Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g0992 ATGGCAATAGACCAGGGTGAGCTTACCACTGAGCAGGTTCTTACAAGGGATATTCCATGGGAGACATACATGACCACAAAACTTATCAGTGGAACAAGCCTTCAGCTGTTAAGGCGTTATGATAACAGACAAGAGAGTTACAGGGCACAGTTGTTGGACGATGATGGTCCAGCATATGTACGAGTATTTGTTAGCATTCTACGTGATATATTTAAGGAAGAAACAGTGGAATATGTTCTAGCATTAATTGATGAAATGCTTACAGCAAACCCGAAAAGAGCAAGATTGTTCCATGATCACTCTCTTGCAAACGAAGATGCTTATGAGCCTTTCCTAAGATTGCTTTGGAAGGGCAATTGGTTTGTACAGGAGAAAAGCTGTAAAATACTTGCTCTGATTGTGAGTGCTAGAAAACAAAATCATGATGGCAGTTTTTCAAATGGTGATGCCTCAAACTCCAAGAGGCAAATTACTGCCATTGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCACAGTTGAAGAATCCTTCACATCCTAGTCGTGCCGTACAGACTTCTATCAATTGTCTTGCAACTCTGTTGAAGGAACCAAAGGTCAGATCCTCATTTGTCCAAGCAGATGGAGTGAAATTGCTTATTCCTTTGATTTCTCCTGCATCGACCCAACAATCTATTCAGCTTCTATATGAAACATGTCTTTGTGTTTGGCTCTTATCATATTATGAACCGGCAATTGAATTCTTGGCCACTTCTAGAACCCTTCCAAGACTTATCGAAGTTGTCAAGAGTTCCACAAAAGAGAAGGTTGTTCGAGTTGTTATTTTGACCTTGAGGAACTTACTCCACAAGGGGACATTTGGAGCTCAAATGGTGGGTCTCGGACTACCACAAATTGTTCAGAGTTTGAAATCACAAGCATGGAGTGATGAGGACCTTTTGGAGGCTTTGAATCAACTGGAAGAGGGGCTGAAAGATAATATCAAGAAACTAAGTTCTTTCGACAAGTATAAGCAAGAAGTCCTTCTCGGCCATCTTGACTGGTCTCCTATGCACAAAGATGTAAATTTCTGGCGTGAAAATATTACAAGCTTTGAAGAGAACGACTTCAAGATATTGAGGGTCCTAATCACCATCCTGGACACTTCAAGTGATCCAAGGGCTCTGGCAGTTGCCTGCTTTGATATTTCCCAGTTCATTCAACACCATCCGGCTGGGAGAGTTATAGTGACAGACCTCAAGGCCAAAGAAAGAGTGATGAAACTGATGAATCATGAGCATGCTGAGGTTACCAAGTATGCCCTCCTTTGCATCCAAAGGCTCTTCCTAGGTGCCAAGTATGCCAGTTTTCTGCAAGCTTAA 1365 41.9 MAIDQGELTTEQVLTRDIPWETYMTTKLISGTSLQLLRRYDNRQESYRAQLLDDDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDHSLANEDAYEPFLRLLWKGNWFVQEKSCKILALIVSARKQNHDGSFSNGDASNSKRQITAIDDVLDGLVKWLCAQLKNPSHPSRAVQTSINCLATLLKEPKVRSSFVQADGVKLLIPLISPASTQQSIQLLYETCLCVWLLSYYEPAIEFLATSRTLPRLIEVVKSSTKEKVVRVVILTLRNLLHKGTFGAQMVGLGLPQIVQSLKSQAWSDEDLLEALNQLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENDFKILRVLITILDTSSDPRALAVACFDISQFIQHHPAGRVIVTDLKAKERVMKLMNHEHAEVTKYALLCIQRLFLGAKYASFLQA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13013720 13023094 - MC01g0682 Mch1g0992 675884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g0992 454 CDD VATPase_H 4 448 - -
Mch1g0992 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 2 453 IPR004908 GO:0000221(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Mch1g0992 454 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 400 407 IPR018506 GO:0020037(InterPro)
Mch1g0992 454 Pfam V-ATPase subunit H 331 443 IPR011987 GO:0000221(InterPro)|GO:1902600(InterPro)
Mch1g0992 454 SUPERFAMILY ARM repeat 10 444 IPR016024 -
Mch1g0992 454 SMART arm_5 404 444 IPR000225 GO:0005515(InterPro)
Mch1g0992 454 SMART arm_5 243 284 IPR000225 GO:0005515(InterPro)
Mch1g0992 454 SMART arm_5 198 242 IPR000225 GO:0005515(InterPro)
Mch1g0992 454 Gene3D - 345 446 IPR038497 -
Mch1g0992 454 Gene3D - 7 333 IPR011989 -
Mch1g0992 454 FunFam V-type proton ATPase subunit H 345 446 - -
Mch1g0992 454 Pfam V-ATPase subunit H 9 325 IPR004908 GO:0000221(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Mch1g0992 454 PIRSF V-ATP_synth_H 4 453 IPR004908 GO:0000221(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g0992 K02144 - csv:101217015 849.351