Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0582 ATGGCTGCCTACGCTTTGCTTGGCGACTCTAATCTCCATGTTAATGGCGGTTACGATAATAGTCCGTTAACGAGCGCCTCCACGAACAGCAACGGCAGCGAAGAACAGGCTCAAGTTCAGGCTCAGGTTCAACCGCGGAAAATGGTGCGGAAGAGAATCGCGTCGGAGATGGAGATCGAAGCTATCAACGGGAACAACGGCGGCGTCGGCGTCGGCGTGGTGGTTCATCCTCGGTTTTTCCGGCGGAGTGGTTCTTCGGATCGTCCTTTTGAGAAGAATAAGGCGTATTCTTCAAACCCTAGCCATGGCGCCAACCACTCCACTGTTCTTCAGAATTTAACCGCCCTGACGTCAGTAGTAATCGAAGGGTCAAATTTATCGTCTGCTTCTGCTTCTGCTGTTGCTGATGCTGCTACGGCCACCACCATTACCACTACCTCCAACAACTCAACTCTTATCGATAGTACTCTTCCTCCAGTTCTTCGTGCTCAGCCCCACCACCAGCATCATCATCTGCAGAATCCTGCAGTCTGCGGGTTCTCTGGTTTGCCCTTGTTCCCACCAGAATCAAATCATAAGTTAAATACTCGCAATAATCCCTTTCCCCTTCCTAATCCATGTCAGGTTCATAATAATCCTCCGGCCACCGCCACGACGACCTCCATTATCGCCGCCGCTTCCCCCATGGACGACTCCTCCGCCACCGCTTGGATCGACGGCATCATCAAAGACCTAATCCACAGCTCCACCGCCATCTCCATCCCTCAGCTTATTCACAACGTTCGTGAGATTATTTATCCTTGTAACCCCAATCTTGCCAATCTCCTTGAGTTTCGCCTCCGTACTCTTACGGACCCTAATATCCCTAACTTCGCCGCTGAGGTCAGGAAATCCCCCTTGCCGTTGCCGCCTCCGGCGCCGGTGGCCGGCTTGGGGCTGCAGCAGAGGCAGTTCGGTCAAGAGCATGATCAGCAAGAGCCGGATTGTTCTGGTTTGAAGCTTAATCTCGATTCTTCATCTCTTCATAATCTTTCTAATTTCCCCCCTCAGCCGCCGTATCAAGAATCGTATCTTCACTGGGGAGCTGCCCCTCCGCCGGTTCCCCCGCCCTCTGCCGCCGGCGAGGAAGCCCTCCAACGGCTCCCCGTTCATCATCAGCTTAATCTCTCTTCTATTACACCGTCGTCAGTTGTTTCTCTAAACCATGTCGCTTCGAAGCAACAACCAGAACAGCAGAACTCCTGTCCGGTCAAGGCGGCGGCGGCGCCGCCCCCGCCGCCCAGTGCGACGGGGAATAATCCTTCAACCACTGCTTTGCTGATTAGAGAGATTAAAGAGGAGATGAGGCAACAAAAACGAGATGAAGAAGGATTACACCTCTTGACTTTGCTTCTTCAATGTGCAGAAGCCGTCTCTGCCGATAATTTGGAAGAAGCCAACAAAATGCTCTTGGAAATCTCCGAGCTCTCGACGCCGTTTGGAACGTCGGCGCAGAGGGTGGCGGCGTACTTCTCGGAAGCAATGTCCGCGAGGCTGGTGAGCTCCTGCTTAGGAATTTACGCGGCTCTGCCGCCGGCGTTGGTGCCCCATTCGCACACCCAGAAGATAGCTTCGGCTTTTCAGGTCTTCAATGGCATAAGCCCCTTCGTCAAATTCTCCCACTTTACGGCGAATCAAGCCATTCAAGAAGCTTTCGAGGGGCAGGAGAGGGTTCACATTATAGATCTGGACATCATGCAGGGGCTTCAATGGCCGGGTCTGTTCCACATTCTGGCGTCTCGGCCCGGCGGGCCACCGTACGTCCGCCTCACCGGACTTGGGACGTCTCAGGAGGTTCTTGAGGCCACCGGAAAACGCCTCACAGAATTCGCCGAGAAGCTTGGTCTTCCCTTTGATTTCTTTCCGGTGGCTGAAAAAATTGGTAATCTGGACTTGGAGAAGCTCAATGTTAGCAAAAGGGAAGCCGTCGCCGTCCATTGGATGCAGCATTCTCTTTATGAAGTCACTGGGTCTGATTCCAACACGCTATGGCTTTTGCAGAGATTGGCCCCAAAAGTGGTGACGGTGGTGGAACAAGACCTGAGCCATACAGGCTCCTTCTTGGGCAGATTCGTGGAGGCCATCCACTACTACTCGGCCCTGTTCGACTCACTGGGCGTGAGCTACGGCGAGGAGAGCGAGGAGAGGCATTTGGTGGAGCAGCAGCTGCTGTCAAGGGAGATCCGGAACGTGCTGGCCGTCGGCGGGCCGTCGAGGAGCGGCGAGGTGAAGTTCCAGAACTGGAGAGAGAAGCTGCAGCAATCTGGGTTCAAGGGCATCTCTCTCGCCGGAAACGCCGCAACTCAGGCGACCCTCCTCCTTGGAATGTTCCCCTCCGACGGGTACACTCTTGTTGAAGATAATGGGACTCTGAAACTCGGGTGGAAGGATCTGTGCTTGCTCACGGCCTCTGCTTGGAAGCCGCCGTTTCATCATGCAGCCACCAACCATATTCCCCGGTACTGA 2505 54.33 MAAYALLGDSNLHVNGGYDNSPLTSASTNSNGSEEQAQVQAQVQPRKMVRKRIASEMEIEAINGNNGGVGVGVVVHPRFFRRSGSSDRPFEKNKAYSSNPSHGANHSTVLQNLTALTSVVIEGSNLSSASASAVADAATATTITTTSNNSTLIDSTLPPVLRAQPHHQHHHLQNPAVCGFSGLPLFPPESNHKLNTRNNPFPLPNPCQVHNNPPATATTTSIIAAASPMDDSSATAWIDGIIKDLIHSSTAISIPQLIHNVREIIYPCNPNLANLLEFRLRTLTDPNIPNFAAEVRKSPLPLPPPAPVAGLGLQQRQFGQEHDQQEPDCSGLKLNLDSSSLHNLSNFPPQPPYQESYLHWGAAPPPVPPPSAAGEEALQRLPVHHQLNLSSITPSSVVSLNHVASKQQPEQQNSCPVKAAAAPPPPPSATGNNPSTTALLIREIKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAALPPALVPHSHTQKIASAFQVFNGISPFVKFSHFTANQAIQEAFEGQERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSQEVLEATGKRLTEFAEKLGLPFDFFPVAEKIGNLDLEKLNVSKREAVAVHWMQHSLYEVTGSDSNTLWLLQRLAPKVVTVVEQDLSHTGSFLGRFVEAIHYYSALFDSLGVSYGEESEERHLVEQQLLSREIRNVLAVGGPSRSGEVKFQNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWKPPFHHAATNHIPRY 834
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10016607 10020694 - MC01g0332 Mch1g0582 675474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0582 834 MobiDBLite consensus disorder prediction 403 434 - -
Mch1g0582 834 ProSiteProfiles GRAS family profile. 451 820 IPR005202 -
Mch1g0582 834 Pfam GRAS domain family 461 820 IPR005202 -
Mch1g0582 834 MobiDBLite consensus disorder prediction 355 374 - -
Mch1g0582 834 MobiDBLite consensus disorder prediction 82 103 - -
Mch1g0582 834 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 443 819 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009630(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0048366(PANTHER)|GO:0051457(PANTHER)|GO:0090610(PANTHER)
Mch1g0582 834 MobiDBLite consensus disorder prediction 18 38 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0967 Mch-Chr10:6898036 Mch1g0582 Mch-Chr1:10016607 6.12E-160 dispersed
Mch1g0582 Mch-Chr1:10016607 Mch4g2611 Mch-Chr4:26368287 1.28E-93 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42678 PF03514 GRAS 9.40E-127 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0582 K27742 - csv:101205286 1229.54