Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0911 ATGAAGCTGCACGAGAATCTACTTATATTTGTGTTGGTTATTTGGCTGGTGGCTTCATTAATGATCCAGGGCTCAGACCACCATGAAAGGAAGCCTTATATCGTGTATATGGGAGAGCTGCCGCTCGGATCTCGGTCCACGGTGGCGGATCACCACCACAGCTTGCTTTTGGACGCCATTGGAGATGAAAAGACAGCGAGAGAGTCGAAAATCCACAGCTACGGAAAGAGCTTCAATGGGTTCGCGGCCAGACTGTTGCCTCACGAAGCCGACAAGATCTCAAAACGTGAGGATGTGGTTTCGGTGTTCCGGAGCAGAAAGCAAAGAATTGTAACGACAAGATCCTGGGACTTTTTGGGACTCAATAAACGCTCTAAACGTAACCCTTCCCTTGAGGCTAATCTCATTGTCGCTGTTTTGGATACAGGGATTTGGATAAATAGTCCTAGCTTCAGTGACAAAGGGTACGGGCCCCCTCCCGCCAAATGGAAGGGCAAATGCGTAACTGGCGCCAACTTCAGCGCCTGCAACAACAAAGTGATAGGCGCGGCATACTTCGATCTGGACGACCAAAACCCAGCTGCGGCGAGGAGCGTGGCGGACACGGAGGGCCATGGGTCCCACACCGCGTCCACGGTGGCGGGGTCTGCGGTGGAGGGTGCCAGCCTGTACGGGCTGGCCAGAGGGACGGCTCGGGGCGGGGTGCCATCGGCTCGGATCGCGGTCTACAAAGTGTGCTGGAGTATCTTTTGCAGCGAGATGGACGTGCTGGCCGGGTTCGACCAGGCCATCGCGGACGGCGTGGATTTGATTTCCGTCTCCATCGGCTCCCCGCCGATGGACCTCTTCAGGGACAGCCAGGCCATTGGGGCTTTTCACGCCATGAAGAAGGGGATTTTGACCTCCTCCGCCGCCGGCAACTACGGCCCCCAGTTGTCCACCGTCGAGAATGTCGCGCCCTGGATCATGACCGTCGCTGCAACCGCCATTGATCGAAGATTCATCACCGTTCTCCAACTCGGTAATGGCAGCAAATTTACTGGATTCTCCATCAACACTTTCTCGGGGGGCAAACAAATGCAGCCTCTAACCAGCGGGGCCAAGGCTGCCAACGCTACCGCCGGATCCAACCGAGGAAACGCAAGTGCTTGTGATGCCGAAGCTCTTAGCCAGAGCAAAGTGAAGGGAAGGATTGTGTATTGCCTTGGAAATTACGCAGACCCCAACATCAAATCCTTGGGAGGCGTTGGAGTCATTCAACTTCTTCAACCACAAACTGATTATTCCTCTATCCTCGTTCTCCCCGGGGCTGCCATCCCTTCTATCTCTGGCAAATCTGTTGATCTCTATATCAACTCCACCAAGAATCCTAGAGCTGTCATCTATAAGAGTAGAACTATAAAAATCACTGCTCCTTTTGTTGCCTCTTTCTCATCTAGAGGGCCGCAGTCAATCACCCGCAACATTCTCAAGCCTGATCTTGCTGCACCAGGGATAGACATCTTGGCTGCTTATACAGAATTGGCGAGCTTAACAGGGGACACGTCCGACAGTAGATATAGTTTATTCAAGGTAATGGCAGGTACATCCATGGCTTGTCCTCATGCCACCGCGGCTGCTGCCTATGTTAAGTCGTTCCACCCCGATTGGTCTCCTGCTGCTGTCAAGTCTGCTCTCATGACGACTGCGACTCCAATGAAGATCAAATTCAAGGAAGCTGAGCTTGGCTCTGGAGCAGGACAAATAAATCCGACAAGGGCAGTGCATCCAGGCCTTGTTTATGATATTTCACTCAACTCCTACGTCTCTTTCCTCTGCAAACAAGGCTACAACAGCACAGCAATTGGCCTAATTGTTGGTAGCAAGAAGTATAACTGCTCCATGTTGAAGCCTGCACGAGGCACCGATGGACTTAACTACCCTACAATGCACCAACAGCTCTCCGATCCTAGTTCTGCCATTGACGCGGTCTTTTATCGGACAGTGACTAATGTCGGGTACGGAGCATCGTTGTACAGGGCAAATATAACATCCCCAGATGGCCTCTCTGTCAAAGTTTTCCCAGACACTCTTAATTTTGCTAAGTCACACGAAAGGAAGACATTTAAAGTTGTGGTGAAGGGAAATCCTATGCCAAAAGGAATACAGATTCTATCAGCTTTGCTTGAGTGGACCGATTCTAAACACATCGTTACAAGCAATATTCTCATCTGTAGGCAGTTATTGATGTAA 2232 51.25 MKLHENLLIFVLVIWLVASLMIQGSDHHERKPYIVYMGELPLGSRSTVADHHHSLLLDAIGDEKTARESKIHSYGKSFNGFAARLLPHEADKISKREDVVSVFRSRKQRIVTTRSWDFLGLNKRSKRNPSLEANLIVAVLDTGIWINSPSFSDKGYGPPPAKWKGKCVTGANFSACNNKVIGAAYFDLDDQNPAAARSVADTEGHGSHTASTVAGSAVEGASLYGLARGTARGGVPSARIAVYKVCWSIFCSEMDVLAGFDQAIADGVDLISVSIGSPPMDLFRDSQAIGAFHAMKKGILTSSAAGNYGPQLSTVENVAPWIMTVAATAIDRRFITVLQLGNGSKFTGFSINTFSGGKQMQPLTSGAKAANATAGSNRGNASACDAEALSQSKVKGRIVYCLGNYADPNIKSLGGVGVIQLLQPQTDYSSILVLPGAAIPSISGKSVDLYINSTKNPRAVIYKSRTIKITAPFVASFSSRGPQSITRNILKPDLAAPGIDILAAYTELASLTGDTSDSRYSLFKVMAGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKFKEAELGSGAGQINPTRAVHPGLVYDISLNSYVSFLCKQGYNSTAIGLIVGSKKYNCSMLKPARGTDGLNYPTMHQQLSDPSSAIDAVFYRTVTNVGYGASLYRANITSPDGLSVKVFPDTLNFAKSHERKTFKVVVKGNPMPKGIQILSALLEWTDSKHIVTSNILICRQLLM 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12431655 12439565 - MC01g0612 Mch1g0911 675803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0911 743 CDD Peptidases_S8_3 112 564 IPR034197 -
Mch1g0911 743 Gene3D - 605 739 - -
Mch1g0911 743 SUPERFAMILY Subtilisin-like 8 632 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch1g0911 743 Pfam Fibronectin type-III domain 638 737 IPR041469 -
Mch1g0911 743 Gene3D - 331 467 - -
Mch1g0911 743 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Mch1g0911 743 PRINTS Subtilisin serine protease family (S8) signature 527 543 IPR015500 -
Mch1g0911 743 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Mch1g0911 743 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 110 IPR037045 -
Mch1g0911 743 ProSiteProfiles Serine proteases, subtilase domain profile. 115 588 - -
Mch1g0911 743 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 725 IPR045051 -
Mch1g0911 743 Pfam Peptidase inhibitor I9 33 107 IPR010259 -
Mch1g0911 743 ProSitePatterns Serine proteases, subtilase family, serine active site. 528 538 IPR023828 -
Mch1g0911 743 CDD PA_subtilisin_like 337 461 - -
Mch1g0911 743 FunFam Subtilisin-like protease SBT5.3 21 111 - -
Mch1g0911 743 Gene3D Peptidase S8/S53 domain 135 601 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Mch1g0911 743 Pfam Subtilase family 134 567 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Mch1g0911 743 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 137 147 IPR023827 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0911 Mch-Chr1:12431655 Mch9g1268 Mch-Chr9:14565197 5.54E-227 dispersed
Mch2g1886 Mch-Chr2:19008281 Mch1g0911 Mch-Chr1:12431655 1.12E-223 transposed
Mch2g1906 Mch-Chr2:19488256 Mch1g0911 Mch-Chr1:12431655 2.25E-212 transposed
Mch2g1934 Mch-Chr2:20016660 Mch1g0911 Mch-Chr1:12431655 1.10E-179 transposed
Mch9g1868 Mch-Chr9:20387387 Mch1g0911 Mch-Chr1:12431655 3.96E-70 transposed
Mch1g0911 Mch-Chr1:12431655 Mch5g1630 Mch-Chr5:17146794 2.12E-264 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0911 - - - 0.0