Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0470 ATGGCTTCAAGACCAGTTGTTCCACAACAAATCAGAGGTGAGGCGGTGGTAGGCGGAGGGAAGCAGGCGAAGGGCGGGGCAGCGAACCGCCGAGCATTGGGCGATATCGGAAACCTGGTAACTGTTCGAGGAATTGATGCAAAGGTGAATCGCCCAATTACAAGGAGCTTCTGTGCTCAGTTGCTTGCCAATGCCCAAGCGGCTGCAAAAGCAGAAAACAACAAGAAGCAAGTGCCTGTGACTGTAGATGGGGCCGCTCCCATACTTGATGCTGGTGTTGCAGCAGCTAACAAGAAAGTAGCTCTACCCAAGCAAGCACAGAAGAAGGCAGTAGTTGTTAAACCGAAACCCGAAGTAATCGAGATAAGCCCAGATAGCGTGAAGGAGGATCGGGGCAAGGAAGAAAAATGTGGAAACAAGAAAAAGGACGGAGAAGGAGCCTCAAAGAAAAATACTCAGACTCTCACTTCAGTCCTAACTGCTAGAAGCAAGGCTGCTTGTGGCATAGCCAAGAAACCAAAAGAGCAGATTCTTGATATTGATGCTGCAGATGTTGGTAATGAGTTGGCTGCAGCTGAATATGTTGAGGACATTTACAAGTTCTATAAGGAAGTTGAGAATGAGAATAGGCCTCATGATTATATGGATTCACAACCTGATATAAATAGTTCAATGAGGGCTATTTTGGTTGATTGGTTGGTTGATGTGCACAACAAGTTCGAGCTTTCACCTGAGACTTTCTACCTCACTATTAACATAATCGACCGATTCCTTGCGGCAAAGCTCGTTGCAAGGGGGGAATTGCAGTTGGTGGGTATTGGTGCCATGCTCATCGCCTCCAAATACGAAGAAATCTGGGCGCCAGAGGTAAATGACTTTGTGTGCCTTTCGGATAGAGCTTACACTCATAAACAGATCCTAGTGATGGAGAAAAAGATACTTGGCAAGTTGGAATGGACCTTTACTGTCCCTACACCATACGTTTTTCTGGCTCGATTCATCAAGGCGTCGAAAGACTCCGATCATGAGATGGAAAATCTGGTGTATTTTCTGGCCGAACTTGGCATAATGCATTACAACACCGGAATAACGTACTGCCCGTCCATGATTGCCGCCTCGGCAGTCTACGCCGCCCGGTGCACGCTGAAGAAAACCCCGGCTTGGGATGGAACCCTCAAACTACACACTGGTTTCTCAGAGCCTCAGATAATTGATTGTGCCAAGCTTTTGGTGGGCTACCATGGAGTAGCAGGCAAGAGCAAGCTTCAAGTTATATATCGAAAGTACTCGAGCTCCGAGCGGGGAGCGGTGGCGTTGCTTCAACCAGCAAAAGATCTGTTGGCTGTTAATGGTTCTTCTTTCCAGTGA 1368 47.59 MASRPVVPQQIRGEAVVGGGKQAKGGAANRRALGDIGNLVTVRGIDAKVNRPITRSFCAQLLANAQAAAKAENNKKQVPVTVDGAAPILDAGVAAANKKVALPKQAQKKAVVVKPKPEVIEISPDSVKEDRGKEEKCGNKKKDGEGASKKNTQTLTSVLTARSKAACGIAKKPKEQILDIDAADVGNELAAAEYVEDIYKFYKEVENENRPHDYMDSQPDINSSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLAAKLVARGELQLVGIGAMLIASKYEEIWAPEVNDFVCLSDRAYTHKQILVMEKKILGKLEWTFTVPTPYVFLARFIKASKDSDHEMENLVYFLAELGIMHYNTGITYCPSMIAASAVYAARCTLKKTPAWDGTLKLHTGFSEPQIIDCAKLLVGYHGVAGKSKLQVIYRKYSSSERGAVALLQPAKDLLAVNGSSFQ 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9148953 9151390 + MC01g0242 Mch1g0470 675362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0470 455 CDD CYCLIN_AtCycB-like_rpt2 324 442 - -
Mch1g0470 455 CDD CYCLIN_AtCycB-like_rpt1 174 319 - -
Mch1g0470 455 Gene3D - 197 438 - -
Mch1g0470 455 Pfam Cyclin, N-terminal domain 197 320 IPR006671 -
Mch1g0470 455 MobiDBLite consensus disorder prediction 123 148 - -
Mch1g0470 455 ProSitePatterns Cyclins signature. 226 257 IPR048258 -
Mch1g0470 455 SMART cyclin_7 231 315 IPR013763 -
Mch1g0470 455 SMART cyclin_7 328 412 IPR013763 -
Mch1g0470 455 SUPERFAMILY Cyclin-like 323 444 IPR036915 -
Mch1g0470 455 Gene3D - 211 322 - -
Mch1g0470 455 SUPERFAMILY Cyclin-like 186 320 IPR036915 -
Mch1g0470 455 SMART Cyclin_C_2 324 443 IPR004367 -
Mch1g0470 455 FunFam G2/mitotic-specific cyclin-1 312 438 - -
Mch1g0470 455 Pfam Cyclin, C-terminal domain 324 442 IPR004367 -
Mch1g0470 455 PANTHER CYCLINS 172 430 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Mch1g0470 455 PIRSF Cyclin_A_B_D_E 2 454 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Mch1g0470 455 MobiDBLite consensus disorder prediction 123 149 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0470 Mch-Chr1:9148953 Mch2g0203 Mch-Chr2:1533033 7.32E-133 dispersed
Mch1g0470 Mch-Chr1:9148953 Mch11g0059 Mch-Chr11:387350 2.19E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0470 K21777 - csv:101217210 719.924