Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0977 ATGGGGGTTCCACAGACGATGGAAATTCTGAGCCAGAGAGCCGTACTTGTGAGAGAGTCGCTGCAGAAGAGCCAGACTGTAACAGAGAACATGGTCTCCATTCTTGGCTCCTTCGACTACCGCCTCTCCGCTCTCGAAACCGCAATGCGGCCCACTCAGATAAGAACTCATTCAATTCGGAGGGCGCATGAGAATATTGAGAAGACATTGAAGACTGCAGAAAGTATGCTAGCTCAGTTTGATCTTACGCGCAAGGCTGAGGCTAAAATACTCAGGGGGCCACATGAGGACTTAGAGAGCTACTTGGAAGCAATTGATCAACTACGAAGCACAAATCGCTTCTTCACTGGGAACAAAAATTTCAAAAGTAGCGATACTATTATTATCCACACCACCAATTTGCTTGCTAAAGCCATTTCAAAGCTAGAAGATGAGTTCAGACAGCTTTTAACAAATTACAGTAAACCAGTGGAACCTGATCGTCTTTTCGATTGTCTTCCCAACTCTTTGCGTCCATCGTCAGCATCTCAGCAAGGTGATAGTGGTAGCAAACACGACCACGCCAACAAAAGCTTAGAAGCTGCCGTCTTCATACCCCCAACTCTTATTCCTCCCAGGGTTCTTCCATTGTTGCATGATCTGGCCCAACAAATGAATTTGGCTGGTAATCAACAGCAGGTGTTTAGAATATACAGGGATACTCGTGCCTCAGTTTTAGAACAGAGTCTTAGGAAATTAGGTGTGGAGAGGCTTACCAAGGATGATGTCCAGAAAATGCAGTGGGAGGCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCGCATTGCTGTCAAACTGCTGTTTGCTGGGGAAAGGAAACTCTGTGATCAAATATTTGATGGTGCAGAGTCTCTCAAGGATCAATGCTTCGCTGATGTGACTACAAACAGTGTGTCAGTGCTACTAAGTTTTGGAGATGCAATTGCTAAAAGCAAGAGATCTCCAGAAAAATTATTTGTTCTTTTAGACATGTTTGAAATTATGCGAGAACTGCAATCTGAGATTGATACTCTTTTTGGAAGTAAACCATGCATTGAAATGCGGGATTCTGCATCGTGCTTGTCACAACGCCTTGCAGAAACAGCTCAAGAGACCTTTGTTGATTTTGAAGAAGCCGTAGAAAAAGATGCCACAAAAACCGCTGTTCTTGATGGGACTGTTCATCCCTTGACTAGTTATGTGATAAACTATGTCAAGTTTTTATTTGACTACCGATCCACTCTGAAGCAACTATTCCAAGATTTTGATGTTGGTGATCCAGATGCTCAGTTAGCAACGATAACTACAAGAATCATGCAGGCCCTTCAGACTAATCTTGATGGAAAATCCAAGCAATACAGGGATCCTGCATTAACTCAATTATTTCTGATGAACAATATTCACTATATAGTAAGATCTGTCCGAAGATCGGAGGCAAAGGATTTGTTGGGTGATGACTGGGTGCAGATACATAGAAGAATTGTGCAGCAGCATGCAAATCAATACAAGAGGATTTCTTGGGCAAAGATTTTGCAGTGCCTCACTGTTCAGGCCTCGGGTGGTAGCGGTGGTGCTTCGGGAGATGCTAGCAGTGGACTTTCAAGAGCTATGGTGAAAGATAGGTTGAAGACTTTTAACATCCAATTTGAAGAACTTCATCAACGGCAATCTCAATGGACAGTTCCTGACAGTGAGTTGCGGGAGTCGTTGAGGTTGGCAGTTGCTGAAGTCTTGTTGCCTGCCTACAGATCCTTCATCAAGCGTGGCATGCCTTTGGTTGATAATGGAAAAAATCCTCAAAAATACGTCAGATATACACCTGAGGATCTTGAGCGTATGCTAAATGAATTTTTCGAGGGCAAGACATTCGGTGAACAAAAGCGCTAG 1911 43.49 MGVPQTMEILSQRAVLVRESLQKSQTVTENMVSILGSFDYRLSALETAMRPTQIRTHSIRRAHENIEKTLKTAESMLAQFDLTRKAEAKILRGPHEDLESYLEAIDQLRSTNRFFTGNKNFKSSDTIIIHTTNLLAKAISKLEDEFRQLLTNYSKPVEPDRLFDCLPNSLRPSSASQQGDSGSKHDHANKSLEAAVFIPPTLIPPRVLPLLHDLAQQMNLAGNQQQVFRIYRDTRASVLEQSLRKLGVERLTKDDVQKMQWEALEAKIGNWIHYMRIAVKLLFAGERKLCDQIFDGAESLKDQCFADVTTNSVSVLLSFGDAIAKSKRSPEKLFVLLDMFEIMRELQSEIDTLFGSKPCIEMRDSASCLSQRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYRSTLKQLFQDFDVGDPDAQLATITTRIMQALQTNLDGKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQASGGSGGASGDASSGLSRAMVKDRLKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRGMPLVDNGKNPQKYVRYTPEDLERMLNEFFEGKTFGEQKR 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12901358 12911085 - MC01g0668 Mch1g0977 675869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0977 636 MobiDBLite consensus disorder prediction 166 186 - -
Mch1g0977 636 Pfam Exo70 exocyst complex subunit C-terminal 270 624 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Mch1g0977 636 Pfam Exocyst complex component Exo70 N-terminal 69 151 - -
Mch1g0977 636 Gene3D Exocyst complex component Exo70 75 636 - -
Mch1g0977 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 629 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch1g0977 636 SUPERFAMILY Cullin repeat-like 76 627 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g0977 Mch-Chr1:12901358 Mch9g1872 Mch-Chr9:20415757 0 dispersed
Mch1g0977 Mch-Chr1:12901358 Mch6g0064 Mch-Chr6:380659 1.05E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0977 K07195 - csv:105436019 1122.07