Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch1g1134 | TTGTTCAACTTCATACCCTTTCTTCTCATGATTTTCTTTCTAATTTTGAAGTGGAATTTCGATGGGTTTGTTCCTTGGAATTGGCCTCTTGTGGGGATGACGCCCACAGTGGCCTGCCATATCCACCGAGCTCACGATCGTATAACCGAAGTCTTGAACCAAACCGGCTGCAGCTTCCTTTTCAAAGGTATTTGGTTCACTGATCTCGACTTCTTGTTGACAGCCGACCCTTCAAATATTCACCACATTCTCAGTGCCAATTTCGAGCGATACCCAAAAGGCCCCGATTTCAAGTACATTTTTGACGTTTTGGGAGATGGGATTTTCAATTCCGACTCTGATTCGTGGAGGGAGCAGCGCAGAATCGCTCATTCATTGGTTCGCCATGACAAGTTTCTCCAATTCCTGGAGGAAACCACGATGAAGAAGGTAAAGGAAGGGGTGGTTTTGGTGCTTGAAAGTGTCTGTGAAGATGGATCGGTGTTGGATTTGCAAGATTTGTTTCAGAGATTCTCGTTTGATTCAACTTGTATGTTGGTCACTGGCTTCGACTTCAACAGTTTATCTATTGATTTCCCTCAAGTTCCTTTCTCCAAGGCCATGGATGACGTGGAGGAAGTGATTCTTCTTCGCCATTTCATCCCTAAAAGTTTGTGGGAATTGCAAAAGAAACTCCAAATTGGACAACCCAAGAAGCTGAAAGAAGCTTGGGAAATCATAGATCAAACCATCGCCAAATTGATAGCCTTGAAAAGAGAGAGCTTGCAAAAAGAAGAGCCAGCCCAAGGAGCTGATTTAATCACATCTTATATGGTAAACGAAGAAGATGGTTTTGAGAAAAATGAAAATTTTTTGAGAGACACTGTTTTAAATTTCATGATTGCCGGTCGGGACACTCTCAGCTCAGCTCTCTCTTGGTTTTTCTTCTGTCTCTCAAACAATCCAACAGTTGAAGCAAAGATAAGAGAGGAGCTCAAATCAATCATCCCAGAAAATGAAGATCATGATCAATGGAGGATATTTTCAATCGAAGAGTTGAACAAACTAGTTTACTTTCATGGGGCTTTATGTGAAACACTTAGACTTTATCCTCCAGTCCCATTTCAGCACAAAGTCACTGTGGAAGCCGATGTTCTTCCATCGGGTCATAAAGTGGATCCTACAACTAAGATTCTGTTTTCGTTATATGCATTGGGGAGAATGAGTGAAGTGTGGGGCAAAGATTGTGAGGAGTTCAAGCCAGAGAGATGGATTTCAGAGAAAGGGAGTATAAAACATGTGCCATCTTACAAGTTCTTGGCATTTAATGCAGGGCCAAGGACTTGCTTGGGGAAACAAGTGGCTTTTACTGAGATCAAAATGGTTGCGGCTGCCATTATTCACAACTACAACATTATTCAAGAAATTGGTCATAAGGTTGTCCCAAATCCTTCCATTATTCTTCACATGAAGCATGGATTCAAAGTGAAGATCACAAAGAGA | 1482 | 41.84 | LFNFIPFLLMIFFLILKWNFDGFVPWNWPLVGMTPTVACHIHRAHDRITEVLNQTGCSFLFKGIWFTDLDFLLTADPSNIHHILSANFERYPKGPDFKYIFDVLGDGIFNSDSDSWREQRRIAHSLVRHDKFLQFLEETTMKKVKEGVVLVLESVCEDGSVLDLQDLFQRFSFDSTCMLVTGFDFNSLSIDFPQVPFSKAMDDVEEVILLRHFIPKSLWELQKKLQIGQPKKLKEAWEIIDQTIAKLIALKRESLQKEEPAQGADLITSYMVNEEDGFEKNENFLRDTVLNFMIAGRDTLSSALSWFFFCLSNNPTVEAKIREELKSIIPENEDHDQWRIFSIEELNKLVYFHGALCETLRLYPPVPFQHKVTVEADVLPSGHKVDPTTKILFSLYALGRMSEVWGKDCEEFKPERWISEKGSIKHVPSYKFLAFNAGPRTCLGKQVAFTEIKMVAAAIIHNYNIIQEIGHKVVPNPSIILHMKHGFKVKITKR | 494 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 13873881 | 13875362 | + | MC01g0793 | Mch1g1134 | 676026 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch1g1134 | 494 | CDD | CYP86A | 59 | 487 | - | - | |
| Mch1g1134 | 494 | SUPERFAMILY | Cytochrome P450 | 25 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1134 | 494 | PRINTS | E-class P450 group I signature | 304 | 330 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1134 | 494 | PRINTS | E-class P450 group I signature | 432 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1134 | 494 | PRINTS | E-class P450 group I signature | 284 | 301 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1134 | 494 | PRINTS | E-class P450 group I signature | 442 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1134 | 494 | PRINTS | P450 superfamily signature | 295 | 312 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1134 | 494 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1134 | 494 | PRINTS | P450 superfamily signature | 442 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1134 | 494 | PRINTS | P450 superfamily signature | 433 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1134 | 494 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 435 | 444 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch1g1134 | 494 | Gene3D | Cytochrome P450 | 23 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1134 | 494 | PANTHER | CYTOCHROME P450 | 15 | 487 | - | - | |
| Mch1g1134 | 494 | Pfam | Cytochrome P450 | 27 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch1g1132 | Mch-Chr1:13850975 | Mch1g1134 | Mch-Chr1:13873881 | 6.53E-216 | dispersed | |
| Mch1g1134 | Mch-Chr1:13873881 | Mch9g0600 | Mch-Chr9:4444344 | 3.59E-120 | dispersed | |
| Mch1g1133 | Mch-Chr1:13863798 | Mch1g1134 | Mch-Chr1:13873881 | 7.10e-319 | tandem | |
| Mch1g1134 | Mch-Chr1:13873881 | Mch1g1135 | Mch-Chr1:13880131 | 2.28e-316 | tandem |
Pathway information