Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch1g0470 | ATGGCTTCAAGACCAGTTGTTCCACAACAAATCAGAGGTGAGGCGGTGGTAGGCGGAGGGAAGCAGGCGAAGGGCGGGGCAGCGAACCGCCGAGCATTGGGCGATATCGGAAACCTGGTAACTGTTCGAGGAATTGATGCAAAGGTGAATCGCCCAATTACAAGGAGCTTCTGTGCTCAGTTGCTTGCCAATGCCCAAGCGGCTGCAAAAGCAGAAAACAACAAGAAGCAAGTGCCTGTGACTGTAGATGGGGCCGCTCCCATACTTGATGCTGGTGTTGCAGCAGCTAACAAGAAAGTAGCTCTACCCAAGCAAGCACAGAAGAAGGCAGTAGTTGTTAAACCGAAACCCGAAGTAATCGAGATAAGCCCAGATAGCGTGAAGGAGGATCGGGGCAAGGAAGAAAAATGTGGAAACAAGAAAAAGGACGGAGAAGGAGCCTCAAAGAAAAATACTCAGACTCTCACTTCAGTCCTAACTGCTAGAAGCAAGGCTGCTTGTGGCATAGCCAAGAAACCAAAAGAGCAGATTCTTGATATTGATGCTGCAGATGTTGGTAATGAGTTGGCTGCAGCTGAATATGTTGAGGACATTTACAAGTTCTATAAGGAAGTTGAGAATGAGAATAGGCCTCATGATTATATGGATTCACAACCTGATATAAATAGTTCAATGAGGGCTATTTTGGTTGATTGGTTGGTTGATGTGCACAACAAGTTCGAGCTTTCACCTGAGACTTTCTACCTCACTATTAACATAATCGACCGATTCCTTGCGGCAAAGCTCGTTGCAAGGGGGGAATTGCAGTTGGTGGGTATTGGTGCCATGCTCATCGCCTCCAAATACGAAGAAATCTGGGCGCCAGAGGTAAATGACTTTGTGTGCCTTTCGGATAGAGCTTACACTCATAAACAGATCCTAGTGATGGAGAAAAAGATACTTGGCAAGTTGGAATGGACCTTTACTGTCCCTACACCATACGTTTTTCTGGCTCGATTCATCAAGGCGTCGAAAGACTCCGATCATGAGATGGAAAATCTGGTGTATTTTCTGGCCGAACTTGGCATAATGCATTACAACACCGGAATAACGTACTGCCCGTCCATGATTGCCGCCTCGGCAGTCTACGCCGCCCGGTGCACGCTGAAGAAAACCCCGGCTTGGGATGGAACCCTCAAACTACACACTGGTTTCTCAGAGCCTCAGATAATTGATTGTGCCAAGCTTTTGGTGGGCTACCATGGAGTAGCAGGCAAGAGCAAGCTTCAAGTTATATATCGAAAGTACTCGAGCTCCGAGCGGGGAGCGGTGGCGTTGCTTCAACCAGCAAAAGATCTGTTGGCTGTTAATGGTTCTTCTTTCCAGTGA | 1368 | 47.59 | MASRPVVPQQIRGEAVVGGGKQAKGGAANRRALGDIGNLVTVRGIDAKVNRPITRSFCAQLLANAQAAAKAENNKKQVPVTVDGAAPILDAGVAAANKKVALPKQAQKKAVVVKPKPEVIEISPDSVKEDRGKEEKCGNKKKDGEGASKKNTQTLTSVLTARSKAACGIAKKPKEQILDIDAADVGNELAAAEYVEDIYKFYKEVENENRPHDYMDSQPDINSSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLAAKLVARGELQLVGIGAMLIASKYEEIWAPEVNDFVCLSDRAYTHKQILVMEKKILGKLEWTFTVPTPYVFLARFIKASKDSDHEMENLVYFLAELGIMHYNTGITYCPSMIAASAVYAARCTLKKTPAWDGTLKLHTGFSEPQIIDCAKLLVGYHGVAGKSKLQVIYRKYSSSERGAVALLQPAKDLLAVNGSSFQ | 455 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9148953 | 9151390 | + | MC01g0242 | Mch1g0470 | 675362 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch1g0470 | 455 | CDD | CYCLIN_AtCycB-like_rpt2 | 324 | 442 | - | - | |
Mch1g0470 | 455 | CDD | CYCLIN_AtCycB-like_rpt1 | 174 | 319 | - | - | |
Mch1g0470 | 455 | Gene3D | - | 197 | 438 | - | - | |
Mch1g0470 | 455 | Pfam | Cyclin, N-terminal domain | 197 | 320 | IPR006671 | - | |
Mch1g0470 | 455 | MobiDBLite | consensus disorder prediction | 123 | 148 | - | - | |
Mch1g0470 | 455 | ProSitePatterns | Cyclins signature. | 226 | 257 | IPR048258 | - | |
Mch1g0470 | 455 | SMART | cyclin_7 | 231 | 315 | IPR013763 | - | |
Mch1g0470 | 455 | SMART | cyclin_7 | 328 | 412 | IPR013763 | - | |
Mch1g0470 | 455 | SUPERFAMILY | Cyclin-like | 323 | 444 | IPR036915 | - | |
Mch1g0470 | 455 | Gene3D | - | 211 | 322 | - | - | |
Mch1g0470 | 455 | SUPERFAMILY | Cyclin-like | 186 | 320 | IPR036915 | - | |
Mch1g0470 | 455 | SMART | Cyclin_C_2 | 324 | 443 | IPR004367 | - | |
Mch1g0470 | 455 | FunFam | G2/mitotic-specific cyclin-1 | 312 | 438 | - | - | |
Mch1g0470 | 455 | Pfam | Cyclin, C-terminal domain | 324 | 442 | IPR004367 | - | |
Mch1g0470 | 455 | PANTHER | CYCLINS | 172 | 430 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Mch1g0470 | 455 | PIRSF | Cyclin_A_B_D_E | 2 | 454 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Mch1g0470 | 455 | MobiDBLite | consensus disorder prediction | 123 | 149 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g0470 | Mch-Chr1:9148953 | Mch2g0203 | Mch-Chr2:1533033 | 7.32E-133 | dispersed | |
Mch1g0470 | Mch-Chr1:9148953 | Mch11g0059 | Mch-Chr11:387350 | 2.19E-81 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch1g0470 | K21777 | - | csv:101217210 | 719.924 |