Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0907 ATGGGATCTGGTACTTGTGAAATTGTTGAAGCAAGGGAAGAAATTAACCCGGTTCAAACTAAGGTAGGATCTCGTCACTCAGAGTTTGTATCAAATGACAGAGATCGGAAACTTTCTGCTCTGAAAATTGGATTCAAGGGATCTCTAGAGGATGATATCAATCAGCTTTTTGAGTCAATTAATATTAAAAATTCATCCAAGAGTTTGGGTCATTCGCAAGTAGAGGCAAGTGCACTAAGAAAAAGTACCCTAAAGAAGCCAATTACTGTTGGCATGCCTCGTTCACCAGGTATTGGGACTTCTGATACTGGTAGTCTTAAGCAAGCACTCAGGGACTTATGCCTTTCAAAGGCATCTGAAATGGCTGTGATGAAAAGATCATCAAAATCAGCTAGCTCTTCAAGAATCTCAGAAGCTGGACGGATCAAGACATTGTACAATTCAGTTATGGTTGAAGCCACTCAATCAGGCTCTTCTTCGAACAACGGTAAGGGGAGTGTGGTTGAAATATCCCTGGTTCCAGAGGAAAAGAAGTTCAACTTAGGGAAGAGTCTTGGGCATGTTCAGGCATCCTCTGTTGAATTGTCCGCCGAAAGTGCTGATTGTTCTCCTCAGTTACCAGTTACGGAAACACAAACTTCTATTGAGGTTGTTGCTGTGGAACAAAATGTGAATACACAAACTCCTCAGTTACCAGTTTCCACGACGTTGTCAAGGAAAGTTGGATCTCAAACATTGAAGGCAGAGCTGGAAAAGGAAGAGGAGTCCACAACTCCTCCATCTATATCTTCTTGCACTATTGGCAAGGTTTTAGAGAAGGAGAAGAAAATTCTTGCCTCAAGCAGGGTAGCAAATAAAGCGTCATCATCAAAGCCAGGACGGAAAGGCAGGCTGCACACTGCATCTTCATCTAAGTTGGTTAATGGCAATAAGGTAGGCAAGTTATCTAGAAGTACCTCCCGTTCTGTGAAACCGGTTATTAGGAATAAGGGGTTGGCCAAGAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGTAGTTCAAGCACATACAATGCAGTCAATGGTGATATGGATCCTAGTAAAAAGACGTTAATATGTGAGAGATGCCACTGTGCATTGAATAGTGCAACTAAAGACTCAAAGAAGGGTTCTGCTTCACAGTTTGCTGGTCTTAGTACTGATGTGAACGTGACTAATTCAAAATCTGGTGCTAACAAATCGGGCATCGCGGTGGATGGCAAGGCTTCTGATGTTAGAGTTAAAAGGAACACAAAGGTACGAGATAAGGGTGAATTTTCTCAAAGCTCAAAAAGTAGCCAAGGTGATTACAGTAGCAGTACAACGAGTATTATAAGTGATGACAGCAATGGGCATGGATCCAGTAACGGTAGCAGACCTCACATGTCAAAAGATGTTAGGTGGGAAGCCATACGCCATTCACAAATGCAGCATGGGATCCTCAGCTTGCGGCATTTCAATCTTTTAAAGAAACTTGGTTGCGGGGACATTGGAACTGTGTATCTTGCCGAGTTAACTGGCACTAATTGCTTATTTGCCATTAAGGTCATGGACAATGAGTTTCTAGCAAGAAGGAAGAAAATGCCCAGAGCGCAAACCGAGAGAGAAATACTTAGAATGCTGGATCATCCATTCCTCCCAACACTTTATGTTCAATTTACTTCAGATAATCTATCATGTCTTGTTATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTGCGGCAGAAGCAGCTAGGCAGAGTCTTTCCTGAACCTGCTGCAAGATTTTATGTTGCTGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTATTTATCGAGATTTAAAACCTGAAAACATTCTTGTCAGGGAAGACGGTCACATTATGCTTACCGACTTTGACCTATCGCTTAGGTGCACAGTCAGTCCAACACTTCTGAAGTCAGCATCCTTCAATGCAGGCTCAGTGAAGACATCAGGTCCATGTACAGATTCTAGTTGTGCCGAGCCGTTTTGTATTGAACCATCATGTCAAGTTCCATGCTTCAGCCCAAGATTCTTACCTGCTGCCCCCAAGACAAGGAAGTCCAAACCCGACCTTGCAACACAGGTCAGGTCATTGCCACAGCTCGTTGCTGAACCCACCGATGCACGATCCAATTCCTTCGTTGGGACTCATGAATATTTGGCTCCCGAGATCATTAAAGGGGAGGGTCATGGAGCTGCAGTTGATTGGTGGACATTCGGTGTCTTTCTCTACGAGCTTCTATATGGCCGAACCCCTTTCAAGGGTTCCAACAATGAAGAAACACTGGCCAATGTGATAATGCAGGGCCTTAGTTTCCCGGACAGTCCATTTGTTAGTTTCCAAGCAAGGGATCTTATCCGAGGTCTGTTGGTAAAGGAACCCGAGAACCGATTCGGGTCAGAGAAAGGGGCAGCCGAGATCAAGCAGCATCCATTTTTCGAGGGGCTAAACTGGGCATTGATCCGTTGTGCAATTCCTCCAGAACTTCCAGACTTATGTGATATGGACATTCCAAGCATGATTGCTCAACAAAACAAGTTCAGGTATTTGGAAAGCAAGTCCACTGGAGAACACCTGGAGTTTGAATTGTTTTAG 2634 43.77 MGSGTCEIVEAREEINPVQTKVGSRHSEFVSNDRDRKLSALKIGFKGSLEDDINQLFESINIKNSSKSLGHSQVEASALRKSTLKKPITVGMPRSPGIGTSDTGSLKQALRDLCLSKASEMAVMKRSSKSASSSRISEAGRIKTLYNSVMVEATQSGSSSNNGKGSVVEISLVPEEKKFNLGKSLGHVQASSVELSAESADCSPQLPVTETQTSIEVVAVEQNVNTQTPQLPVSTTLSRKVGSQTLKAELEKEEESTTPPSISSCTIGKVLEKEKKILASSRVANKASSSKPGRKGRLHTASSSKLVNGNKVGKLSRSTSRSVKPVIRNKGLAKKKVKQDLSSPTCSSSTYNAVNGDMDPSKKTLICERCHCALNSATKDSKKGSASQFAGLSTDVNVTNSKSGANKSGIAVDGKASDVRVKRNTKVRDKGEFSQSSKSSQGDYSSSTTSIISDDSNGHGSSNGSRPHMSKDVRWEAIRHSQMQHGILSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVSPTLLKSASFNAGSVKTSGPCTDSSCAEPFCIEPSCQVPCFSPRFLPAAPKTRKSKPDLATQVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVIMQGLSFPDSPFVSFQARDLIRGLLVKEPENRFGSEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCDMDIPSMIAQQNKFRYLESKSTGEHLEFELF 877
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 12399390 12404768 - MC01g0608 Mch1g0907 675799
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0907 877 Gene3D Transferase(Phosphotransferase) domain 1 719 844 - -
Mch1g0907 877 FunFam serine/threonine-protein kinase D6PK-like 721 844 - -
Mch1g0907 877 MobiDBLite consensus disorder prediction 416 433 - -
Mch1g0907 877 SMART serkin_6 493 826 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g0907 877 Gene3D Transferase(Phosphotransferase) domain 1 573 642 - -
Mch1g0907 877 MobiDBLite consensus disorder prediction 396 469 - -
Mch1g0907 877 MobiDBLite consensus disorder prediction 85 104 - -
Mch1g0907 877 CDD STKc_phototropin_like 491 847 - -
Mch1g0907 877 ProSiteProfiles Protein kinase domain profile. 493 826 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g0907 877 MobiDBLite consensus disorder prediction 434 468 - -
Mch1g0907 877 FunFam Serine/threonine-protein kinase D6PK-like 491 576 - -
Mch1g0907 877 FunFam serine/threonine-protein kinase D6PK-like 577 644 - -
Mch1g0907 877 PANTHER FLIPPASE KINASE 1-RELATED 317 851 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Mch1g0907 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g0907 877 MobiDBLite consensus disorder prediction 295 323 - -
Mch1g0907 877 SUPERFAMILY Protein kinase-like (PK-like) 467 843 IPR011009 -
Mch1g0907 877 Pfam Protein kinase domain 494 644 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g0907 877 Pfam Protein kinase domain 723 826 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g0907 877 Gene3D Phosphorylase Kinase; domain 1 491 572 - -
Mch1g0907 877 MobiDBLite consensus disorder prediction 281 323 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0907 Mch-Chr1:12399390 Mch2g0266 Mch-Chr2:2006236 1.64E-230 dispersed
Mch10g1003 Mch-Chr10:7175560 Mch1g0907 Mch-Chr1:12399390 1.22E-98 transposed
Mch1g0907 Mch-Chr1:12399390 Mch2g0265 Mch-Chr2:1980006 7.32E-120 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77117 PF00069 Pkinase 5.70E-36 CL0016 Mch PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0907 - - - 0.0