Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0608 ATGGAAGATAATTACGATTACGATCACGATCGCGATCATCGACTTCTTCCTCCTCTTCGTCGGCTTCAGCGAATCGGCGGTAATGCGGAGGCGGCGGAGGGGCGGTTCCCGCCGTGGAGCGTGGAGGAGACGAAGGAGCTGCTTTGGATCAGAGCGGAGCTGGACAGAAGTTTCTCCGAAATTAAACACAATCGGCTGCTTTGGATTTCCGTCGCCGGAAGAATGAAGGCCAGAGGCTTCAATCGGAGCGACGAGCAGTGTAAGTGCAAGTGGAAAAATCTCGTCACTCGTTATAAGGGTTGTGAAACCATGGATCCCAAAGCTCCAAAGCAACAATTTCCATTCTACAACGACCTCCACGCCATTTTCGCCGCAAGGATGCAGAGAAACTGGTGGATCGAAGCCGAAGATCAATCAAGAGGCTCCAAAAGGAAAGCCACCGAGCAATTCTCCAGCGAAGATCCAAATGACGATGGTGGCGAAGAAGGCAAAGACGACGAAGACAAAGCATTCACCTCAACAAGAACGACGAAAAGGACGATAAAGAATGGCGAGAAATGGAGGAGAGCGAAGGATGAGGAGAGTAGTAATTTGAAGGAAATATTGAAGATTTTTGTGAAGAGAGAGATGGAAATGGAGAGGCAATGGAGGGAAGCATTTAGGGTTAGAGATGAGGAGAGAAGGTTGAAGGAGATGGAATGGAGGATGAATATGGAAGCCCTAGAGAGAGAGAGGATGATGATGGAGATGATTTGGAGAGAGAAAGAGGACGAGAGAAGAGAGAGAGAGGAAGCTAGGGCTCAGAACAGAGATGCATTGATCTCAGCTTTGTTCAACAGGCTCGTAAGATAA 852 48.59 MEDNYDYDHDRDHRLLPPLRRLQRIGGNAEAAEGRFPPWSVEETKELLWIRAELDRSFSEIKHNRLLWISVAGRMKARGFNRSDEQCKCKWKNLVTRYKGCETMDPKAPKQQFPFYNDLHAIFAARMQRNWWIEAEDQSRGSKRKATEQFSSEDPNDDGGEEGKDDEDKAFTSTRTTKRTIKNGEKWRRAKDEESSNLKEILKIFVKREMEMERQWREAFRVRDEERRLKEMEWRMNMEALERERMMMEMIWREKEDERREREEARAQNRDALISALFNRLVR 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10261567 10264378 - MC01g0354 Mch1g0608 675500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0608 283 Coils Coil 255 275 - -
Mch1g0608 283 ProSiteProfiles Myb-like domain profile. 38 95 IPR001005 -
Mch1g0608 283 MobiDBLite consensus disorder prediction 142 177 - -
Mch1g0608 283 PANTHER FI21293P1 30 282 - -
Mch1g0608 283 Pfam Myb/SANT-like DNA-binding domain 38 122 IPR044822 -
Mch1g0608 283 FunFam Zinc finger and SCAN domain-containing 20 39 100 - -
Mch1g0608 283 CDD GT1 39 102 - -
Mch1g0608 283 Gene3D - 39 100 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0917 Mch-Chr10:6500312 Mch1g0608 Mch-Chr1:10261567 4.73E-28 transposed
Mch1g0608 Mch-Chr1:10261567 Mch5g1945 Mch-Chr5:19382056 1.82E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42679 PF13837 Myb_DNA-bind_4 1.50E-18 CL0123 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0608 - - - 0.0