Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch1g0907 | ATGGGATCTGGTACTTGTGAAATTGTTGAAGCAAGGGAAGAAATTAACCCGGTTCAAACTAAGGTAGGATCTCGTCACTCAGAGTTTGTATCAAATGACAGAGATCGGAAACTTTCTGCTCTGAAAATTGGATTCAAGGGATCTCTAGAGGATGATATCAATCAGCTTTTTGAGTCAATTAATATTAAAAATTCATCCAAGAGTTTGGGTCATTCGCAAGTAGAGGCAAGTGCACTAAGAAAAAGTACCCTAAAGAAGCCAATTACTGTTGGCATGCCTCGTTCACCAGGTATTGGGACTTCTGATACTGGTAGTCTTAAGCAAGCACTCAGGGACTTATGCCTTTCAAAGGCATCTGAAATGGCTGTGATGAAAAGATCATCAAAATCAGCTAGCTCTTCAAGAATCTCAGAAGCTGGACGGATCAAGACATTGTACAATTCAGTTATGGTTGAAGCCACTCAATCAGGCTCTTCTTCGAACAACGGTAAGGGGAGTGTGGTTGAAATATCCCTGGTTCCAGAGGAAAAGAAGTTCAACTTAGGGAAGAGTCTTGGGCATGTTCAGGCATCCTCTGTTGAATTGTCCGCCGAAAGTGCTGATTGTTCTCCTCAGTTACCAGTTACGGAAACACAAACTTCTATTGAGGTTGTTGCTGTGGAACAAAATGTGAATACACAAACTCCTCAGTTACCAGTTTCCACGACGTTGTCAAGGAAAGTTGGATCTCAAACATTGAAGGCAGAGCTGGAAAAGGAAGAGGAGTCCACAACTCCTCCATCTATATCTTCTTGCACTATTGGCAAGGTTTTAGAGAAGGAGAAGAAAATTCTTGCCTCAAGCAGGGTAGCAAATAAAGCGTCATCATCAAAGCCAGGACGGAAAGGCAGGCTGCACACTGCATCTTCATCTAAGTTGGTTAATGGCAATAAGGTAGGCAAGTTATCTAGAAGTACCTCCCGTTCTGTGAAACCGGTTATTAGGAATAAGGGGTTGGCCAAGAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGTAGTTCAAGCACATACAATGCAGTCAATGGTGATATGGATCCTAGTAAAAAGACGTTAATATGTGAGAGATGCCACTGTGCATTGAATAGTGCAACTAAAGACTCAAAGAAGGGTTCTGCTTCACAGTTTGCTGGTCTTAGTACTGATGTGAACGTGACTAATTCAAAATCTGGTGCTAACAAATCGGGCATCGCGGTGGATGGCAAGGCTTCTGATGTTAGAGTTAAAAGGAACACAAAGGTACGAGATAAGGGTGAATTTTCTCAAAGCTCAAAAAGTAGCCAAGGTGATTACAGTAGCAGTACAACGAGTATTATAAGTGATGACAGCAATGGGCATGGATCCAGTAACGGTAGCAGACCTCACATGTCAAAAGATGTTAGGTGGGAAGCCATACGCCATTCACAAATGCAGCATGGGATCCTCAGCTTGCGGCATTTCAATCTTTTAAAGAAACTTGGTTGCGGGGACATTGGAACTGTGTATCTTGCCGAGTTAACTGGCACTAATTGCTTATTTGCCATTAAGGTCATGGACAATGAGTTTCTAGCAAGAAGGAAGAAAATGCCCAGAGCGCAAACCGAGAGAGAAATACTTAGAATGCTGGATCATCCATTCCTCCCAACACTTTATGTTCAATTTACTTCAGATAATCTATCATGTCTTGTTATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTGCGGCAGAAGCAGCTAGGCAGAGTCTTTCCTGAACCTGCTGCAAGATTTTATGTTGCTGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTATTTATCGAGATTTAAAACCTGAAAACATTCTTGTCAGGGAAGACGGTCACATTATGCTTACCGACTTTGACCTATCGCTTAGGTGCACAGTCAGTCCAACACTTCTGAAGTCAGCATCCTTCAATGCAGGCTCAGTGAAGACATCAGGTCCATGTACAGATTCTAGTTGTGCCGAGCCGTTTTGTATTGAACCATCATGTCAAGTTCCATGCTTCAGCCCAAGATTCTTACCTGCTGCCCCCAAGACAAGGAAGTCCAAACCCGACCTTGCAACACAGGTCAGGTCATTGCCACAGCTCGTTGCTGAACCCACCGATGCACGATCCAATTCCTTCGTTGGGACTCATGAATATTTGGCTCCCGAGATCATTAAAGGGGAGGGTCATGGAGCTGCAGTTGATTGGTGGACATTCGGTGTCTTTCTCTACGAGCTTCTATATGGCCGAACCCCTTTCAAGGGTTCCAACAATGAAGAAACACTGGCCAATGTGATAATGCAGGGCCTTAGTTTCCCGGACAGTCCATTTGTTAGTTTCCAAGCAAGGGATCTTATCCGAGGTCTGTTGGTAAAGGAACCCGAGAACCGATTCGGGTCAGAGAAAGGGGCAGCCGAGATCAAGCAGCATCCATTTTTCGAGGGGCTAAACTGGGCATTGATCCGTTGTGCAATTCCTCCAGAACTTCCAGACTTATGTGATATGGACATTCCAAGCATGATTGCTCAACAAAACAAGTTCAGGTATTTGGAAAGCAAGTCCACTGGAGAACACCTGGAGTTTGAATTGTTTTAG | 2634 | 43.77 | MGSGTCEIVEAREEINPVQTKVGSRHSEFVSNDRDRKLSALKIGFKGSLEDDINQLFESINIKNSSKSLGHSQVEASALRKSTLKKPITVGMPRSPGIGTSDTGSLKQALRDLCLSKASEMAVMKRSSKSASSSRISEAGRIKTLYNSVMVEATQSGSSSNNGKGSVVEISLVPEEKKFNLGKSLGHVQASSVELSAESADCSPQLPVTETQTSIEVVAVEQNVNTQTPQLPVSTTLSRKVGSQTLKAELEKEEESTTPPSISSCTIGKVLEKEKKILASSRVANKASSSKPGRKGRLHTASSSKLVNGNKVGKLSRSTSRSVKPVIRNKGLAKKKVKQDLSSPTCSSSTYNAVNGDMDPSKKTLICERCHCALNSATKDSKKGSASQFAGLSTDVNVTNSKSGANKSGIAVDGKASDVRVKRNTKVRDKGEFSQSSKSSQGDYSSSTTSIISDDSNGHGSSNGSRPHMSKDVRWEAIRHSQMQHGILSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVSPTLLKSASFNAGSVKTSGPCTDSSCAEPFCIEPSCQVPCFSPRFLPAAPKTRKSKPDLATQVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVIMQGLSFPDSPFVSFQARDLIRGLLVKEPENRFGSEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCDMDIPSMIAQQNKFRYLESKSTGEHLEFELF | 877 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12399390 | 12404768 | - | MC01g0608 | Mch1g0907 | 675799 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch1g0907 | 877 | Gene3D | Transferase(Phosphotransferase) domain 1 | 719 | 844 | - | - | |
Mch1g0907 | 877 | FunFam | serine/threonine-protein kinase D6PK-like | 721 | 844 | - | - | |
Mch1g0907 | 877 | MobiDBLite | consensus disorder prediction | 416 | 433 | - | - | |
Mch1g0907 | 877 | SMART | serkin_6 | 493 | 826 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch1g0907 | 877 | Gene3D | Transferase(Phosphotransferase) domain 1 | 573 | 642 | - | - | |
Mch1g0907 | 877 | MobiDBLite | consensus disorder prediction | 396 | 469 | - | - | |
Mch1g0907 | 877 | MobiDBLite | consensus disorder prediction | 85 | 104 | - | - | |
Mch1g0907 | 877 | CDD | STKc_phototropin_like | 491 | 847 | - | - | |
Mch1g0907 | 877 | ProSiteProfiles | Protein kinase domain profile. | 493 | 826 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch1g0907 | 877 | MobiDBLite | consensus disorder prediction | 434 | 468 | - | - | |
Mch1g0907 | 877 | FunFam | Serine/threonine-protein kinase D6PK-like | 491 | 576 | - | - | |
Mch1g0907 | 877 | FunFam | serine/threonine-protein kinase D6PK-like | 577 | 644 | - | - | |
Mch1g0907 | 877 | PANTHER | FLIPPASE KINASE 1-RELATED | 317 | 851 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Mch1g0907 | 877 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 614 | 626 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch1g0907 | 877 | MobiDBLite | consensus disorder prediction | 295 | 323 | - | - | |
Mch1g0907 | 877 | SUPERFAMILY | Protein kinase-like (PK-like) | 467 | 843 | IPR011009 | - | |
Mch1g0907 | 877 | Pfam | Protein kinase domain | 494 | 644 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch1g0907 | 877 | Pfam | Protein kinase domain | 723 | 826 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch1g0907 | 877 | Gene3D | Phosphorylase Kinase; domain 1 | 491 | 572 | - | - | |
Mch1g0907 | 877 | MobiDBLite | consensus disorder prediction | 281 | 323 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch1g0907 | Mch-Chr1:12399390 | Mch2g0266 | Mch-Chr2:2006236 | 1.64E-230 | dispersed | |
Mch10g1003 | Mch-Chr10:7175560 | Mch1g0907 | Mch-Chr1:12399390 | 1.22E-98 | transposed | |
Mch1g0907 | Mch-Chr1:12399390 | Mch2g0265 | Mch-Chr2:1980006 | 7.32E-120 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77117 | PF00069 | Pkinase | 5.70E-36 | CL0016 | Mch | PK |
Pathway information
