Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0791 ATGAGTGTTGGGAGCTCAAGATTTGTGTTAATTCTTCTATTATCATCCTTGCTCCTCCTCTTCAATTTTGGGAAGAGCCAACAACAGCTTATAGTAAATTACTACAACCAAAGTTGCCCAAATGCTGAAGACATAATCAAGCAACAAGTTTTCAGCTTATACCAGAAACATGGCAACACTGCCATCTCTTGGATCAGAAATCTCTTCCATGATTGCATGGTCAAGTCGTGCGATGCATCTCTTTTGTTAGAGATGAAGACAAAAGAGGGTAAAATTGTATCAGAGAAGGCATCTCCGAGGAGTTTTGGGATGAGGAATTTCAAATATGTAAACAAAATCAAACAAGTCCTTGAAAATGTATGCCCCAACACTGTTTCATGTGCAGATGTCATGGCTCTGGCTGCAAGAGATGCCATTTTCTTGTTAGGGGGAGGAGAGATTGAAATGAAAACAGGGAGAAGAGACAGCAAGGAAAGTTACGAGGCAGTGGTGGAACAGTTTATCCCAAATCACAATGACTCTCTTTCTTTGGTTCTCTCTCGCTTTCAAGACATTGGCATTGATCCTCAGGCTACCGTTGCTCTTTTAGGAGCTCACTCCGTGGGTCGGGTGCACTGCGTAAATATAGTGAACCGGTTGTACCCGACCGTGGACCCGACTCTAGATCCGGAGCATGCGGAGTATCTGAAAAGACGGTGCCCGACCCAAAACCCAGACCCGAAGGCAGTCCAGTACGCGAGGAACGATCTTGAAAGCCCAATGGTTCTGGACAACAACTACTACAAAAACGTATTGGGCCACAAGGCCCTTCTGCTGGTGGACCAGCAATTGGGCTCGAGCCCAATTACTCTCCCTTATGTCCAAAACATGGCGTCCAATAACAGCTACTTCCTCGACCAATTTGCAAGGGCCGTTCTGTTGTTGTCGGAGAATAGCCCTCTTGGTGATGACCAAGGAGAGATTAGAAAAGATTGTCGACATGTTAATTAA 990 45.15 MSVGSSRFVLILLLSSLLLLFNFGKSQQQLIVNYYNQSCPNAEDIIKQQVFSLYQKHGNTAISWIRNLFHDCMVKSCDASLLLEMKTKEGKIVSEKASPRSFGMRNFKYVNKIKQVLENVCPNTVSCADVMALAARDAIFLLGGGEIEMKTGRRDSKESYEAVVEQFIPNHNDSLSLVLSRFQDIGIDPQATVALLGAHSVGRVHCVNIVNRLYPTVDPTLDPEHAEYLKRRCPTQNPDPKAVQYARNDLESPMVLDNNYYKNVLGHKALLLVDQQLGSSPITLPYVQNMASNNSYFLDQFARAVLLLSENSPLGDDQGEIRKDCRHVN 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11556434 11558652 - MC01g0514 Mch1g0791 675683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0791 329 Gene3D - 33 329 - -
Mch1g0791 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 Pfam Peroxidase 47 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 Gene3D Peroxidase, domain 2 169 308 - -
Mch1g0791 329 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 SUPERFAMILY Heme-dependent peroxidases 29 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 FunFam Peroxidase 33 177 - -
Mch1g0791 329 ProSiteProfiles Plant heme peroxidase family profile. 29 329 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g0791 329 CDD secretory_peroxidase 29 328 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch1g0791 329 FunFam Peroxidase 169 308 - -
Mch1g0791 329 PANTHER - 13 329 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0791 Mch-Chr1:11556434 Mch3g1240 Mch-Chr3:15491562 1.50E-125 dispersed
Mch1g0791 Mch-Chr1:11556434 Mch5g1761 Mch-Chr5:18184085 4.22E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0791 K00430 - csv:101221151 542.732