Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0440 ATGTGGATTTTGGTGGGTCTTTGTTTGCAGTACAAAGCTATTCATCTCTTCTCTTCTCCTCTCCCTCTCCCTTTTTCCCTTCAGCTCCTCCCAATTTCCATTTCCATTTCCATTTCCTCTCAAAATTCTTCACCTTCTTCTTCTTCCTCTGTTATGGGATCTTCTGTTGCTGCAATGGGTATGGTTTCTGAATCCAAATTCCATGTTCTCGCTGTCGATGATAGCCTCATCGATCGGAAATTGATCGAGCGGCTTCTCAAAACCTCCTCATATCAAGTCACTACGGTTGATTCTGGGAGCAAGGCTTTGGAGTTTCTGGGGTTGCGAGGAGATGACCCGGGAAACAACTCGATTCCTTCTGTTTTCCCTAATAATCACCATCAGATGGTGGATGTGAACCTTGTAATCACAGATTACTGTATGCCTGAGATGACTGGCTATGATTTGTTGAAGAAGATCAAGGGGTCTAAAGCTCTGAGAAACATACCTGTTGTGATTATGTCATCTGAGAATGTGCCTTCAAGAATCAATAGATGTTTAGAAGAAGGAGCCGAAGAATTCTTCTTGAAACCGGTCCGATTATCCGATGTCAACAGGCTCAGACCCCACTTGTTGAAAACCAAACTCAAATGTGACAAACCAGAAAGAAGAGAAGAGGAGTCTGATTCAGAAAGCCAACCCCAAGCTCTAGAGCAACAACAGCCTCAACAACAACAACATCCCGAACAAGAACAATTACGATCGCTACTGCAGCAGGTCCCGACACCATCACAGGATCAAGTTCAACCGCAACCCGTATCGCTGCTGCCAACGCCACCACAGGAGCAAGAACAGTTGCAATTACTCCCGCCAACGCCACCGCAACAATCGAACAGCAACAAGAGGAAGGCAATGGAAGATGGACTCTCACCAGATAGAACAAGGCCTAGATACAATGGTATTACCACCATGGTGTAG 957 45.45 MWILVGLCLQYKAIHLFSSPLPLPFSLQLLPISISISISSQNSSPSSSSSVMGSSVAAMGMVSESKFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRGDDPGNNSIPSVFPNNHHQMVDVNLVITDYCMPEMTGYDLLKKIKGSKALRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDVNRLRPHLLKTKLKCDKPERREEESDSESQPQALEQQQPQQQQHPEQEQLRSLLQQVPTPSQDQVQPQPVSLLPTPPQEQEQLQLLPPTPPQQSNSNKRKAMEDGLSPDRTRPRYNGITTMV 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8680262 8682156 - MC01g0222 Mch1g0440 675332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0440 318 MobiDBLite consensus disorder prediction 209 318 - -
Mch1g0440 318 SUPERFAMILY CheY-like 65 213 IPR011006 -
Mch1g0440 318 MobiDBLite consensus disorder prediction 209 224 - -
Mch1g0440 318 Pfam Response regulator receiver domain 128 196 IPR001789 GO:0000160(InterPro)
Mch1g0440 318 PANTHER TWO-COMPONENT RESPONSE REGULATOR 63 262 IPR045279 GO:0009736(InterPro)
Mch1g0440 318 SMART REC_2 67 204 IPR001789 GO:0000160(InterPro)
Mch1g0440 318 MobiDBLite consensus disorder prediction 226 297 - -
Mch1g0440 318 CDD REC_typeA_ARR 69 200 - -
Mch1g0440 318 Gene3D - 68 299 - -
Mch1g0440 318 ProSiteProfiles Response regulatory domain profile. 68 205 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0440 Mch-Chr1:8680262 Mch9g2202 Mch-Chr9:22574997 4.80E-49 dispersed
Mch4g1566 Mch-Chr4:18960438 Mch1g0440 Mch-Chr1:8680262 6.41E-68 transposed
Mch4g1781 Mch-Chr4:20749729 Mch1g0440 Mch-Chr1:8680262 2.95E-52 transposed
Mch9g1380 Mch-Chr9:16186608 Mch1g0440 Mch-Chr1:8680262 1.88E-46 transposed
Mch1g0440 Mch-Chr1:8680262 Mch9g1736 Mch-Chr9:19355098 1.68E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42670 PF00072 Response_reg 7.50E-18 CL0304 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0440 K14492 - csv:101220999 353.984