Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch1g0381 | ATGGAGGTCGATGCTAATTCAGGGAAGTCGTCCAAACAGATTGGGGGCGGCCAGGTGTGTCAGATCTGCAGCGATTCCGTCGGCAAGACGGCCGACGGCGAGCCTTTTGTTGCGTGCGACGTTTGTGCATTTCCGGTTTGCCGTCCGTGTTACGAGTATGAGAGGAAAGATGGGAATCAGTCTTGCCCTCAATGCAAGACCAAATACAAGTGGCACAAAGGAAGTCCTCCGGTTAATGGAGAAGCTGTGGAAGATGGTAATGGTAATGGAGTAGCAGAGGGTCAAGAAAGACACCATAAGGTACCAGAGCGCACGCTCAGCTGGGATACAAATTATGATAAGGAGGGATCTTTTAACCATATTCCTTTGCTTACCACTGGACGATCTGTTTCTGGAGAGCTCTCTGCTGCATCTCCGGAGCGGCTATCCATGGCATCTCCTGAAAGTGGGAGCAGGGGTAAACTCATTCATTTGATATCTTTGACTAACTATAGAATCATCGATCAATCGAGAGATTCGGGATCGGCTAGGTTTGGCAATGTGGCCTGGAAAGAGAGAATAGATAGTTGGAAGGTGAAGCAGGACAAGAGTGTGCCACCAATGAGTGTCAGTCATGCTCCTTCTGAAGGTAGGGGTGGTGCAGATTTTGACGCCAGCACTGATGTCATTATCGATGATTCTTTACTAAATGACGAAGCCCGCCAGCCTCTATCGAGGAAGGTTTCTATTCCATCCTCTAGGATTAACCCTTATAGGATGGTCATAGTTCTGCGGCTTGTTATTCTTGTCATCTTCCTGCACTACCGTATAACAAATCCAGTTCCCAATGCCTTTGCTCTGTGGTTGATATCAGTGATTTGTGAGATATGGTTTGCTGTATCTTGGATTTTGGATCAGTTCCCCAAATGGCTCCCTGTAAATCGTGAGACATATCTTGATAGGCTTGCTCTACGATATGACCGTGAAGGAGAGCCATCTCAGTTGGCTGCTGTTGACATTTTTGTCAGTACTGTCGACCCTCTGAAAGAACCTCCCCTTGTCACAGCCAATACAGTCCTATCAATTCTCGCCGTGGACTATCCAGTCGATAAAGTTTCTTGCTATGTCTCAGATGATGGAGCTGCTATGTTAACATTTGAAGCCCTGTCTGAAACATCAGAATTTGCCAGAAAATGGGTTCCTTTCTGCAAGAAGTACAGCATTGAGCCACGAGCACCAGAGTGGTATTTTGCTCAGAAGATTGATTACTTAAAGGACAAGGTCCATCCATCATTTGTGAAGGAGCGGCGAGCAATGAAGAGAGAATACGAGGAGTTTAAAATTCGTGTCAATGGACTTGTTGCTAAGGCACAGAAAGTTCCTGATGAAGGGTGGGTCATGCAAGATGGTACACCATGGCCTGGAAATAACACTAGAGATCATCCAGGAATGATACAGGTTTTCTTAGGGCACAGTGGAGGACTCGATACTGAGGGTAATGAGCTTCCACGTTTAGTGTATGTTTCTCGTGAGAAGCGTCCTGGTTTCCAACATCACAAGAAGGCTGGTGCTATGAATGCACTTGTGCGCGTTTCTGCTGTTCTTACCAATGGACCCTTCTTGTTGAATCTTGATTGTGATCACTACATAAACAACAGTAAAGCATTGCGGGAATCTATGTGTTTTCTGATGGATCCTAATCTTGGAAAATCAGTTTGCTATGTTCAGTTTCCTCAGAGATTTGATGGGATTGATAGAAATGATCGATATGCCAACCGTAACACTGTTTTCTTTGATATCAATCTTCGAGGCTTGGATGGCATCCAAGGTCCGGTTTATGTGGGAACAGGATGTGTTTTCAACCGAACTGCATTGTATGGCTATGAACCCCCACTCAAGCCCAAGCATAAAAAACCAGGGCTATTCTCCTCTTGCTTCGGGAAATCAAGAAAGAAAAGTTCCAAGTCGAAAAGAAAGGACTCTGATAAGAAGCAATCAAGTAAAAATGTTGATCCCACTGTGCCAATATTCAACCTCGAGGATATTGAGGAAGGAGTTGAAGGTGCTGGGTTTGATGATGAGAAGTCGCTACTAATGTCACAAATGAGCCTGGAGAAGAGGTTTGGTCAATCAGCTGTATTTGTTGCTTCCACACTAATGGAGAATGGCGGTGTGCCGCAGTCTGCAACTCCGGAATCTCTCCTTAAAGAAGCAATACATGTCATCAGTTGCGGGTACGAGGACAAAACAGACTGGGGAAGTGAAATTGGATGGATCTATGGTTCTGTCACAGAAGATATTTTGACAGGGTTCAAGATGCACGCCCGTGGTTGGAGATCAATCTATTGCATACCAGACCGCCCTGCATTTAAAGGATCTGCTCCTATTAATCTTTCTGATCGTCTAAACCAAGTGCTTCGGTGGGCGTTAGGTTCGGTTGAAATTCTTTTCAGTCGGCATTGCCCTATGTGGTATGGTTATGGCGGACGGTTGAAATGGCTCGAGAGATTTGCTTACGTTAACACCACCATTTACCCAATAACATCCATTCCTCTTCTTGCCTATTGTACCTTGCCTGCAATATGTCTGCTCACGGGAAAGTTCATCATTCCTCAGATAAGCAATCTTGCCAGCATCTGGTTCATTTCTCTCTTTCTTTCCATCTTTGCCACTGGTATTCTGGAAATGAGATGGAGTGGTGTCGGAATCGATGAATGGTGGAGAAACGAGCAGTTCTGGGTTATTGGAGGTGTGTCAGCCCATCTGTTTGCCGTCTTCCAAGGTCTCCTTAAAGTTCTTGCAGGAATTGATACCAACTTTACCGTTACCTCGAAAGCATCTGACGAAGATGGAGATTTTGCTGAGCTCTACATGTTCAAGTGGACCACTCTCCTCATTCCCCCAACCACTCTCCTTATCATCAACATAGTTGGAGTTGTTGCTGGAATTTCTTATGCCATTAACAGTGGCTATCAATCTTGGGGTCCCCTTTTCGGAAAACTGTTCTTCGCTTTCTGGGTGATTATTCATCTTTATCCCTTCCTCAAGGGTCTGATGGGTCGCCAGAACCGAACTCCCACGATCGTGGTTGTGTGGTCCATCCTTCTCGCCTCAATCTTCTCCCTTTTATGGGTTCGAATCGATCCCTTCACAACCCGGGTAACTGGCCCTGATGTCGAACAATGTGGAATCAACTGCTAA | 3180 | 45.6 | MEVDANSGKSSKQIGGGQVCQICSDSVGKTADGEPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTKYKWHKGSPPVNGEAVEDGNGNGVAEGQERHHKVPERTLSWDTNYDKEGSFNHIPLLTTGRSVSGELSAASPERLSMASPESGSRGKLIHLISLTNYRIIDQSRDSGSARFGNVAWKERIDSWKVKQDKSVPPMSVSHAPSEGRGGADFDASTDVIIDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILVIFLHYRITNPVPNAFALWLISVICEIWFAVSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKERRAMKREYEEFKIRVNGLVAKAQKVPDEGWVMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALRESMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLFSSCFGKSRKKSSKSKRKDSDKKQSSKNVDPTVPIFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCIPDRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPMWYGYGGRLKWLERFAYVNTTIYPITSIPLLAYCTLPAICLLTGKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINIVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC | 1059 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7864017 | 7873286 | + | MC01g0171 | Mch1g0381 | 675273 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch1g0381 | 1059 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 449 | 622 | IPR029044 | - | |
Mch1g0381 | 1059 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 93 | IPR013083 | - | |
Mch1g0381 | 1059 | Pfam | Cellulose synthase | 331 | 1052 | IPR005150 | GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro) | |
Mch1g0381 | 1059 | SUPERFAMILY | RING/U-box | 8 | 88 | - | - | |
Mch1g0381 | 1059 | FunFam | Cellulose synthase | 448 | 622 | - | - | |
Mch1g0381 | 1059 | Pfam | Zinc-binding RING-finger | 16 | 85 | IPR027934 | - | |
Mch1g0381 | 1059 | CDD | mRING-HC-C4C4_CesA | 18 | 68 | - | - | |
Mch1g0381 | 1059 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 345 | 861 | IPR029044 | - | |
Mch1g0381 | 1059 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 239 | 1028 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER) | |
Mch1g0381 | 1059 | MobiDBLite | consensus disorder prediction | 632 | 665 | - | - | |
Mch1g0381 | 1059 | ProSiteProfiles | Zinc finger RING-type profile. | 20 | 66 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g0381 | Mch-Chr1:7864017 | Mch9g0557 | Mch-Chr9:4059083 | 0 | dispersed | |
Mch1g0381 | Mch-Chr1:7864017 | Mch5g0065 | Mch-Chr5:443226 | 6.00E-99 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch1g0381 | K10999 | - | csv:101211779 | 2067.35 |