Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0746 ATGAACGTCCAAATTAGCCAATGGTGTGTCTCAGCCAAGCCATTTTTTGCTGTGGTGTTCTTGCAGTTTGGGCTTGCAGGAATGGACATTCTGTCTAAAGCAGCTCTGAACCAAGGAATGAGCAATTATGTTCTTGTTGTTTACCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCTCTGATTTTTGACAAGAAAGTCAGACCAAAGATGACAATCCCAATCTTTGCCAAGTTAATGGTGCTCAGCTTGCTAGAGCCTGTAATTGATCAGAACTTGTATTTCTTGGGAATGAAGTACACAACAGCAACATTTGCAGCTGCCATGTGCAATATTCTACCTGCAATTACCTTTGTAATGGCTTGGATCCTCAGGCTTGAGAAGGTAAAAATCAAAAGCATCAGAAGCCAAGCCAAGTTGGTGGGAACCATAGCAACAGTAGGAGGAGCCATGATAATGACCCTAATAAAAGGCCCAATTTTGGAACTATTTTGGGTAAAAGAGAGAGCCAACCATCAACAACAAAGGGGTGAAATCAGCCTTCAACATACAATCAAAGGCTCCATTATGATCACAATTGGCTGCTTCAGCTGGGCCTGCTTCATGATTCTTCAGGCAATTACTTTGAAAGCTTACCCGGCTGAGCTTTCTCTTACGGCTTGGATTTGCCTGCTGGGAACCGCGGAGGGAACCGTGTTGGCTTTGGTGATGGAAAGGGGAAATGCCGCGGTTTGGTCCATTACTTGGGGAACTAAATTGCTCGCCGCTGTTTATAGTGGGATATTCTGTTCAGGACTTGCTTATTACATCCAAGGACTTGTTATGAAAGACAAAGGACCTGTGTTTGTGACTGCCTTTAGCCCATTGAGTATGGTTATCGTGGCTATTATGAGTTCGTTCATTCTCGGCGAGCGTCTTTATTTTGGAAGAATACTTGGAGCTGGTGTGATAATTGTGGGGCTGTACCTTGTAGTTTGGGGGAAAAACAAAGATGGGAATTCCTCAAGTGAAGAACTGAAATTGCCCACCAAACAAACAAGAGAAATTGAAGCCAATAAGATGGAAAGTTTAACAATTGAGGCATCTAATTCCTCTGCTCTACAAAATGAGCAAAAATAA 1122 42.96 MNVQISQWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPIFAKLMVLSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVKIKSIRSQAKLVGTIATVGGAMIMTLIKGPILELFWVKERANHQQQRGEISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSITWGTKLLAAVYSGIFCSGLAYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRILGAGVIIVGLYLVVWGKNKDGNSSSEELKLPTKQTREIEANKMESLTIEASNSSALQNEQK 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11284866 11291394 + MC01g0478 Mch1g0746 675638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0746 373 PANTHER WAT1-RELATED PROTEIN 17 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch1g0746 373 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020(InterPro)
Mch1g0746 373 Pfam EamA-like transporter family 23 135 IPR000620 GO:0016020(InterPro)
Mch1g0746 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Mch1g0746 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 331 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0473 Mch-Chr1:9178636 Mch1g0746 Mch-Chr1:11284866 3.73E-115 dispersed
Mch1g0746 Mch-Chr1:11284866 Mch4g1761 Mch-Chr4:20627065 8.07E-126 dispersed
Mch1g0746 Mch-Chr1:11284866 Mch4g2113 Mch-Chr4:23195641 2.73E-135 wgd
Mch1g0746 Mch-Chr1:11284866 Mch9g1572 Mch-Chr9:17986224 3.92E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0746 - - - 0.0