQGYGGGGARGGGGGGMATVAVVSSIFAVVGAVSLSVWWLRRRAAAGEGKTGKASPEGGSEGDLEGQEGKFAVMDEGMNLELEDLLRASAYVVGKSRSGIVYKVVAGRGSGAAGSIVAVRRLNDGDATLTYKDFEYEMDGIGRVHHPNIVRLRAYYYASDEKLLVTDFIKNGSLHSALHGGPSSSLSPLPWSARLKIAQGAARGLAYIHEFGARKYVHGNVKSTKILLDDDLEPYISGFGLNRLGQGTPKFTTTSSKKLSSNQNMITSFMGPSISTPSAMYLAPEVREYGGKYTQKCDVYSFGIVLMELLSGKLPDAGSENDGKGLESFVRKAFQEERPLTEVIDPTLVPEIYAKKQVVSTFHIALNCTELDPEMRPRMRMVSESLDRIKSQ 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7461927 7466991 + MC01g0161 Mch1g0359 675251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0359 646 Pfam Leucine Rich Repeat 165 184 IPR001611 GO:0005515(InterPro)
Mch1g0359 646 Gene3D Phosphorylase Kinase; domain 1 322 422 - -
Mch1g0359 646 Gene3D Transferase(Phosphotransferase) domain 1 423 646 - -
Mch1g0359 646 SUPERFAMILY L domain-like 20 227 - -
Mch1g0359 646 SUPERFAMILY Protein kinase-like (PK-like) 346 640 IPR011009 -
Mch1g0359 646 Gene3D Ribonuclease Inhibitor 164 232 IPR032675 -
Mch1g0359 646 Gene3D Ribonuclease Inhibitor 21 163 IPR032675 -
Mch1g0359 646 FunFam Leucine-rich repeat receptor-like kinase 26 131 - -
Mch1g0359 646 Pfam Protein tyrosine and serine/threonine kinase 347 640 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g0359 646 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 23 644 IPR046959 -
Mch1g0359 646 PRINTS Leucine-rich repeat signature 135 148 - -
Mch1g0359 646 PRINTS Leucine-rich repeat signature 114 127 - -
Mch1g0359 646 Pfam Leucine rich repeat N-terminal domain 21 62 IPR013210 -
Mch1g0359 646 FunFam Leucine-rich repeat receptor-like protein kinase 137 232 - -
Mch1g0359 646 ProSiteProfiles Protein kinase domain profile. 341 646 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g0359 646 Pfam Leucine rich repeat 89 148 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0359 Mch-Chr1:7461927 Mch9g2356 Mch-Chr9:23523897 1.01E-102 dispersed
Mch1g0359 Mch-Chr1:7461927 Mch9g1932 Mch-Chr9:20819970 1.41E-76 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77097 PF07714 PK_Tyr_Ser-Thr 3.60E-26 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0359 - - - 0.0