Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch1g0608 | ATGGAAGATAATTACGATTACGATCACGATCGCGATCATCGACTTCTTCCTCCTCTTCGTCGGCTTCAGCGAATCGGCGGTAATGCGGAGGCGGCGGAGGGGCGGTTCCCGCCGTGGAGCGTGGAGGAGACGAAGGAGCTGCTTTGGATCAGAGCGGAGCTGGACAGAAGTTTCTCCGAAATTAAACACAATCGGCTGCTTTGGATTTCCGTCGCCGGAAGAATGAAGGCCAGAGGCTTCAATCGGAGCGACGAGCAGTGTAAGTGCAAGTGGAAAAATCTCGTCACTCGTTATAAGGGTTGTGAAACCATGGATCCCAAAGCTCCAAAGCAACAATTTCCATTCTACAACGACCTCCACGCCATTTTCGCCGCAAGGATGCAGAGAAACTGGTGGATCGAAGCCGAAGATCAATCAAGAGGCTCCAAAAGGAAAGCCACCGAGCAATTCTCCAGCGAAGATCCAAATGACGATGGTGGCGAAGAAGGCAAAGACGACGAAGACAAAGCATTCACCTCAACAAGAACGACGAAAAGGACGATAAAGAATGGCGAGAAATGGAGGAGAGCGAAGGATGAGGAGAGTAGTAATTTGAAGGAAATATTGAAGATTTTTGTGAAGAGAGAGATGGAAATGGAGAGGCAATGGAGGGAAGCATTTAGGGTTAGAGATGAGGAGAGAAGGTTGAAGGAGATGGAATGGAGGATGAATATGGAAGCCCTAGAGAGAGAGAGGATGATGATGGAGATGATTTGGAGAGAGAAAGAGGACGAGAGAAGAGAGAGAGAGGAAGCTAGGGCTCAGAACAGAGATGCATTGATCTCAGCTTTGTTCAACAGGCTCGTAAGATAA | 852 | 48.59 | MEDNYDYDHDRDHRLLPPLRRLQRIGGNAEAAEGRFPPWSVEETKELLWIRAELDRSFSEIKHNRLLWISVAGRMKARGFNRSDEQCKCKWKNLVTRYKGCETMDPKAPKQQFPFYNDLHAIFAARMQRNWWIEAEDQSRGSKRKATEQFSSEDPNDDGGEEGKDDEDKAFTSTRTTKRTIKNGEKWRRAKDEESSNLKEILKIFVKREMEMERQWREAFRVRDEERRLKEMEWRMNMEALERERMMMEMIWREKEDERREREEARAQNRDALISALFNRLVR | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 10261567 | 10264378 | - | MC01g0354 | Mch1g0608 | 675500 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch1g0608 | 283 | Coils | Coil | 255 | 275 | - | - | |
Mch1g0608 | 283 | ProSiteProfiles | Myb-like domain profile. | 38 | 95 | IPR001005 | - | |
Mch1g0608 | 283 | MobiDBLite | consensus disorder prediction | 142 | 177 | - | - | |
Mch1g0608 | 283 | PANTHER | FI21293P1 | 30 | 282 | - | - | |
Mch1g0608 | 283 | Pfam | Myb/SANT-like DNA-binding domain | 38 | 122 | IPR044822 | - | |
Mch1g0608 | 283 | FunFam | Zinc finger and SCAN domain-containing 20 | 39 | 100 | - | - | |
Mch1g0608 | 283 | CDD | GT1 | 39 | 102 | - | - | |
Mch1g0608 | 283 | Gene3D | - | 39 | 100 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0917 | Mch-Chr10:6500312 | Mch1g0608 | Mch-Chr1:10261567 | 4.73E-28 | transposed | |
Mch1g0608 | Mch-Chr1:10261567 | Mch5g1945 | Mch-Chr5:19382056 | 1.82E-54 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42679 | PF13837 | Myb_DNA-bind_4 | 1.50E-18 | CL0123 | Mch | TF |
Pathway information
