Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0587 ATGGACAAGTACGAGAAGCTTGAAAAGGTCGGCGAAGGAACCTACGGGAAGGTGTACAAGGCGAAGGACAAGGAGAGCGGCCAACTCGTCGCTCTCAAGAAAACTCGCCTCGAAATGGACGAAGAAGGCGTTCCACCCACTGCTCTTCGCGAGGTTTCTCTTCTCCAGTTGCTCTCTCAGTCCCTCTACGTCGTTCGTCTCCTCTGCGTCGAGCACGTCCACCACCACAAGAGTGGTAAGCCGCTCCTCTACCTTGTATTTGAGTATCTTGACACCGATCTCAAGAAGTTCATCGATTCGCATCGCAAGGGCCCCAATCCTCGCCCTCTTCCCTCCTCCCTTATCCAGAGCTTCCTGTTTCAGCTCTGTAAGGGCGTTGCCCACTGTCATAGCCATGGCGTTCTCCATCGCGATCTCAAGCCGCAGAATCTTCTTCTCGATCAGGCCAAGGGCGTCTTGAAGATTGCCGATCTTGGCCTTGGCCGCGCTTTTACGGTTCCTCTTAAGAGCTACACTCACGAGATTGTTACTCTCTGGTACCGTGCTCCTGAGGTCCTCCTTGGATCCACTCATTACTCCACTGCTGTCGATATGTGGTCCGTCGGCTGCATCTTCGCCGAAATGGTGAGAAGACAGGCCCTGTTCCCGGGAGATTCGGAGTTCCAGCAGTTGCTTCACATTTTTAGGCACGTATTTTTCTTTCACTTTGTTTCAGTCGTAGTGCTGCTTGGTACCCCAACCGAGAAACAGTGGCCTGGCGTTAGTTCTCTCCGGGATTGGCATGTCTATCCTCAATGGGAACCTCAGAATCTGACACGTGCAGTTCCATCTCTGGAACCAGAGGGTGTTGACCTTCTCTCGAAAATGCTTCAATACAATCCTGCAGACAGAATCTCAGCGAAAGCAGCACTAGACCACCCTTATTTCGACAACATTGACAAGTCTCAGTATTAG 954 51.89 MDKYEKLEKVGEGTYGKVYKAKDKESGQLVALKKTRLEMDEEGVPPTALREVSLLQLLSQSLYVVRLLCVEHVHHHKSGKPLLYLVFEYLDTDLKKFIDSHRKGPNPRPLPSSLIQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQAKGVLKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRHVFFFHFVSVVVLLGTPTEKQWPGVSSLRDWHVYPQWEPQNLTRAVPSLEPEGVDLLSKMLQYNPADRISAKAALDHPYFDNIDKSQY 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10075525 10078759 + MC01g0336 Mch1g0587 675479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0587 317 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524(InterPro)
Mch1g0587 317 FunFam Cyclin-dependent kinase B2,2 1 91 - -
Mch1g0587 317 ProSiteProfiles Protein kinase domain profile. 4 309 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g0587 317 SUPERFAMILY Protein kinase-like (PK-like) 1 312 IPR011009 -
Mch1g0587 317 Pfam Protein kinase domain 4 309 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g0587 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g0587 317 PANTHER CELL DIVISION PROTEIN KINASE 3 309 IPR050108 GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER)
Mch1g0587 317 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Mch1g0587 317 FunFam Cyclin-dependent kinase 2 93 316 - -
Mch1g0587 317 SMART serkin_6 4 309 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g0587 317 Gene3D Transferase(Phosphotransferase) domain 1 93 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0029 Mch-Chr11:216462 Mch1g0587 Mch-Chr1:10075525 8.34E-148 dispersed
Mch1g0587 Mch-Chr1:10075525 Mch9g1849 Mch-Chr9:20279464 2.50E-114 dispersed
Mch1g0587 Mch-Chr1:10075525 Mch9g2347 Mch-Chr9:23460276 5.25E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77104 PF00069 Pkinase 1.70E-65 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0587 K07760 - csv:101204557 577.015