Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch1g0879 | ATGTCTTCCGCTCTCTGTTTTCCGTCACTCTCCTTTTCATCTGCTCACCTCCATAAGCGAGGCCCTCTCCGGCGAAGAATCCCACCTCCATTTCTCTCCATCAAATCCTCCATTGACGAAGGGAATCCCCCCACACCCACGAAGCTTAAGAACTCCACCAACAATGCCAAATCCGGTTCCTGGGTCAGCCCGGATTGGCTCACCTCTCTGACTCGCTACATTACCCTAGGGCAGGGCGATGACTCCGGCATTCCAATAGCAAGTGCCAAGCTCGACGACGTTTCTGATCTTCTGGGCGGTGCTCTTTTCCTCCCACTCTTCAAGTGGATGAATGATTATGGACCGATTTACAGGCTCGCGGCTGGCCCTAGAAATTTCGTGGTGGTTAGTGACCCTGCCATTGCTAAGCATGTTCTCAGGAATTACGGAACCTATGCCAAGGGGCTTGTTTCTGAGGTATCTGAGTTCTTGTTCGGGTCTGGTTTCGCGATTGCTGAAGGCCCGCTTTGGACGGTTCGCCGTAGGGCTGTGGTTCCATCCCTTCACAAGAAGTACTTATCGGTTATTGTTGATCGAGTATTCTGTAAATGTGCCATGAGATTGGTGGAGAAGCTGCAAAAGGATGCATTAAATAATAATTCTGTTAACATGGAGGAAAAGTTTTCTCAACTAACTCTTGATATTATTGGTCTATCTGTATTCAACTACAGTTTTGATTCTCTCTCTGCTGACAGCCCTGTGATTGATGCAGTTTACACTGCCTTGAAAGAGGCAGAGGCTCGTTCTACTGATATTTTACCATATTGGAAGGCAGGTTCCTTATATTGTTCTGCTTATGAACACCATTTTTTCCAACTCATTTTTCACTTTTGCTTTTTGTTGTTGCAGATTAAAGCTCTGTGTAAGATAATCCCAAGACAGATAAAAGCTGAAGAAGCAGTTACTGTGATCAGGAGAACCGTTGAGGAACTAATTGCCAAGTGTAAAGAAATTGTGGAAACTGAGGGTGAGCGTATTGATGAGGAGGAATATGTGAATGACACTGATCCAAGCATCCTTCGTTTTCTGCTGGCCAGTAGGCAAGAGGTCTCAAGTGTACAATTACGAGACGATCTCTTGTCAATGTTAGTTGCTGGACATGAAACTACCGGTTCTGTTCTGACTTGGACACTCTATCTTTTAAGTAAGGATTCCTCATCATTGATCAAGGCACAAAATGAAGTTGATAGAGTCTTACAAGGAAGACCTCCTTCCTACGAAGACACAAAGGAACTTAAATTTTTGATGCGTTGTATCCTTGAGTCAATGCGGCTTTACCCACATCCACCTGTTTTGATAAGAAGAGCTCGAGTTGCTGACATACTGCCTGGAAATTACAAGGTTAATGCTGGTCAAGATATCATGATTTCAGTATATAATATCCATCGCTCTTCCCAGGTTTGGGAACAAGCAGAAGAGTTTATACCTGAAAGATTTGACTTGGAAGGTCCTGTGCCGAATGAAAGCAATACAGATTTCAGATTTATTCCATTCAGCGGAGGGCCCCGTAAGTGTGTTGGTGATCAATTTGCCCTGCTTGAAGCTGTCGTTGCTCTTGCCATATTTTTGCAGCACATGAACTTTGAGCTGGTTCCAAATCAGACCATTGGGATGACCACCGGAGCAACTATACATACAACAAATGGTTTGTACATGAAACTCAGCCAAAGGCAGCTGACTCCAGAATTAGCTTCCTCTGCTTCTTTAAGGTAA | 1752 | 44.46 | MSSALCFPSLSFSSAHLHKRGPLRRRIPPPFLSIKSSIDEGNPPTPTKLKNSTNNAKSGSWVSPDWLTSLTRYITLGQGDDSGIPIASAKLDDVSDLLGGALFLPLFKWMNDYGPIYRLAAGPRNFVVVSDPAIAKHVLRNYGTYAKGLVSEVSEFLFGSGFAIAEGPLWTVRRRAVVPSLHKKYLSVIVDRVFCKCAMRLVEKLQKDALNNNSVNMEEKFSQLTLDIIGLSVFNYSFDSLSADSPVIDAVYTALKEAEARSTDILPYWKAGSLYCSAYEHHFFQLIFHFCFLLLQIKALCKIIPRQIKAEEAVTVIRRTVEELIAKCKEIVETEGERIDEEEYVNDTDPSILRFLLASRQEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDSSSLIKAQNEVDRVLQGRPPSYEDTKELKFLMRCILESMRLYPHPPVLIRRARVADILPGNYKVNAGQDIMISVYNIHRSSQVWEQAEEFIPERFDLEGPVPNESNTDFRFIPFSGGPRKCVGDQFALLEAVVALAIFLQHMNFELVPNQTIGMTTGATIHTTNGLYMKLSQRQLTPELASSASLR | 583 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 12161655 | 12170642 | - | MC01g0584 | Mch1g0879 | 675771 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch1g0879 | 583 | SUPERFAMILY | Cytochrome P450 | 99 | 570 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | CDD | CYP97 | 104 | 564 | - | - | |
| Mch1g0879 | 583 | MobiDBLite | consensus disorder prediction | 38 | 59 | - | - | |
| Mch1g0879 | 583 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 511 | 520 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch1g0879 | 583 | Gene3D | Cytochrome P450 | 85 | 581 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | PRINTS | E-class P450 group I signature | 367 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | PRINTS | E-class P450 group I signature | 387 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | PRINTS | E-class P450 group I signature | 518 | 541 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | PRINTS | E-class P450 group I signature | 110 | 129 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | PRINTS | E-class P450 group I signature | 470 | 494 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | PRINTS | E-class P450 group I signature | 508 | 518 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | Pfam | Cytochrome P450 | 106 | 553 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | PRINTS | P450 superfamily signature | 518 | 529 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | PRINTS | P450 superfamily signature | 509 | 518 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | PRINTS | P450 superfamily signature | 378 | 395 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | PRINTS | P450 superfamily signature | 430 | 441 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g0879 | 583 | PANTHER | CYTOCHROME P450 FAMILY 4 | 101 | 568 | IPR050196 | GO:0009507(PANTHER)|GO:0009974(PANTHER)|GO:0016117(PANTHER) | |
| Mch1g0879 | 583 | MobiDBLite | consensus disorder prediction | 34 | 59 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch10g0629 | Mch-Chr10:4294890 | Mch1g0879 | Mch-Chr1:12161655 | 1.15E-144 | dispersed | |
| Mch10g0959 | Mch-Chr10:6819679 | Mch1g0879 | Mch-Chr1:12161655 | 8.64E-124 | dispersed | |
| Mch1g0879 | Mch-Chr1:12161655 | Mch8g1293 | Mch-Chr8:9398567 | 1.27E-35 | dispersed | |
| Mch1g0879 | Mch-Chr1:12161655 | Mch6g0068 | Mch-Chr6:397319 | 2.07E-27 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch1g0879 | K09837 | - | csv:101204961 | 996.882 |