Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0842 ATGGGAGGAAAGTGCCCTCACAGAAGCGTCAAGAAGCGGAGGTACTCCCATAAGACCGCTCGGCGCACGAAATTCCTCGTCAAAGATATCCTTTATGGGGATGATATGGTTTACGATGAGTTGAAGAAACCCGATGTGGAGAGGCCTTCTCTGCCTGTCGATGAAGATTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGACCGATACTTTGCGAATGTGTCTGTGAGGGACGAGCATTTCAAGACCAAGCGTCACAGGAAGCGTATGAAACTAATGACGGGTCCTGCACCCCACACACAGTTGGACGCCGAGTTAGCTGCTGGGATGGGCATGCCCGATAACGGTCCGAAGCTTATGTCAATGTGA 372 51.88 MGGKCPHRSVKKRRYSHKTARRTKFLVKDILYGDDMVYDELKKPDVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRMKLMTGPAPHTQLDAELAAGMGMPDNGPKLMSM 123
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11867231 11868473 + MC01g0551 Mch1g0842 675734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0842 123 FunFam Zinc finger protein 593 49 113 - -
Mch1g0842 123 SUPERFAMILY beta-beta-alpha zinc fingers 51 114 IPR036236 -
Mch1g0842 123 PANTHER EXPRESSED PROTEIN 1 123 - -
Mch1g0842 123 Gene3D Classic Zinc Finger 49 113 - -
Mch1g0842 123 Pfam Zinc-finger double-stranded RNA-binding 62 88 IPR022755 -
Mch1g0842 123 ProSitePatterns Zinc finger C2H2 type domain signature. 65 87 IPR013087 -
Mch1g0842 123 SMART ZnF_U1_5 60 94 IPR003604 GO:0003676(InterPro)|GO:0008270(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0842 K14821 - csv:101222807 236.113