Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch1g0660 | ATGGCTGAAGAACTGCAAGTGTTTGGTTTCTGGACCAGTCCTTTTAGTCGCAGAGTGGAGCTGGCTCTCAAGCTCAAAGCCTTGGAATATGAATATGTTGAAGAAGATTTAAGGAACAAGAGCGATTTGCTTGTAAAATACAACCCAATTTACAAGAAAGTGCCTGTGCTCCTCCACCATGGAAAACCCATCGCAGAGTCTCTTGTAATCCTCGAATACATCGAAGATACCTGGAAATCCAACCCCATGTTCCCCCAACATCCCCATGGAACAGCTCTTGCCAGGTTCTGGGCTAAGTACATAGATGACAAGGTTGTGCCGGCAGTACTGAAAGCTGCTTTTAGTAAAGGAGAGGGAAAGGAGAAGGCTGTAGAACAAGTGTGGGAGACTTTGGAGCCACTGGAGAAGGAGATTGATGGGAAGAGGTTTTTTGGAGGAGACAGAATTGGGTTTGTGGACATTGTGGGCATTTTTGTAGGCTACTGGGTTCCTGCTATTGAAGAAAGTTTTGGGATTGAGCTGCTAAGAAGTGACAAATTTCCAAAACTAAGCAAATGGGTTCAAGAGCTTGTGAACCACAGCCTCGTGAAGGAGGTGTTTGGTTTCTGGGAAAGTGCGTACAGTCGCAGAGTGGAGTTGGCTCTCAAACTCAAAGCCGTGGAGTACCAATACATTGAGGAAGATTTGCCACACAACAAGAGCGATTTGCTTCTCAGATACAACCCAATTTACAAGAAAGTCCCTGTTCTCCTCCACCATGGAAAACCCATCGCAGAGTCTCTTGTCATCCTCCAATACATCGAAGATACTTGGAAGGCCAACCCCATGTTGCCTCAACACCCCCATCAACGAGCTCTCGCCAGGTTCTGGGCTAAGTACATCGATGACAAGGTTGTGGGTGCGGTGGTGAAAGCTGCTGTAAGCAAAGGAGAGGAGAGAGAGAAGGCAGTAGAGGAAGCGAGGGAGGCGTTGGAAGAACTTGAGAAAGAGCTTAAAAGCAAGAAATTCTTTGGAGGACACAATATTGGGTTTGTGGACATTGTTGGCACCATCGTAGCCCACTGGGTTCCAGCCATTGAACAAAGTTTTGGGTTTGAGGTCCTCAAAGCTCACAACTTTCCAAATCTAACCAAATGGAGTGAAGAACTTGCAAACAGCCTGGTGAAGCAGGTTCTGCCCCCACAACATGAAATTGTTGCCTTCATGGAATCAGCTTGGTCAAATTAG | 1227 | 46.54 | MAEELQVFGFWTSPFSRRVELALKLKALEYEYVEEDLRNKSDLLVKYNPIYKKVPVLLHHGKPIAESLVILEYIEDTWKSNPMFPQHPHGTALARFWAKYIDDKVVPAVLKAAFSKGEGKEKAVEQVWETLEPLEKEIDGKRFFGGDRIGFVDIVGIFVGYWVPAIEESFGIELLRSDKFPKLSKWVQELVNHSLVKEVFGFWESAYSRRVELALKLKAVEYQYIEEDLPHNKSDLLLRYNPIYKKVPVLLHHGKPIAESLVILQYIEDTWKANPMLPQHPHQRALARFWAKYIDDKVVGAVVKAAVSKGEEREKAVEEAREALEELEKELKSKKFFGGHNIGFVDIVGTIVAHWVPAIEQSFGFEVLKAHNFPNLTKWSEELANSLVKQVLPPQHEIVAFMESAWSN | 408 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 10682293 | 10685156 | - | MC01g0400 | Mch1g0660 | 675552 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch1g0660 | 408 | SFLD | Main (cytGST) | 199 | 403 | - | - | |
| Mch1g0660 | 408 | Pfam | Glutathione S-transferase, C-terminal domain | 96 | 192 | IPR004046 | - | |
| Mch1g0660 | 408 | Pfam | Glutathione S-transferase, C-terminal domain | 301 | 385 | IPR004046 | - | |
| Mch1g0660 | 408 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 280 | 402 | IPR010987 | - | |
| Mch1g0660 | 408 | SFLD | Glutathione Transferase (cytosolic) | 2 | 199 | IPR040079 | - | |
| Mch1g0660 | 408 | CDD | GST_N_Tau | 199 | 271 | - | - | |
| Mch1g0660 | 408 | SUPERFAMILY | Thioredoxin-like | 199 | 276 | IPR036249 | - | |
| Mch1g0660 | 408 | Pfam | Glutathione S-transferase, N-terminal domain | 199 | 268 | IPR004045 | - | |
| Mch1g0660 | 408 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 75 | IPR004045 | - | |
| Mch1g0660 | 408 | FunFam | Tau class glutathione S-transferase | 277 | 408 | - | - | |
| Mch1g0660 | 408 | SUPERFAMILY | GST C-terminal domain-like | 269 | 404 | IPR036282 | - | |
| Mch1g0660 | 408 | CDD | GST_C_Tau | 88 | 199 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
| Mch1g0660 | 408 | SFLD | Main.3: Omega- and Tau-like | 2 | 199 | IPR045073 | - | |
| Mch1g0660 | 408 | SFLD | Main.3: Omega- and Tau-like | 199 | 403 | IPR045073 | - | |
| Mch1g0660 | 408 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 199 | 403 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
| Mch1g0660 | 408 | FunFam | Tau class glutathione S-transferase | 1 | 86 | - | - | |
| Mch1g0660 | 408 | CDD | GST_C_Tau | 281 | 402 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
| Mch1g0660 | 408 | Gene3D | - | 86 | 196 | - | - | |
| Mch1g0660 | 408 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
| Mch1g0660 | 408 | Gene3D | Glutaredoxin | 197 | 276 | - | - | |
| Mch1g0660 | 408 | FunFam | Tau class glutathione S-transferase | 192 | 279 | - | - | |
| Mch1g0660 | 408 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 195 | 275 | IPR004045 | - | |
| Mch1g0660 | 408 | FunFam | Tau class glutathione S-transferase | 84 | 212 | - | - | |
| Mch1g0660 | 408 | SUPERFAMILY | GST C-terminal domain-like | 76 | 203 | IPR036282 | - | |
| Mch1g0660 | 408 | Gene3D | - | 277 | 407 | - | - | |
| Mch1g0660 | 408 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
| Mch1g0660 | 408 | SUPERFAMILY | Thioredoxin-like | 5 | 106 | IPR036249 | - | |
| Mch1g0660 | 408 | Coils | Coil | 307 | 337 | - | - | |
| Mch1g0660 | 408 | CDD | GST_N_Tau | 5 | 78 | - | - | |
| Mch1g0660 | 408 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 87 | 217 | IPR010987 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g1004 | Mch-Chr10:7190097 | Mch1g0660 | Mch-Chr1:10682293 | 3.24E-87 | dispersed | |
| Mch1g0660 | Mch-Chr1:10682293 | Mch1g0663 | Mch-Chr1:10697689 | 1.70E-92 | dispersed | |
| Mch9g2184 | Mch-Chr9:22449371 | Mch1g0660 | Mch-Chr1:10682293 | 1.21E-06 | dispersed | |
| Mch1g0660 | Mch-Chr1:10682293 | Mch1g0661 | Mch-Chr1:10686209 | 9.59E-171 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch1g0660 | K00799 | - | csv:105435246 | 284.648 |