Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch1g1133 | TTCATCCTAATTTTCTTTATTTCTCTCAACTGGAACCCCCATGGGATCCCTTGGAATTGGCCGATTTTGGGAATGATTCCCACTATTTTCTCCAATCTCCACCGTATTCACGATCGTGTTACTGAAATCTTACACCAATCTTCTTCCACTTTCTTCTTCAAAGCCATTTGGTTTGCCAATATCGACTTCTTGCTCACTGCCGACCCTTCCAACATCCACCATATATTGAGCGCCAATTTCCAACGATACCCGAAAGGCCCCGATTTCAACTACATTTTTGACGTTTTGGGAGATGGGATTTTCAATGCCGACTCTGATTCATGGAAATACCAACGCAAGATTGCTCATTCCTTGGTTCATCGCGACGAGTTTCTTCGATTCTTGGAGAAAAACACGATGAAGAAGGTGAAGGAAGGGGTGGTTTCGGTGCTTGAAAGTGTTTGTGAAAATGGCTCGGTGTTGGATTTGCAAGATTTGTTTCAGAGATTCTCGTTTGATTCAACTTGTATGTTGGTCACTGGCTTCGACCTCAACAGTTTGTCTCTTGATTTCCCGCAAGTTCCTTTCTCCAAGGCCATGGATGACGTGGAGGAAATTATTTTTCTTCGCCACTTTTTTCCTAAAGCCTTGTGGGAGTTGCTAAACAAACTCCAAATTGGACAGCCCAGGAGGCAGAAACAAGCTCGCCAAATCATAGACCAAACCATCGCAGAATTGATAGCCTTGAAAAGAGAGAGCCTGCAAAAAGAAGAGGCAGCCCAAGGAGCTGATTTAATCACATCATATATGATAGACGAAGAATATCAAGATGGTAATTTTGAGAAAAATGAAAATTTTTTGAGAGACACTGTTTTGAATTTCATGATTGCCGGTCGGGACACTCTCAGCTCAGCTCTCTCTTGGTTTTTCTTCTGTCTCTCAAACAATCCAACAGTTGAAGCCAAGATAAGAGAGGAGCTCAAATCAATCATCCCAGAAAATGAAGATCATGATCAATGGAGGATATTTTCAATCGAAGAGTTGAACAAACTAGTTTACTTTCATGGGGCTTTATGTGAAACACTTAGACTTTATCCCCCAGTCCCATTTCAGCACAAAGTCCCTGTGGAAGCCGATGTTCTTCCATCGGGTAATAAAGTGGATCCTACAACTAAGATTCTGTTTTCGTTATATGCATTGGGGAGAATGAGTGAAGTGTGGGGCAAAGATTGTGAGGAGTTCAAGCCAGAGAGATGGATTTCAGAGAAAGGTAGTATAAAACATGTGCCATCTTACAAGTTCTTGGCATTTAATGCAGGGCCAAGGACTTGCTTGGGGAAACAAGTGGCTTTTACTGAGATCAAAATGGTTGCGGCTGCCATTATTCACAACTACAACATTATTCAAGAAATTGGTCATAAGGTTGTCCCAAATCCTTCCATTATTCTTCACATGAAGCATGGATTCAAGGTGAAGATTACAAAGAGA | 1467 | 41.65 | FILIFFISLNWNPHGIPWNWPILGMIPTIFSNLHRIHDRVTEILHQSSSTFFFKAIWFANIDFLLTADPSNIHHILSANFQRYPKGPDFNYIFDVLGDGIFNADSDSWKYQRKIAHSLVHRDEFLRFLEKNTMKKVKEGVVSVLESVCENGSVLDLQDLFQRFSFDSTCMLVTGFDLNSLSLDFPQVPFSKAMDDVEEIIFLRHFFPKALWELLNKLQIGQPRRQKQARQIIDQTIAELIALKRESLQKEEAAQGADLITSYMIDEEYQDGNFEKNENFLRDTVLNFMIAGRDTLSSALSWFFFCLSNNPTVEAKIREELKSIIPENEDHDQWRIFSIEELNKLVYFHGALCETLRLYPPVPFQHKVPVEADVLPSGNKVDPTTKILFSLYALGRMSEVWGKDCEEFKPERWISEKGSIKHVPSYKFLAFNAGPRTCLGKQVAFTEIKMVAAAIIHNYNIIQEIGHKVVPNPSIILHMKHGFKVKITKR | 489 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 13863798 | 13865264 | - | MC01g0792 | Mch1g1133 | 676025 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch1g1133 | 489 | CDD | CYP86A | 51 | 482 | - | - | |
| Mch1g1133 | 489 | PANTHER | CYTOCHROME P450 | 9 | 482 | - | - | |
| Mch1g1133 | 489 | SUPERFAMILY | Cytochrome P450 | 12 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1133 | 489 | Coils | Coil | 225 | 245 | - | - | |
| Mch1g1133 | 489 | Pfam | Cytochrome P450 | 17 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1133 | 489 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 430 | 439 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch1g1133 | 489 | PRINTS | E-class P450 group I signature | 279 | 296 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1133 | 489 | PRINTS | E-class P450 group I signature | 427 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1133 | 489 | PRINTS | E-class P450 group I signature | 437 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1133 | 489 | PRINTS | E-class P450 group I signature | 299 | 325 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1133 | 489 | Gene3D | Cytochrome P450 | 9 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1133 | 489 | PRINTS | P450 superfamily signature | 437 | 448 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1133 | 489 | PRINTS | P450 superfamily signature | 290 | 307 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1133 | 489 | PRINTS | P450 superfamily signature | 428 | 437 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1133 | 489 | PRINTS | P450 superfamily signature | 349 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch1g1133 | Mch-Chr1:13863798 | Mch1g1135 | Mch-Chr1:13880131 | 1.58E-294 | dispersed | |
| Mch1g1132 | Mch-Chr1:13850975 | Mch1g1133 | Mch-Chr1:13863798 | 5.01E-219 | tandem | |
| Mch1g1133 | Mch-Chr1:13863798 | Mch1g1134 | Mch-Chr1:13873881 | 7.10e-319 | tandem |
Pathway information