Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0852 GGAGGCGCGAGGTTGAGGATCTGGAGTGGGAGTGGGCGGCGACAGATGAGGAATTTCGCCTTACAAGTTCTGCTGGGCCGATGGTTCACCGTCTTCGCTTCTTTACTGATCATGGCCGTTTCCGGCGCCACCTACATGTTCGGACTCTACTCCGCCGACATCAAATCTTCACTGGGTTACGATCAGACCACCCTCAATCTCCTCGGCTTCTTCAAGGATCTGGGTGCAAACGTTGGAGTCTTGTCCGGCCTCATCAATGAAATTACGCCGCCCTGGGTCGTTCTCTTCATCGGCGGAGTCATGAATTTCTTTGGCTATTTCATGATTTGGCTCTCTGTCACTCAACGAATCGCCAAACCCAAGGTGCCCGCCATGTGTTTGTATATATGCCTAGGTGCTAATTCTCAGACCTATGCTAATACGGGAGCTTTAATCCCTTCCGTGAAGAATTTCCCGGAGTATCGAGGTAATGTATTGGGTTTATTGAAAGGGTTTGTTGGTTTAAGTGGGGCTATTTTGACTCAGCTTTACCATGCTTTTTATGGGGATGACTCTAAGGATTTTATATTGCTCATTGCTTGGCTGCCCACTGCTGTTTCTTTCCTGCTTCTTCGGATTGTTAGAGTAGTGGAAGTAGATCAAAGATCCAAATCCAACGATCTCAAGATTTTCTATCATTTGCTATACATTTCCCTTGGTCTTGCCTGCTTCCTCATGATTTTGATTATTATTCAAAATGAGCTCGTGTTTACTAGAATTCAGTATTTGGGTTGTGCGCTTATTCTCCTAGTGCTTCTGTTTCTCCCCCTTGCTGTTGTCATAACAGAAGAATTCAGCATTAAGAAGAGAAAATTGCAAGCTTTGAATGTAACTTCTTGGCTTTCGGACCCATCTCCAGCTGAATTACCATCGTCTAGACCACCACATCTGCCGACGGCTGTCGTAGCTGTAGCTAACCCAAGTTCTTGCTTTGAAAATGTGTTCAGACCCCCCGAAAGAGGAGAGGATTACACCATTTTACAAGCAATCTTCAGCATAGATATGTTGATTCTGTTTGTTGCCACAATTTGTGGGACTGGTGGGACTTTGACTGCAATAGACAACTTGGGTCAGATAGGCAGCTCCCTTGGCTACTCAACTCATAGCATTTCTACTTTCACTTCCCTCGTGAGCATATGGGGCTTTCTGGGTCGAGCATTTTCGGGTTATGCTTCTGAATTCTTATGGACAAAGTATAACTTCTCACGCCCTCTGTTCCTCACTCTTGTGCTTCTTCTCTCTTGTATTGGTCATCTTCTAATTGCCTTTGGAGTCCCAACCTCCCTTTACTTTGCTTCAGTGATCATTGGATTTTGCTTTGGAGCACAATGGCCATTGATTTTCGCTATTGTATCTGAATTATTTGGCCTAAAATACTATGCAACTTTGTACAGCATAAGCGGAATTGCTAGCCCAGTTGGCACATACATTTTCAGTGTCAAAGTGGCTGGCTATTTGTATGACGAAGAGGCTAGAAGGCAAATGGCAGCCATTGGGCTTAGAAGAGTAGCTGGAGACTTAGCCTGCAAGGGCGTCCAATGTTACAGATTAGCTTTTCTTATAATCAGTGCTGCAACCGTGTTCGGTTGTATTGTTTCATTCATTTTGGTGCTTCGGACTTGGGAATTCTACAAGGGTGATATCTATAAGAAGTTTAGAGAGGAAACAAAGGAAGCAGAA 1719 44.62 GGARLRIWSGSGRRQMRNFALQVLLGRWFTVFASLLIMAVSGATYMFGLYSADIKSSLGYDQTTLNLLGFFKDLGANVGVLSGLINEITPPWVVLFIGGVMNFFGYFMIWLSVTQRIAKPKVPAMCLYICLGANSQTYANTGALIPSVKNFPEYRGNVLGLLKGFVGLSGAILTQLYHAFYGDDSKDFILLIAWLPTAVSFLLLRIVRVVEVDQRSKSNDLKIFYHLLYISLGLACFLMILIIIQNELVFTRIQYLGCALILLVLLFLPLAVVITEEFSIKKRKLQALNVTSWLSDPSPAELPSSRPPHLPTAVVAVANPSSCFENVFRPPERGEDYTILQAIFSIDMLILFVATICGTGGTLTAIDNLGQIGSSLGYSTHSISTFTSLVSIWGFLGRAFSGYASEFLWTKYNFSRPLFLTLVLLLSCIGHLLIAFGVPTSLYFASVIIGFCFGAQWPLIFAIVSELFGLKYYATLYSISGIASPVGTYIFSVKVAGYLYDEEARRQMAAIGLRRVAGDLACKGVQCYRLAFLIISAATVFGCIVSFILVLRTWEFYKGDIYKKFREETKEAE 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11935173 11936891 + MC01g0560 Mch1g0852 675744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0852 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 26 566 - GO:0016020(PANTHER)
Mch1g0852 573 SUPERFAMILY MFS general substrate transporter 28 556 IPR036259 -
Mch1g0852 573 Pfam Major Facilitator Superfamily 353 551 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Mch1g0852 573 CDD MFS_Mch1p_like 26 543 - -
Mch1g0852 573 Gene3D MFS general substrate transporter like domains 326 556 IPR036259 -
Mch1g0852 573 Pfam Nodulin-like 27 274 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0852 Mch-Chr1:11935173 Mch3g0550 Mch-Chr3:9648891 4.31E-217 dispersed
Mch1g0852 Mch-Chr1:11935173 Mch4g2023 Mch-Chr4:22522542 6.05E-223 wgd
Mch1g0852 Mch-Chr1:11935173 Mch5g1718 Mch-Chr5:17874044 1.54E-265 wgd
Mch1g0852 Mch-Chr1:11935173 Mch9g1814 Mch-Chr9:19936996 1.73E-240 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0852 - - - 0.0