Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0739 ATGACGGGCATGGGCGTGAACATAACCTCCATTAAAACCGCCTCCGATGGCGTCTGGCAAGGCGATAACCCTCTCCATTTCGCCTTCCCTCTCTTAATTCTTCAGTCCACTTTGATCCTCCTCGTCACCCGATTCCTCACTCTCCTCCTCAAACCCCTTCGCCAGCCCAAAGTCACCGCTGAAATTCTCGGCGGGATTCTGCTGGGGCCGTCCGCTTCTGGAAGGAGCAAGGCGTATTTGGATCTCGTTTTTCCTCCGTGGAGCACTCCGATTCTCGAATCCGTCGCCAGCATCGGTTTGCTCTTCTTTCTGTTTCTCGTCGGCCTCGAACTCGATTTCTCCTCCATTCGCCGCGGCGGAAGGAGGGCTTTCGGCATAGCCTTCGCCGGCATTTCCGTCACCTTCCTCGCTGGCGTCGGCATCACCTCCGTCTTCCGCAGCACCGTCGACGGCGCCGATCAGGTCGGCTACGGCCAGTTGCTCGTCTTCATGGGCGTCGCTCTCTCCATCACCGCCTTCCCCGTCCTCGCCCGCATTCTCGCCGAGCTCAAACTCCTCACCACTCACGTCGGAGAGACCGCCGTCGCCGCCGCCGCTTTCAACGACGTCGCCGCCTGGATTCTACTCGCCCTCGCCGTCGCGCTCACTGGCGGAGGCGGAGGAGGCAGTGGGGCCCAAGGGAGCCTGTTGGTTTCCGCGTGGGTCCTACTTTCGGGAGCCGGGTTTGTGGTTTTCATGATGGTAGCGATCCGACCCGCGATGGACCGGGTCGCCCGACGCTGCTCGCACGGGCACAACTCCGCCGACGATGCCTATATTTGTTTGACCCTAATCGGAGTTATGGTTTCGGGTTTCGTGACGGATCTGATCGGAATCCATTCGATTTTCGGAGGGTTCATATTCGGGTTGACGATTCCGAAAGGTGGGAGGTTCGCGGAGAGATTGATTGGGAGGATTGAGGATTTCGTTTCGGATCTGCTTCTTCCGCTGTACTTCGCATCGAGCGGGTTGAAGACGGACATAGCGAAGATCCGCGGCGGGAGGGCGTGGGGGCTGGTGGCGCTGGTGACGTTGACGGCCTGCGCCGGAAAGATTCTGGCGACATTTGCGGTGGCGATGGCGTTTCTGATGCCGGCGAGAGAATCGCTGACATTGGGCCTCCTTATGAACACAAAGGGCTTGGTGGAACTCATCGTCCTCAATATCGGCAAGGAGAAGAAGGTTCTGAATGATGAAGTATTCGCCATTTTAGTGCTAATGGCGCTCTTCAATACTTTCATCACCACCCCTTCTGTCATGGCGGTTTACAAGCCGGCCCACGGCGTCTCCACCCGAACCCACCGGAAGCTCTGCGACCTCTCCTCCTCCGCCGCCGCCGACGGCTGCAAGGTGGACGAACTCCGAATCTTGGGTTGCGTCCATGGACCCGGGAATGTACCCTCATTAATCAACTTAATCGATTCAACTCGCAGCACCAAAAACTGTTCGCTCAAGCTTTTCGCCGTGCACCTCGTGGAGCTCACCGAGCGGCCCTCCTCCATTATTATGGTCCACCGAGCTCGCAAGAATGGGTTCCCTTGGTTCCGCTTTCGCAAAGGCGAATGGCACGCCCAAATGGTCGCTGCGTTTCAGTCCTATAGCCAATTGGGTCGGGTCAGGGTCCGACCCACTACCACCATCTCTTCCCTATCCACCATGCACGAAGATGTCTACCACGTGGCGGAAGATAAGAGAGTGGCCTTGATCCTCTTGCCGTTCCACAAGAATTGGAGGGCTGCCGGCGGGGACGCGGCGGCGCCGGAGGATATGGGCCATGGCTGGCGAGTGATGAACCAGAGGGTGTTGGAGAACGCGCCCTGTTCAGTCGCGGTTCTTGTGGACCGTGGATTTGGGGCCCATGCTACTGGGCCCATTTTCAATCTGGCCCAACAGATTTGTGTCATCTTTTGTGGTGGGCCCGACGATCGTGAGGCCCTAGAGCTTGGCCGGCGAATGGCGGCGCATCCGGCGGTCAAGGTGACGGTGGTCAGGTTTCGGCCGGTGGAAGGGGTGGAGGGTCATAATGTCATTTTGCAACCAATGCCTTCAGAATCCGGACTCGGAGACAGCAGCTATAACTCCGAGCTAGATGACATAGCAATGGCAGAATTCAAAACCAAATGGGGTGGAGCTGTTGAGTACATAGAGAAGGAGGCCCACGACATCGTTGAAGGGGTGGTAACCATCGGACAAGAAGGCAGTTACGATCTAATCGTGGTGGGAAGGGGTCAGTTTCCATCGACCGTGGTGCCTAAACTAGCGGACCGCCCAGCAGAGCACACCGAGTTGGGGCCGATAGGCAGTATATTGGCCGAGTCGAACTGGGGAATAGTATCTTCAGTACTGGTAGTTCAACAGTATAAAGGATAA 2409 57.41 MTGMGVNITSIKTASDGVWQGDNPLHFAFPLLILQSTLILLVTRFLTLLLKPLRQPKVTAEILGGILLGPSASGRSKAYLDLVFPPWSTPILESVASIGLLFFLFLVGLELDFSSIRRGGRRAFGIAFAGISVTFLAGVGITSVFRSTVDGADQVGYGQLLVFMGVALSITAFPVLARILAELKLLTTHVGETAVAAAAFNDVAAWILLALAVALTGGGGGGSGAQGSLLVSAWVLLSGAGFVVFMMVAIRPAMDRVARRCSHGHNSADDAYICLTLIGVMVSGFVTDLIGIHSIFGGFIFGLTIPKGGRFAERLIGRIEDFVSDLLLPLYFASSGLKTDIAKIRGGRAWGLVALVTLTACAGKILATFAVAMAFLMPARESLTLGLLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFNTFITTPSVMAVYKPAHGVSTRTHRKLCDLSSSAAADGCKVDELRILGCVHGPGNVPSLINLIDSTRSTKNCSLKLFAVHLVELTERPSSIIMVHRARKNGFPWFRFRKGEWHAQMVAAFQSYSQLGRVRVRPTTTISSLSTMHEDVYHVAEDKRVALILLPFHKNWRAAGGDAAAPEDMGHGWRVMNQRVLENAPCSVAVLVDRGFGAHATGPIFNLAQQICVIFCGGPDDREALELGRRMAAHPAVKVTVVRFRPVEGVEGHNVILQPMPSESGLGDSSYNSELDDIAMAEFKTKWGGAVEYIEKEAHDIVEGVVTIGQEGSYDLIVVGRGQFPSTVVPKLADRPAEHTELGPIGSILAESNWGIVSSVLVVQQYKG 802
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11238311 11247124 + MC01g0471 Mch1g0739 675631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0739 802 Gene3D - 31 441 IPR038770 -
Mch1g0739 802 FunFam Cation/H(+) antiporter 15 31 443 - -
Mch1g0739 802 PANTHER CATION/H + ANTIPORTER 12 801 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Mch1g0739 802 Pfam Sodium/hydrogen exchanger family 42 432 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0739 Mch-Chr1:11238311 Mch2g1588 Mch-Chr2:12778493 1.19E-198 dispersed
Mch1g0737 Mch-Chr1:11227541 Mch1g0739 Mch-Chr1:11238311 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0739 K26731 - csv:101207589 1093.95