Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0570 ATGCTCAAGCGCCCCGGTAAGCAGCAGTCGGAATCCTTGTCCAACAAGATCTACAGATTCAGAGGGGTGTTGCTCCTCACCTCTCTCTCGCTTTTCCTCATCGCCTTCATTCTCTATCTCATGCCTGCTCGAGAGGATTACTCCTTCAACCACCGCAAAGTTGCCCCCGATCACAGGTCGTCCTCTTCCAAGACCACTTATGCCGTTATTTTTGATGCTGGCAGCTCTGGGAGCCGCGTTCATGTCTTTTGCTTCGACCACCATCTCGATCTCCTCCCCATTGGCAAGGATATCGAACTTTTCGATCAACTTAAACCAGGACTGAGTGCCTATCCCGACAATCCTAAGAAAGCTGCAGATTCTCTAATTTCCCTTTTGGAAAAAGCACAAAGCGTGGTTCCAAAAGGGTTGCGGCAAATGACCCCTGTTAGAGTTGGGGCAACTGCAGGCCTGAGGGCTCTGAAAGGTGATGCATCTGAAAGAATTTTGCAGGCGGTTAGGGATCTCCTGAGAGACAAAAGTGACCTCAAGTTGGAGGGAGATGGTGTGTCTGTAATTGATGGAACTCAAGAGGGTTCTTATCAGTGGGTGACAATAAACTATCTGCTTGGGAACTTGGGTAAGAAATATTCAGATACAGTTGGAGTTGTAGATCTTGGGGGAGGATCTGTTCAAATGGCATATGCTATCTCAGAGAAGGATGCTGCTCGATTATCAGATGCAGAGGGCGCATATATTAAAAAAATGTTTCTGAAGGGAGTAACTTATTATCTCTACGTTCACAGTTATTTGCATTATGGGTTACTGGCTGCTCGAGCAGAGGTTTTGAGCGTCTCTGAAGACTCTAGCAATGATTGCATCCTATCTGGCCATGATGGAACATACCGTTACGGTGGACAGGACTACAAAGCATCAGCCTCTCCGTCAGGCTCTAGCTTGAATGGATGCAGGAGGACAGTTTTGAAGGCTCTCAAGGTAAATGAATCAACATGTACTCACATGAAGTGCACTTTTGGTGGCGTTTGGAACGGTGGAGGAGGGGATGGGCAGAAAAATCTCTTCGTCGCTTCGTTTTTCTTCGACCGGGCTGCTGAGGCTGGTTTTGCTGATCCCAATAAGCCGATTGCTAAAGTTCACCCTTCAGACTTCGAGGAGGCAGCGAAGCGGGCATGCCATATCAAATCCGAGGACGCCAGTACATATCCCAATGTCGAGAAGGATAACCTGCCGTACTTGTGTATGGATCTTGTATACCAGTACACACTACTCGTAGATGGATTTGGTCTGGATCCTTGGCAAGAGATCACATTGGTGAAGAAGGTTAAGTATCAGAATTCCTTGGTTGAAGCAGCATGGCCTCTAGGCAGCGCCATTGAAGCTGTCTCGTCGTTAGCCTAA 1398 47.71 MLKRPGKQQSESLSNKIYRFRGVLLLTSLSLFLIAFILYLMPAREDYSFNHRKVAPDHRSSSSKTTYAVIFDAGSSGSRVHVFCFDHHLDLLPIGKDIELFDQLKPGLSAYPDNPKKAADSLISLLEKAQSVVPKGLRQMTPVRVGATAGLRALKGDASERILQAVRDLLRDKSDLKLEGDGVSVIDGTQEGSYQWVTINYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISEKDAARLSDAEGAYIKKMFLKGVTYYLYVHSYLHYGLLAARAEVLSVSEDSSNDCILSGHDGTYRYGGQDYKASASPSGSSLNGCRRTVLKALKVNESTCTHMKCTFGGVWNGGGGDGQKNLFVASFFFDRAAEAGFADPNKPIAKVHPSDFEEAAKRACHIKSEDASTYPNVEKDNLPYLCMDLVYQYTLLVDGFGLDPWQEITLVKKVKYQNSLVEAAWPLGSAIEAVSSLA 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9913272 9918093 + MC01g0322 Mch1g0570 675462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0570 465 Gene3D Exopolyphosphatase. Domain 2 187 442 - -
Mch1g0570 465 Pfam GDA1/CD39 (nucleoside phosphatase) family 61 463 IPR000407 GO:0016787(InterPro)
Mch1g0570 465 CDD NBD_sugar-kinase_HSP70_actin 69 249 - -
Mch1g0570 465 Gene3D - 67 458 - -
Mch1g0570 465 FunFam Apyrase 1 187 442 - -
Mch1g0570 465 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 19 461 IPR000407 GO:0016787(InterPro)
Mch1g0570 465 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 186 201 IPR000407 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1353 Mch-Chr11:9672293 Mch1g0570 Mch-Chr1:9913272 2.85E-180 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0570 K14641 - csv:101220305 809.29