Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0365 ATGGCGGATTTCCAAACCTTCATAATCCTCTTCCTCACATGGCTAGTTTCCACCATCACAATACGCTTCATCTTCGCCAAAAACAAACCAAAACCTCTCCCTCCAACCCCTAAATTTGCCCTTCCCATCATCGGCCATCTCCACCTCCTCGGCCCCTTGCCCCACAAAGCCTTCCACAAGCTCTCCTCCCGCCATGGCCCTCTCCTCCACCTCCGCCTCGGCTCTGTCCCCTGCCTTGTTGTTTCCTCCCCCGAAACCGCCAAACAAGTCCTCAAAACCCACGAGTCCTCCTTCTCCAACCGGCCCCGTTTGGCCGCCGTCGACTACCTCACCTACGGCTCGGCCGACTTCTCCTTCGCCCCCTACGGGCCCTTTTGGAAGTTCATGAAGAAGCTCTGCATGTCGGAGCTCCTCGGCGGGGCGACGCTCGACCGCCTCCACCCTGTGAGGCGGGACGAGACAAGGCGGTTCCTGCGGTCGCTCGAGACAAGGGCGACCGAGGGAGAGGAAGTCGACGTGGGAATGGAGTTGATGAGGTTGAGCAACAATGTGATATCTAGAATGATATTTGGGAGGAGAAGTGGTGAGGGGGAAGAGGAGGCTGAGAAGATAAGGAAATTGGTTAAGGATGTGGCTGAGCTTACAGGGACTTTTAATGTTTCAGATTATGTTTGGTTTTGTAAGAATTTGGACTTGCAAGGGCTTGGGAGGAGGCTGAGGGAAGTGAGGGAGAGATTTGATGATATGATGGAGAGGATGATTAAGGAGCATCAAGAGGAGAGAGAGAGCGAGAGAAATGGACAGGATGGTGGGAAAGAGAAGGATTTGCTTCATATTTTGCTTTCTAAGTTTGAAGATGAGAATTCAGAAGTGAAGTTGACAAGAGAGAACATTAAAGCCTTTGTCCTGGACATATTTGCAGCTGGAACAGACACATCTGCAATCACCACAGAATGGGCATTGGCAGAGCTAATAAACCATCCAAACATAATGGAGAAAGCCAAACAAGAACTCCACTCAGTTGTGGGAAAAAACAGACTTGTGGAGGAATCAGACATTGCCAACCTTCCCTATCTCCAAGCAATACTAAAAGAGACACTAAGGCTTCACTCAAGCCCATTGATTGTGAGGGAGTCATCAGAAAGCTGCACAATAAATGGGTATGAGATTCCACCAAAAACCCAGCTGTATGTGAATGTATGGGCCATCGGGAGGGACCCAAACCATTGGGAGAACCCGCTCGAGTTCAAGCCAGAGAGGTTTGTGGACAAAGAACGGAGTGTGAGTTGCGATCTGAGAGGACAGAATTTTCAGCTGTTGCCATTTGGGAGTGGGAGGAGGAGTTGCCCTGGAACTACTCTTGCATTGCTGATGGTTCAGACTACTTTGGGTTGTATGATTCAGTGCTTTGATTGGAAGGCTAATGGAGGAGATGGGAAAGTTGATATGGAAGAAGGGCCTGGCCTTACACTTCCTAGGGCACAGCCTTTGGTTTGTGTCCCAATGGCTTCTCTTAGTCCATTTCCAACCCTTTGA 1536 50.07 MADFQTFIILFLTWLVSTITIRFIFAKNKPKPLPPTPKFALPIIGHLHLLGPLPHKAFHKLSSRHGPLLHLRLGSVPCLVVSSPETAKQVLKTHESSFSNRPRLAAVDYLTYGSADFSFAPYGPFWKFMKKLCMSELLGGATLDRLHPVRRDETRRFLRSLETRATEGEEVDVGMELMRLSNNVISRMIFGRRSGEGEEEAEKIRKLVKDVAELTGTFNVSDYVWFCKNLDLQGLGRRLREVRERFDDMMERMIKEHQEERESERNGQDGGKEKDLLHILLSKFEDENSEVKLTRENIKAFVLDIFAAGTDTSAITTEWALAELINHPNIMEKAKQELHSVVGKNRLVEESDIANLPYLQAILKETLRLHSSPLIVRESSESCTINGYEIPPKTQLYVNVWAIGRDPNHWENPLEFKPERFVDKERSVSCDLRGQNFQLLPFGSGRRSCPGTTLALLMVQTTLGCMIQCFDWKANGGDGKVDMEEGPGLTLPRAQPLVCVPMASLSPFPTL 511
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 7516572 7519157 + MC01g_new0203 Mch1g0365 675257
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0365 511 Pfam Cytochrome P450 34 499 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 SUPERFAMILY Cytochrome P450 29 501 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 CDD CYP93 66 501 - -
Mch1g0365 511 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch1g0365 511 PANTHER CYTOCHROME P450 93A3-LIKE 6 502 - -
Mch1g0365 511 Coils Coil 232 252 - -
Mch1g0365 511 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch1g0365 511 FunFam Cytochrome P450 family protein 26 499 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0365 Mch-Chr1:7516572 Mch9g0532 Mch-Chr9:3921555 1.49E-142 dispersed
Mch1g0365 Mch-Chr1:7516572 Mch5g1415 Mch-Chr5:15234172 3.52E-193 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0365 K24188 - csv:101213143 798.505