Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch1g0773 | ATGAATGCTAATGCCGACAGGCACCATGAGTTAAAAGAACCAAATCACCACGTACAGGATAGAAATGGAAGTGTAAACGATGGTGTAACTGGCAGGGAACAGAGCCCGCTTGAGGAAAATGAGTTGAAAGACAATGGATTAACTAGAAATGCAGAAGGTGGACGAAAATCTGCAATTCAAGCCCATGACATTCTGCAAATACAACAGCAGCAGCAGCCTCAAGGATCGATGGTCTGCTGGGAGAGATTTCTACATCTTAGATCTCTTAAGGTTTTGCTTGTAGAAAATGATGACTCCACTCGGCATCTAGTCACTGCACTGCTTCGTAACTGCAGTTATGAAGTTATTGCGGCTGCCAATGGACTACACGCATGGAAGTTGCTAGAAGATCTGAAAAATCACATAGATCTCGTATTAACAGAAGTGGTCATGCCTTGCTTATCTGGCATCGGTCTTTTATGCAAGATTATGAGCCATAAAACACGAAAGAATATACCCGTAATCATGATGTCTTCTCATGACTCGATGGGTTTAGTCTTTAAATGTTTGTCAAAGGGTGCTGTTGATTTTTTAGTGAAGCCCATTCGGAAGAATGAGCTTAAGAACCTTTGGCAACATGTTTGGAGAAGATGTCATAGTTCTAGCGGTAGTGGAAGTGAAAGTGGCACACAGACTCAAAAATCTGTGAAGTCGAAAAGTGTTGAAAAAACAAACAACAACTCTGGAAGCAATGATGAAGAAGAAGACAATGAGAGCATTGGTTTCAATATTGGGGATGGAAGTGACGATGGCAGTGGTACACAGAGTTCTTGGACCAAGCAAGCTATAGAAGTTGAAAGCCCTCGACCAGTATCTGCTTCAGCATGGGATCAAAAACGTGAATGTCCTGATAGTACCTGTGCTCAAGTTGTCCACTCAAATGCCGATGCATTTACTAATAATGTGCTTCCTGTTTTGACAGCAGAGTGCCACCTGCAGAAAAAGCAATTTGAAACTGTTACCATGGGTAAGGTGGAATTAGGCATGCACAGAAATCTGGATTTACAACTTGAACTCTCGACAGAACGTCCAACCAAACATGTTGGAAGAAAACAGAATATTATGCTTGAGATAGGGTCCAGTGGATTTAATGACCAGTTAAATAAGGGACATCTTGATCTCAACTCTGAAAGCCCATCCAGCAAGCTTAATTATGAACAAACAGCTGTTACTGGTCTTGCTACCGATCTCACTGATTCTAAGATGGAAGTCACGGTGTTTGAGGCAGCAAGCAACCATCCCAATATCACAGACATTAAGGATAAAGATGTTACAGATTCAGAAGAGTTTCCATCCCTTGAGCTCGGATTGAAAAGGCTTAGAGGAGTTCAAACGGCAGGAAAAGCAGTCCAAGATGAGCGGAATGTTTTGAGACGCTCAGACTCTTCAGCTTTTTCTAGGTACAATGCTGCCTCAAATTCTAACAAGGCTCCAACTGGGAATGCTGGAAGTAATTCTCCGCCTGTTAATGGCTTAGAAGTTACAAACCAAGAGAATATGCAAGATATCCGATCTCATTCAAGTAGTAATCCTCCCAATCAGTGCTCAAATGGAGATAGCAATAATATTGACATGGGTTCCACTACTAATAATGCATTTTCAAAATCCTTTGTTACTAATAACAAGTCAGCAATGACATCAACAGTCAACTGTCTGCACCCGTCAGCAGCTTTCCAATCTGTTAAAAATGACACACTATCTGTTCCTCAGCAAGCTGATAATGTCAATAATGTGGCAAATACAACTATGCAAGCCCAGTCAAATTGTGTGCACAGCGAATCTCAAATTCTGCAACTTTGTCACCCGTATGATCCCAATCATCAGCTTGTCCACAATATTCAACAAGTGTCATTTGAGCATAATGATTTTTCATTAAAGAAAATATCAGCAGCTGCCACGCATTGTGGGTCAACCAATGTGTTAAATGGGCCTGTGGAAGGTAATGCAGCAAATTATAGTGTGAATGGGAGCGCCTCGGGCAGTAACCATGGAAGCAATGGCCAAAATGGGAGCAGCACGGCAGTAAATGCTGGAGGGCTAAATATGGAAAGTGATAATGGAATAGGTGGGAAAAGCCGAAGTGGGGATGCCAGTGGAAGCGGCAGTGGAAACAAAATGGACGAAAACAGAGTTTCACAAAGGGAAGCTGCCTTGACAAAGTTTCGCCAGAAAAGGAAGGAACGATGCTTCCGTAAAAAGGTCCGTTACCAAAGCCGAAAAAGATTAGCAGAACAGAGACCCCGTGTCAGGGGACAATTTGTGAGACAAAACACAAGCGAAAACACAAGCAATGGGGGAGATGGCTAA | 2346 | 42.41 | MNANADRHHELKEPNHHVQDRNGSVNDGVTGREQSPLEENELKDNGLTRNAEGGRKSAIQAHDILQIQQQQQPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKLLEDLKNHIDLVLTEVVMPCLSGIGLLCKIMSHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVEKTNNNSGSNDEEEDNESIGFNIGDGSDDGSGTQSSWTKQAIEVESPRPVSASAWDQKRECPDSTCAQVVHSNADAFTNNVLPVLTAECHLQKKQFETVTMGKVELGMHRNLDLQLELSTERPTKHVGRKQNIMLEIGSSGFNDQLNKGHLDLNSESPSSKLNYEQTAVTGLATDLTDSKMEVTVFEAASNHPNITDIKDKDVTDSEEFPSLELGLKRLRGVQTAGKAVQDERNVLRRSDSSAFSRYNAASNSNKAPTGNAGSNSPPVNGLEVTNQENMQDIRSHSSSNPPNQCSNGDSNNIDMGSTTNNAFSKSFVTNNKSAMTSTVNCLHPSAAFQSVKNDTLSVPQQADNVNNVANTTMQAQSNCVHSESQILQLCHPYDPNHQLVHNIQQVSFEHNDFSLKKISAAATHCGSTNVLNGPVEGNAANYSVNGSASGSNHGSNGQNGSSTAVNAGGLNMESDNGIGGKSRSGDASGSGSGNKMDENRVSQREAALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQNTSENTSNGGDG | 781 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11448255 | 11457491 | - | MC01g_new0273 | Mch1g0773 | 675665 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch1g0773 | 781 | ProSiteProfiles | CCT domain profile. | 727 | 769 | IPR010402 | GO:0005515(InterPro) | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 667 | 693 | - | - | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 737 | 752 | - | - | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 721 | 736 | - | - | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 700 | 720 | - | - | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 34 | 50 | - | - | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 213 | 290 | - | - | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Mch1g0773 | 781 | FunFam | Two-component response regulator-like PRR37 | 89 | 247 | - | - | |
Mch1g0773 | 781 | ProSiteProfiles | Response regulatory domain profile. | 90 | 208 | IPR001789 | GO:0000160(InterPro) | |
Mch1g0773 | 781 | Gene3D | - | 88 | 254 | - | - | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 213 | 240 | - | - | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 764 | 781 | - | - | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 457 | 540 | - | - | |
Mch1g0773 | 781 | SUPERFAMILY | CheY-like | 87 | 213 | IPR011006 | - | |
Mch1g0773 | 781 | CDD | psREC_PRR | 91 | 194 | - | - | |
Mch1g0773 | 781 | SMART | REC_2 | 89 | 204 | IPR001789 | GO:0000160(InterPro) | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
Mch1g0773 | 781 | Pfam | CCT motif | 727 | 769 | IPR010402 | GO:0005515(InterPro) | |
Mch1g0773 | 781 | Pfam | Response regulator receiver domain | 91 | 202 | IPR001789 | GO:0000160(InterPro) | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 261 | 276 | - | - | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 667 | 781 | - | - | |
Mch1g0773 | 781 | MobiDBLite | consensus disorder prediction | 474 | 540 | - | - | |
Mch1g0773 | 781 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 75 | 277 | IPR045279 | GO:0009736(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g0773 | Mch-Chr1:11448255 | Mch3g1725 | Mch-Chr3:18746928 | 4.24E-24 | dispersed | |
Mch9g1959 | Mch-Chr9:20987220 | Mch1g0773 | Mch-Chr1:11448255 | 1.13E-06 | dispersed | |
Mch6g1811 | Mch-Chr6:20717752 | Mch1g0773 | Mch-Chr1:11448255 | 4.49E-53 | transposed | |
Mch4g0873 | Mch-Chr4:6334485 | Mch1g0773 | Mch-Chr1:11448255 | 4.94E-07 | transposed | |
Mch1g0773 | Mch-Chr1:11448255 | Mch2g0953 | Mch-Chr2:6424818 | 2.92E-06 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
42689 | PF00072 | Response_reg | 1.90E-20 | CL0304 | Mch | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch1g0773 | K12129 | - | csv:101210765 | 1269.99 |