Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0697 TATCCCTACAGAGAACTCGAAAAAGCTACTAGACGTTTCAGTGAGAGGGAGCTTCTCGGGCAGGGTGGATTCGGGAAAGTTTACAGAGGAATTCTTCCGATTTCAAAAACCGACGTCGCCGTCAAACGAATCTCCCACGATTCGAAACAGGGTCTCCGGGAATTCGTGACGGAAATCTCCACAATCGGCATGCTCCGGCACCGGAATCTGGTTCAGTTGCTCGGATGGTGTCGCCGGCGGCAGGATCTGCTTCTCGTTTACGAATTCATGGCGAATGGGAGCTTGGATAAATACCTATTCGACGACCCGAAATCGACTCTGAATTGGGAGCAGAGATTTAGGGTTCTAAAGGGCGTGGCCTCTGCTCTTCTCTACCTCCACGAGGGGTACGAACGGGTGGTGATTCACAGAGACGTGAAGGCGAGCAATGTGCTGTTAGACGGCGAATTGAAGGGGAGATTGGGGGATTTCGGGCTCGCTAGGGTTTACGAACACGGGTCGGATCCGGATACGACCCGGGTGGTGGGGACTTTGGGGTATGTGGCGCCGGAGCTGCCGAGGACGGGGAAGGCGACGACGAGCTCCGACGTGTACGCATTCGGGGCGGTGATGCTGGAGGTGGCGTGCGGGCGGCGGCCAGTGGAGGTGAAGGCGTTGCCGGAGGAGATGACGTTGGTGGATTGGGTGTGGGAGAAATTCAGAGAAGGGAGGGTTTTGGACGCCGTGGATCCGAAGCTCCAGGGAGATTACGACGAGATTGAGGCGGCGATGGTGTTGAAATTGGGAGTCATGTGTTCCAATAATGAGCCGAAGCAGCGGCCGAGTATGAGGCAGGTTGTGCGGTGCTTGGACGGCGAAATCGGCGTCACCGACGAGTGGAAGGCGCCGGGTGGCGGCGGCATTAACAGATGTGCGGCGGGGGATTTTCTTATCTCGTTCACGTCTACGTCGATGAGCGAAGAAAGCTCTTTTAACAAGGGAATAATTAGTTATAAATTTAGTTTAAATTATAAGCCTAACGGCTCCAAAATTTTGTTAGCATTTGAACTCAACTGCCAACGCAAGCCCAAAACTCTGAGCTGTTTCACCTTCATGGCTTCAACTTTCCTCATTTTCTTTCTCATTTCTGCAAATTTTCTATTCATCCGAACACAATCCCAGTTCGAGGATCAGCTCTTCCATGCCGGATTCGCAGATGGAGACTCGGAGATGTCGTTTGACAAGGCAGCCCGGATTCAGAAAAATGGAATCTTGACATTAATAGACCACTCAGCAAGATTATCATACGGGCACGCCTTCCACAAATTCCCTTTCCAGTTCAGAAACTCCTCCAATGGCAGAGCTTTCTCTTTCTCCACTACTTTTGCCTTCATCGTCATCCCTGAAGCTCCCAATTTCTGCGGCTCTGGCTTCACTTTCGCCATAGCACCTTCCCCGAGCTTTGTGGGTCTTCCTAGAGAGTATTTGGGTCTTCCCAATTTCACCCAAAATGGCAATTTCTCCAAACATCTCTTCGCCGTCGAATTCGACACGTTTCAAGACTCCCGTTTCCAAGATATCGACGGCAACCACATCGGCGTCGATATCGGCAGCTTCGTCTCCAAAGCAGCCATCGCCGCCGCCTATTTCTCCGACGACGGCGGAAGGAAGCAGGAGCTGGTTCTGACAAGTGGGAAGGTAATCAAAGCTTGGATTGACTACGATTCCACCCAAAATTCTCTCAGTGTCTCGATTTCGCCCCATAATTCAAAACCCAGAAAGCCGATTCTGTCGTATAAAGTCGATCTGTCGCCGATTCTTAAAGATCATATGTTCGCCGGATTCTCTGCCTCCACCGGCTTGTACACTAGTTCCCAATTGATTTTGGGTTGGAGCTTCATGATGAACGGCCAAGCTCGAGATTTCGATCTTTCTTCTCTTCCTTCGCCCTTCAAGAAACGGTCTGGTAAATCAATAATCAGAGCCTCTGTTTTAGCGGCAATTCTCGCAATTTCGGTGATTTCTGTTGCTGTTTACATAATCAAATCGATAACCGATTTCGATCGAATTGAGTCGTGGGAGTTTCAATTAGGCCCACATCGGTACTCCTACAGAGAGCTCCACCGCGCCACCAGAGGATTCAGAGACAAGGAGCTCCTCGGCCATGGCGGATTCGGCAAGGTTTACAGAGGAATCCTCCCGAATTCCAAAACCCAAATCGCCGTTAAGCGAATTTCGAACGAATCCAAACAGGGCCTTCGCGAATTCGTCTCCGAAATCGCCACCATCGGTCTACTCCGCCACCGGAATTTGGTCCAATTGCTCGGATGGTGCCGCCGCCGGAGCGATCTTCTTCTGGTCTACGATTTTATGGCGAATGGAAGCTTGGATAATTACCTATTCGACAACCCGAAAACGATTCTGAATTGGAAACAGAGGATCAAAATTATAAAGGACATCGCCTCTGCTCTGCTTTATCTCCACGAAGGGTACAAACACGTGGTGATTCACAGAGACGTGAAGGCGAGCAATGTGTTATTAGACGGCGAATTGAACGGGAAATTGGGGGATTTCGGGCTCGCGAAAGTGTACGAACACGGGTCGGATCCGAATACGACCCGGGTCGTGGGGACTTTGGGGTACGTGGCGCCGGAGCTGGCAAGGACGGGGAAATCGACGACAATGTCTGACGTTTACGCGTTCGGGGGGCTGATGCTGGAAGTGGCGTGCGGGCGGCGGCCGGTGGAGGTGAAGGCGTTGCCGGAGGAGATGGTGTTGGTGGATTGGGTGCAGGAGAAATACAGAGAGGGGAAGCTTATGGAAGTGGTGGATCCGAAGCTTGGTGGGGAATTTGAGGAAACTGAAATGGCGGTGGTGTTGAAAATGGGGGTTATGTGTTCGGCGGTGGAGGCGGAGCGGCGGCCGAGTATCCGGCAGGTGGTGCGGTGTTTGGACGGCGAAATTGGGGTCGCC 2952 52.03 YPYRELEKATRRFSERELLGQGGFGKVYRGILPISKTDVAVKRISHDSKQGLREFVTEISTIGMLRHRNLVQLLGWCRRRQDLLLVYEFMANGSLDKYLFDDPKSTLNWEQRFRVLKGVASALLYLHEGYERVVIHRDVKASNVLLDGELKGRLGDFGLARVYEHGSDPDTTRVVGTLGYVAPELPRTGKATTSSDVYAFGAVMLEVACGRRPVEVKALPEEMTLVDWVWEKFREGRVLDAVDPKLQGDYDEIEAAMVLKLGVMCSNNEPKQRPSMRQVVRCLDGEIGVTDEWKAPGGGGINRCAAGDFLISFTSTSMSEESSFNKGIISYKFSLNYKPNGSKILLAFELNCQRKPKTLSCFTFMASTFLIFFLISANFLFIRTQSQFEDQLFHAGFADGDSEMSFDKAARIQKNGILTLIDHSARLSYGHAFHKFPFQFRNSSNGRAFSFSTTFAFIVIPEAPNFCGSGFTFAIAPSPSFVGLPREYLGLPNFTQNGNFSKHLFAVEFDTFQDSRFQDIDGNHIGVDIGSFVSKAAIAAAYFSDDGGRKQELVLTSGKVIKAWIDYDSTQNSLSVSISPHNSKPRKPILSYKVDLSPILKDHMFAGFSASTGLYTSSQLILGWSFMMNGQARDFDLSSLPSPFKKRSGKSIIRASVLAAILAISVISVAVYIIKSITDFDRIESWEFQLGPHRYSYRELHRATRGFRDKELLGHGGFGKVYRGILPNSKTQIAVKRISNESKQGLREFVSEIATIGLLRHRNLVQLLGWCRRRSDLLLVYDFMANGSLDNYLFDNPKTILNWKQRIKIIKDIASALLYLHEGYKHVVIHRDVKASNVLLDGELNGKLGDFGLAKVYEHGSDPNTTRVVGTLGYVAPELARTGKSTTMSDVYAFGGLMLEVACGRRPVEVKALPEEMVLVDWVQEKYREGKLMEVVDPKLGGEFEETEMAVVLKMGVMCSAVEAERRPSIRQVVRCLDGEIGVA 984
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10972704 10977787 - MC01g0431 Mch1g0697 675589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0697 984 Gene3D Transferase(Phosphotransferase) domain 1 784 981 - -
Mch1g0697 984 CDD STKc_IRAK 713 979 - -
Mch1g0697 984 ProSitePatterns Protein kinases ATP-binding region signature. 713 736 IPR017441 GO:0005524(InterPro)
Mch1g0697 984 ProSiteProfiles Protein kinase domain profile. 13 287 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g0697 984 CDD lectin_legume_LecRK_Arcelin_ConA 396 630 IPR001220 GO:0030246(InterPro)
Mch1g0697 984 ProSiteProfiles Protein kinase domain profile. 707 981 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g0697 984 SUPERFAMILY Protein kinase-like (PK-like) 688 975 IPR011009 -
Mch1g0697 984 FunFam L-type lectin-domain containing receptor kinase V.9 389 631 - -
Mch1g0697 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g0697 984 FunFam L-type lectin-domain containing receptor kinase S.1 692 783 - -
Mch1g0697 984 Gene3D Transferase(Phosphotransferase) domain 1 90 293 - -
Mch1g0697 984 Pfam Legume lectin domain 394 640 IPR001220 GO:0030246(InterPro)
Mch1g0697 984 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Mch1g0697 984 Gene3D - 392 637 - -
Mch1g0697 984 SUPERFAMILY Protein kinase-like (PK-like) 2 283 IPR011009 -
Mch1g0697 984 PANTHER - 394 980 IPR050528 GO:0005886(PANTHER)
Mch1g0697 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g0697 984 Pfam Protein tyrosine and serine/threonine kinase 710 977 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g0697 984 Pfam Protein tyrosine and serine/threonine kinase 16 283 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g0697 984 SUPERFAMILY Concanavalin A-like lectins/glucanases 396 643 IPR013320 -
Mch1g0697 984 FunFam L-type lectin-domain containing receptor kinase S.4 784 984 - -
Mch1g0697 984 CDD STKc_IRAK 19 285 - -
Mch1g0697 984 FunFam L-type lectin-domain containing receptor kinase S.4 90 295 - -
Mch1g0697 984 FunFam serine/threonine-protein kinase PBS1-like 1 89 - -
Mch1g0697 984 Gene3D Phosphorylase Kinase; domain 1 692 783 - -
Mch1g0697 984 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Mch1g0697 984 SMART serkin_6 13 283 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g0697 984 SMART serkin_6 707 970 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0697 Mch-Chr1:10972704 Mch5g1968 Mch-Chr5:19508354 3.78E-278 dispersed
Mch1g0694 Mch-Chr1:10918023 Mch1g0697 Mch-Chr1:10972704 3.01E-236 proximal
Mch1g0697 Mch-Chr1:10972704 Mch1g0700 Mch-Chr1:10988049 4.26E-180 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77109 PF07714 PK_Tyr_Ser-Thr 4.90E-45 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0697 - - - 0.0