Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0718 ATGGGTAATCGTATTGGGAAAATTGGCCGGTGCTTCGCCGGCGACGGAGACATCTCCCGGCGTTATGATCCCGCCGACATTATCTCCGACCCCCACGACGGAGGTTTCGGCCACTCCTTTTACTATCTCCCGCCCGACCCACAAACCCTCTCCTCCTCCAAAGATTTCTCAGACGATTACATCTCTCCGGCCACTGTTTTCCGGTCCATTTCCGGCGCCTCCGTCAGCGCCAACGTCTCCACGCCGCTCTCCACTTCTCTAGTCGACCTTTACCCTTACAGCACCACGTTCGATCGCGCCGCCGCCTTCGATTGCTCCGATTCCTTCGCCTCCGTCCCTCTCCAACCGGTCCCCCGCCACTCGGTGTCCGGAAACTCCGGCGGATTTCCCTGTTCGGGTCCGGTCGAGAGAGGGTTTTTATCCGGACCCTTGGCCCGGAGCTTGGAATCGGGTCCGATTGATCGAGGGGTTTATTCCGGCCCGATGGAAAAGGGCCCCGAGAAATTGCAGAGGAGCTTCTCCCACGGCGGCGTTGGAGATGATAAACCCAAATCGAAAACACGAAATCTGATTCAGATTCTAAAGAGAGCCATTTCCAAAACCATAACTAGAAACCAGAAGACTCTGAGTTCAAGAGTAAGAGAATCGGAATCGTACAAACACAACGAAAATGCCGCGGCGGCGGCGCAAAGCAGCGCTAATTTGAGCAGCCACGCGAGCTTGGCTCACGAAGACGACGGCGATTACTTTCTCGGCGGCCAGAGCGTACAGTGGGCACAGGGGAAGGCCGGCGAGGACAGAGTTCACGTCGTGATATCGGAGGACAACGGTTGGGTTTTCGTCGGAATTTACGACGGATTCAACGGCCCTGATGCCCCTGATTACTTACTCGCCAATCTCTACACCGCTGTCCTCAAAGAACTCAAGGGTTTGATTTGGAATGATAAATTCGATTCAACTGCAACTTCATCTTCTATGAACTCATCCAACTCTGCTTCAGTTGAGGAAGACGATGGAACCCATGTGAAAAATCAGTCGGCGGGAAATGGGGTTGTGAATTTGGAAGCTGATTCGGGGAGGAACAAAGAGAGAGTTTACAGTACCAACTATAGGACGAGTCAGCTAATGAAGAAGGCCGATCAGAATCCTAAGGATTGGAAATGTGAATGGGAAAGGGAAAGGTTGGAATTCGATGGGAAGTTTGACAATAGACAATTAGATCACCACCCGTTATGGGATGAATCAGCAGCAATCAATCATTCTGAGGTGTTGAATGCTCTGTCTCAAGCATTGAGAAAGACAGAGGAAGCATATCTACAGAATGCAGACAAGATGGTTACTAGAAATCCAGAGTTAGCTCTCATGGGTTCTTGTGTTTTGGTTATGTTGATGAGAGGAGAAGATGTGTACTTGATGAATGTAGGAGACAGCCGCGCCATTGCAGCGCAGCAACTCGAACCGGATTTTGGGATTGGAAAACCCTATAGAGACTTTGAGAGAATCAATGAAGGAACTCTGCGAGTATTTGAATCCTCTAATGGAGTTGAGTTTGAAAGATTACCAACCTTGGCTTCCCAGCTCACAATGGATCATAGCACGTATACAGAGGAGGAAGTTCAGAGGATCAAGAATGCTCATCCCGACGACGCTTCTGCAATTATGAACGACAGGGTGAAAGGTTACTTGAAAATCACTCGTGCTTTCGGAGCTGGCTTTCTCAAACAGCCAAAGTGGAATGATGCCCTGCTAGAGATGTTCAGAATAGACTATGTGGGAAACTCACCCTACATCACCTGTGATCCATCACTCTGCCATTATAAACTCAGCCCAACAGACAGATTCTTGATATTGTCCTCTGATGGACTCTACCAGTACTTCACCAATGAAGAAGCTGTTTCTCAAGTTGAGTCCTTCATTGCTTCTTTCCCTGAAGGAGATCCTGCTCAACATCTCATTGAAGAAGTATTGTTCCGAGCAGCTAAAAAAGCTGGATTGGACTTCCATGAGCTGCTCGATATCCCACAAGGGGAGCGGCGGAAGTACCACGACGACGTTTCGGTAATCATCGTTTCATTCGAAGGAAGAATTTGGCATTCATTGATGTAA 2106 49.24 MGNRIGKIGRCFAGDGDISRRYDPADIISDPHDGGFGHSFYYLPPDPQTLSSSKDFSDDYISPATVFRSISGASVSANVSTPLSTSLVDLYPYSTTFDRAAAFDCSDSFASVPLQPVPRHSVSGNSGGFPCSGPVERGFLSGPLARSLESGPIDRGVYSGPMEKGPEKLQRSFSHGGVGDDKPKSKTRNLIQILKRAISKTITRNQKTLSSRVRESESYKHNENAAAAAQSSANLSSHASLAHEDDGDYFLGGQSVQWAQGKAGEDRVHVVISEDNGWVFVGIYDGFNGPDAPDYLLANLYTAVLKELKGLIWNDKFDSTATSSSMNSSNSASVEEDDGTHVKNQSAGNGVVNLEADSGRNKERVYSTNYRTSQLMKKADQNPKDWKCEWERERLEFDGKFDNRQLDHHPLWDESAAINHSEVLNALSQALRKTEEAYLQNADKMVTRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIAAQQLEPDFGIGKPYRDFERINEGTLRVFESSNGVEFERLPTLASQLTMDHSTYTEEEVQRIKNAHPDDASAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGNSPYITCDPSLCHYKLSPTDRFLILSSDGLYQYFTNEEAVSQVESFIASFPEGDPAQHLIEEVLFRAAKKAGLDFHELLDIPQGERRKYHDDVSVIIVSFEGRIWHSLM 701
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11098233 11101581 + MC01g0450 Mch1g0718 675610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0718 701 MobiDBLite consensus disorder prediction 205 231 - -
Mch1g0718 701 MobiDBLite consensus disorder prediction 320 346 - -
Mch1g0718 701 ProSiteProfiles PPM-type phosphatase domain profile. 250 692 IPR001932 -
Mch1g0718 701 MobiDBLite consensus disorder prediction 168 186 - -
Mch1g0718 701 Gene3D - 228 697 IPR036457 -
Mch1g0718 701 CDD PP2Cc 397 692 IPR001932 -
Mch1g0718 701 FunFam Protein phosphatase 2C 29 237 699 - -
Mch1g0718 701 Pfam Protein phosphatase 2C 403 483 IPR001932 -
Mch1g0718 701 Pfam Protein phosphatase 2C 525 642 IPR001932 -
Mch1g0718 701 SMART PP2C_4 239 690 IPR001932 -
Mch1g0718 701 PANTHER PROTEIN PHOSPHATASE 2C 231 692 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Mch1g0718 701 MobiDBLite consensus disorder prediction 158 186 - -
Mch1g0718 701 SUPERFAMILY PP2C-like 259 693 IPR036457 -
Mch1g0718 701 MobiDBLite consensus disorder prediction 320 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1634 Mch-Chr10:16478906 Mch1g0718 Mch-Chr1:11098233 5.83E-142 dispersed
Mch5g0702 Mch-Chr5:4757016 Mch1g0718 Mch-Chr1:11098233 2.67E-73 transposed
Mch1g0718 Mch-Chr1:11098233 Mch2g0902 Mch-Chr2:6129808 2.40E-242 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0718 - - - 0.0