Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1009 ATGTCCGAAAGCCCTAATCTCAGCGATGGTTTGCCAATTGGGCTTCCAAACGCAGATTTTGTCTCTAAGTTGCAGAGAGCCATGGCGACCATGAATTCCAGTGTTCTGGCCTGCAACTACGCCATTTCCGGAGCTGGATCGGCCGAGCTCAACTCGAAACTCAGCGCCGCGCCCTGCGTCGCATCGCCTGGGGTTGCTGGTTACAAGTTGCCTGCTATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGATGGAAGGAGAACTGCGCTTCTTTACCTCGGAGCCACTCTCTTTGCTGCGGCTGCGGCTGCCTCCAACTCCAATGCTAATGCAGGAGTCATTGAAGAGTATCTTGAAAAGAGTAAAGCTAACAAGGAACTGAATGACAAGAAAAGATTGGCAACTAGTGGAGCAAATTTTGCAAGGGCATACACTGTTGAGTTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAACAAAAGAAAGTTCCATTTATCTCTGATGATTTGGCTTTGGAGTGTGAGGGGAAGGACAAGTTCAAGTGTGGTTCCAATGTGTTCTGGAAATGGTGA 597 48.91 MSESPNLSDGLPIGLPNADFVSKLQRAMATMNSSVLACNYAISGAGSAELNSKLSAAPCVASPGVAGYKLPAIRAQQARVPEAKNDGRRTALLYLGATLFAAAAAASNSNANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKFKCGSNVFWKW 198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13118686 13120779 + MC01g0699 Mch1g1009 675901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1009 198 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 70 198 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)
Mch1g1009 198 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 28 198 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)|GO:0030093(PANTHER)
Mch1g1009 198 Gene3D - 114 198 IPR044907 -
Mch1g1009 198 FunFam Photosystem I reaction center subunit N 114 198 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1009 K02701 - csv:101204396 297.745