Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0473 ATGGAAGGAAAAGGAAATGGAATTGCCAATTTTGTTGAGGGAGCACAGCCTTACATCGCCATGATCTCTCTCCAATTTGGCTATGCCGGAATGAACATCATCACCAAGGTCGCTCTCAACCGTGGTATGAGTCACTACGTCCTCGTCACCTATCGGCAGACGTTTGCCACCGTCGCACTCGCTCCGTTTGCCTTCTTCCTCGAAAGGAAAGTGAGACCCAAGATTACATTCCCTCTGTTCATGCAGATTTTGCTTCTGGGTCTGTTAGGACCAGTGATTGATCAAAACTTCTATTATGCTGGTTTAAAGCTCACTTCTCCAACCTTCTCTTGTGCCATGAGCAATATGCTTCCTGCAATGACATTCATCTTGGCTCTTCTTTGTAGAATGGAGAAGTTGGAGATGAAGAAAGTGAAGTGCCAAGCCAAGGTGGTGGGAACAATGGTGACAGTGGGTGGAGCCATATTGATGACTTTATACAAAGGGAATGTCATAAGCTTCTTCTGGTCTCACCATTATCTTCACTCTTCTGCTTCCATGGAAAGCACTTATCAAGATTGGGTCAAGGGCTCCATTCTCCTCCTCTTTGCTAATCTTGCTTGGGCTTCATTCTTCATCTTTCAGGCAATGACACTAAAGAAGTACACAGCTCATCTTTCACTCACCACTCTTGTGTGCTTCTTGGGGACTCTTCAATCCATGGCTGTCACTTTTGTAATGGAAAACAACAAATCTTCTGTTTGGACCATTGGGTGGGACATGAATCTTCTTGCTGCTGTCTATGCTGGAATAGTTTCATCAAGCATTGCTTACTATGTCCAAGGGATGATTATGCAGAAGAGAGGGCCTGTGTTTGTCACTGCCTTTACCCCTATGATAATGATCATTGTAGCCATTATGGGCTCTTTCATGCTCGCCGAGAAGATCTATATCGGACGTGTTGTTGGAGGTGTTCTAATGGTGGTGGGGCTGTACTCAGTGCTGTGGGGGAAGTACAGAGATTACAAAGATCAGAAGGAAGCAGTTCTAGAAGAGGCCGCCATTGTTGAGCCAGTGAAGCTCATTATTTGTGAAGCAAAAGTTGGGAAGAAATTGGCAACTGTAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAAAACCGACATCATCATCATTAAACGACATCGAAATGCAAAGGAACGACACAACATCCATTGTCGGAATTAGTGTTTCAATATTGCCATCTCCTCCTCCACCCATTATTGTTATTGCTATGCAAAAAGCACCACCAAAAGCTTGA 1278 44.13 MEGKGNGIANFVEGAQPYIAMISLQFGYAGMNIITKVALNRGMSHYVLVTYRQTFATVALAPFAFFLERKVRPKITFPLFMQILLLGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFILALLCRMEKLEMKKVKCQAKVVGTMVTVGGAILMTLYKGNVISFFWSHHYLHSSASMESTYQDWVKGSILLLFANLAWASFFIFQAMTLKKYTAHLSLTTLVCFLGTLQSMAVTFVMENNKSSVWTIGWDMNLLAAVYAGIVSSSIAYYVQGMIMQKRGPVFVTAFTPMIMIIVAIMGSFMLAEKIYIGRVVGGVLMVVGLYSVLWGKYRDYKDQKEAVLEEAAIVEPVKLIICEAKVGKKLATVVEEEEEEEEEKPTSSSLNDIEMQRNDTTSIVGISVSILPSPPPPIIVIAMQKAPPKA 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9178636 9183561 + MC01g0245 Mch1g0473 675365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0473 425 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 332 - -
Mch1g0473 425 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Mch1g0473 425 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020(InterPro)
Mch1g0473 425 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020(InterPro)
Mch1g0473 425 PANTHER WAT1-RELATED PROTEIN 19 363 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0473 Mch-Chr1:9178636 Mch1g0746 Mch-Chr1:11284866 3.73E-115 dispersed
Mch4g1885 Mch-Chr4:21532686 Mch1g0473 Mch-Chr1:9178636 2.26E-77 transposed
Mch1g0473 Mch-Chr1:9178636 Mch5g1316 Mch-Chr5:14029411 3.93E-159 wgd
Mch1g0473 Mch-Chr1:9178636 Mch9g1707 Mch-Chr9:19031676 5.95E-152 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0473 - - - 0.0