Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0773 ATGAATGCTAATGCCGACAGGCACCATGAGTTAAAAGAACCAAATCACCACGTACAGGATAGAAATGGAAGTGTAAACGATGGTGTAACTGGCAGGGAACAGAGCCCGCTTGAGGAAAATGAGTTGAAAGACAATGGATTAACTAGAAATGCAGAAGGTGGACGAAAATCTGCAATTCAAGCCCATGACATTCTGCAAATACAACAGCAGCAGCAGCCTCAAGGATCGATGGTCTGCTGGGAGAGATTTCTACATCTTAGATCTCTTAAGGTTTTGCTTGTAGAAAATGATGACTCCACTCGGCATCTAGTCACTGCACTGCTTCGTAACTGCAGTTATGAAGTTATTGCGGCTGCCAATGGACTACACGCATGGAAGTTGCTAGAAGATCTGAAAAATCACATAGATCTCGTATTAACAGAAGTGGTCATGCCTTGCTTATCTGGCATCGGTCTTTTATGCAAGATTATGAGCCATAAAACACGAAAGAATATACCCGTAATCATGATGTCTTCTCATGACTCGATGGGTTTAGTCTTTAAATGTTTGTCAAAGGGTGCTGTTGATTTTTTAGTGAAGCCCATTCGGAAGAATGAGCTTAAGAACCTTTGGCAACATGTTTGGAGAAGATGTCATAGTTCTAGCGGTAGTGGAAGTGAAAGTGGCACACAGACTCAAAAATCTGTGAAGTCGAAAAGTGTTGAAAAAACAAACAACAACTCTGGAAGCAATGATGAAGAAGAAGACAATGAGAGCATTGGTTTCAATATTGGGGATGGAAGTGACGATGGCAGTGGTACACAGAGTTCTTGGACCAAGCAAGCTATAGAAGTTGAAAGCCCTCGACCAGTATCTGCTTCAGCATGGGATCAAAAACGTGAATGTCCTGATAGTACCTGTGCTCAAGTTGTCCACTCAAATGCCGATGCATTTACTAATAATGTGCTTCCTGTTTTGACAGCAGAGTGCCACCTGCAGAAAAAGCAATTTGAAACTGTTACCATGGGTAAGGTGGAATTAGGCATGCACAGAAATCTGGATTTACAACTTGAACTCTCGACAGAACGTCCAACCAAACATGTTGGAAGAAAACAGAATATTATGCTTGAGATAGGGTCCAGTGGATTTAATGACCAGTTAAATAAGGGACATCTTGATCTCAACTCTGAAAGCCCATCCAGCAAGCTTAATTATGAACAAACAGCTGTTACTGGTCTTGCTACCGATCTCACTGATTCTAAGATGGAAGTCACGGTGTTTGAGGCAGCAAGCAACCATCCCAATATCACAGACATTAAGGATAAAGATGTTACAGATTCAGAAGAGTTTCCATCCCTTGAGCTCGGATTGAAAAGGCTTAGAGGAGTTCAAACGGCAGGAAAAGCAGTCCAAGATGAGCGGAATGTTTTGAGACGCTCAGACTCTTCAGCTTTTTCTAGGTACAATGCTGCCTCAAATTCTAACAAGGCTCCAACTGGGAATGCTGGAAGTAATTCTCCGCCTGTTAATGGCTTAGAAGTTACAAACCAAGAGAATATGCAAGATATCCGATCTCATTCAAGTAGTAATCCTCCCAATCAGTGCTCAAATGGAGATAGCAATAATATTGACATGGGTTCCACTACTAATAATGCATTTTCAAAATCCTTTGTTACTAATAACAAGTCAGCAATGACATCAACAGTCAACTGTCTGCACCCGTCAGCAGCTTTCCAATCTGTTAAAAATGACACACTATCTGTTCCTCAGCAAGCTGATAATGTCAATAATGTGGCAAATACAACTATGCAAGCCCAGTCAAATTGTGTGCACAGCGAATCTCAAATTCTGCAACTTTGTCACCCGTATGATCCCAATCATCAGCTTGTCCACAATATTCAACAAGTGTCATTTGAGCATAATGATTTTTCATTAAAGAAAATATCAGCAGCTGCCACGCATTGTGGGTCAACCAATGTGTTAAATGGGCCTGTGGAAGGTAATGCAGCAAATTATAGTGTGAATGGGAGCGCCTCGGGCAGTAACCATGGAAGCAATGGCCAAAATGGGAGCAGCACGGCAGTAAATGCTGGAGGGCTAAATATGGAAAGTGATAATGGAATAGGTGGGAAAAGCCGAAGTGGGGATGCCAGTGGAAGCGGCAGTGGAAACAAAATGGACGAAAACAGAGTTTCACAAAGGGAAGCTGCCTTGACAAAGTTTCGCCAGAAAAGGAAGGAACGATGCTTCCGTAAAAAGGTCCGTTACCAAAGCCGAAAAAGATTAGCAGAACAGAGACCCCGTGTCAGGGGACAATTTGTGAGACAAAACACAAGCGAAAACACAAGCAATGGGGGAGATGGCTAA 2346 42.41 MNANADRHHELKEPNHHVQDRNGSVNDGVTGREQSPLEENELKDNGLTRNAEGGRKSAIQAHDILQIQQQQQPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKLLEDLKNHIDLVLTEVVMPCLSGIGLLCKIMSHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVEKTNNNSGSNDEEEDNESIGFNIGDGSDDGSGTQSSWTKQAIEVESPRPVSASAWDQKRECPDSTCAQVVHSNADAFTNNVLPVLTAECHLQKKQFETVTMGKVELGMHRNLDLQLELSTERPTKHVGRKQNIMLEIGSSGFNDQLNKGHLDLNSESPSSKLNYEQTAVTGLATDLTDSKMEVTVFEAASNHPNITDIKDKDVTDSEEFPSLELGLKRLRGVQTAGKAVQDERNVLRRSDSSAFSRYNAASNSNKAPTGNAGSNSPPVNGLEVTNQENMQDIRSHSSSNPPNQCSNGDSNNIDMGSTTNNAFSKSFVTNNKSAMTSTVNCLHPSAAFQSVKNDTLSVPQQADNVNNVANTTMQAQSNCVHSESQILQLCHPYDPNHQLVHNIQQVSFEHNDFSLKKISAAATHCGSTNVLNGPVEGNAANYSVNGSASGSNHGSNGQNGSSTAVNAGGLNMESDNGIGGKSRSGDASGSGSGNKMDENRVSQREAALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQNTSENTSNGGDG 781
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11448255 11457491 - MC01g_new0273 Mch1g0773 675665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0773 781 ProSiteProfiles CCT domain profile. 727 769 IPR010402 GO:0005515(InterPro)
Mch1g0773 781 MobiDBLite consensus disorder prediction 667 693 - -
Mch1g0773 781 MobiDBLite consensus disorder prediction 737 752 - -
Mch1g0773 781 MobiDBLite consensus disorder prediction 721 736 - -
Mch1g0773 781 MobiDBLite consensus disorder prediction 700 720 - -
Mch1g0773 781 MobiDBLite consensus disorder prediction 34 50 - -
Mch1g0773 781 MobiDBLite consensus disorder prediction 213 290 - -
Mch1g0773 781 MobiDBLite consensus disorder prediction 1 20 - -
Mch1g0773 781 FunFam Two-component response regulator-like PRR37 89 247 - -
Mch1g0773 781 ProSiteProfiles Response regulatory domain profile. 90 208 IPR001789 GO:0000160(InterPro)
Mch1g0773 781 Gene3D - 88 254 - -
Mch1g0773 781 MobiDBLite consensus disorder prediction 213 240 - -
Mch1g0773 781 MobiDBLite consensus disorder prediction 764 781 - -
Mch1g0773 781 MobiDBLite consensus disorder prediction 457 540 - -
Mch1g0773 781 SUPERFAMILY CheY-like 87 213 IPR011006 -
Mch1g0773 781 CDD psREC_PRR 91 194 - -
Mch1g0773 781 SMART REC_2 89 204 IPR001789 GO:0000160(InterPro)
Mch1g0773 781 MobiDBLite consensus disorder prediction 1 51 - -
Mch1g0773 781 Pfam CCT motif 727 769 IPR010402 GO:0005515(InterPro)
Mch1g0773 781 Pfam Response regulator receiver domain 91 202 IPR001789 GO:0000160(InterPro)
Mch1g0773 781 MobiDBLite consensus disorder prediction 261 276 - -
Mch1g0773 781 MobiDBLite consensus disorder prediction 667 781 - -
Mch1g0773 781 MobiDBLite consensus disorder prediction 474 540 - -
Mch1g0773 781 PANTHER TWO-COMPONENT RESPONSE REGULATOR 75 277 IPR045279 GO:0009736(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0773 Mch-Chr1:11448255 Mch3g1725 Mch-Chr3:18746928 4.24E-24 dispersed
Mch9g1959 Mch-Chr9:20987220 Mch1g0773 Mch-Chr1:11448255 1.13E-06 dispersed
Mch6g1811 Mch-Chr6:20717752 Mch1g0773 Mch-Chr1:11448255 4.49E-53 transposed
Mch4g0873 Mch-Chr4:6334485 Mch1g0773 Mch-Chr1:11448255 4.94E-07 transposed
Mch1g0773 Mch-Chr1:11448255 Mch2g0953 Mch-Chr2:6424818 2.92E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42689 PF00072 Response_reg 1.90E-20 CL0304 Mch TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0773 K12129 - csv:101210765 1269.99