Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1165 ATGACTTTGCACCAAAAGTGTTTGATCGTTATTATCGCAATTTTCTCGGCTTCTTCAACTATCGCTGAGAACTTGACGTCCTGCAGAACCGGGGATTCGGCTAAATTTGTACGGTATGCGTTTGGATTCTCAGAATCGAGCCCAATCAGATTGAGTTGCAGCGAAAATGGTGAGATTCAAATCGGTGGATTCCAGGTCCAGAACATTACTGAGAGGAGCATCCTCGTCAAACTTCCTGCAGTGTGCAATTTCTCTGTATCAGTTTCAGAACTGTTCGGCGGAAATTATTGGCCCACTAATCGCAACAGTCTCCTCTTGAATTGTACTCAACAACGTATTCCATGCGCAATATTAGCAAATTTTAGCCAGATTCTGCCAGAGAACTGCGGCATTAGACGCAGTAATCCCAGCTGCTTCACCAAGACCAACGAAACTGGATTCCTGCCCCGTTTAGAAGATAAGTGCCAGTTCCTCTGGTCCTCTGCATTCGTTGATTCCACGTCAAATCAGACCGCTTCTCTCCAATTCCAGGTCATTGAGTTAGAGTGGTGGCTCTCAGTGGCCTCCAATGATTCCGCAAAATGCTCGAAAAATGCCGATCCTGAGTTTATCAACGCCCCACGGAACCACCAAGGATTCCGTTGCCGGTGCAAAGAAGGGTTTGAAGGAAATGGATACGACGGCGTCGGTTGCCGGAAAGTTTCTCGCGAGTGCAATCCTTCAAGGTTCGTGTCTGGCCAATGTGGCGGAAGCAACAGAGTCACTGCTCTAATTGCAGGCATTGTTATTGGAGCCGTTCTAATGGCTGTCCTGACGCTTATCTGTTACTGCATCCGACGCCGCTCGATGTGTCTGAAAGGTCAGACAAGCGCTAAGCGGCTTCTATCTGAGGCCGCTGGAAATTCCAGTGTTACTTTATATCCCTACAAAGAAATAGAAAAAGCCACTAGTGGCTTCTCTGAGAAACAAAGGCTGGGAACTGGAGCCTTTGGTACAGTTTATGCAGGACGGCTTCATGAAGATGAATGGGTTGCTGTAAAAAGGATCAAATATAGAGACCACAATAGCATTGATCAGGTCATGAATGAGATTAAACTACTCTCCTCTGTGAGCCACCCGAATCTAGTCCGCTTGCTAGGCTGCTGCATTGAGGAAGGCCAACAGATTCTTGTCTATGAGTTTATGCCCAATGGAACTCTCTCTCAACATCTCCAGAGAGAGCGTGGAAATGGCCTTCCATGGACGACTCGGCTCACCATTGCAGCTGAAACTTCTCGTGCGATAGCATACCTCCATTCTTCTGTGCATCCACCGATATATCACAGAGACATCAAATCAAGCAATATACTTTTGGATCATAACTTCAAATCAAAAGTTGCAGATTTTGGTCTTTCTAGACTTGGTATGACAGAAATATCACACATCTCAACAGCTCCACAAGGGACCCCGGGCTATGTTGATCCGCAATACCACCAAAATTTCTATCTTTCAGATAAAAGTGATGTTTATAGTTTCGGAGTAGTCCTAGTAGAGATAATAACAGCATTAAAAGTGGTTGATTTCACTCGTCCCCAGAGTGAAGTAAACTTAGCTGCACTTGCCATTGATAGGATTGGGAGAGGTTGTATAGATGAACTAATTGATCCTTTCCTAGACCTGCATAGAGATGCTTGGACTCTTTACTCCGTTCACAAGGTGGCTGAGCTTGCATTCAGATGCCTTGCTTTTCATAGTGACATGAGGCCTTCGATGATGGAAGTGGCAGAGGAACTGGAAAACATCAGACGCAGCGGGTGGACATCGATGGAGGAGCATTTTTGTGCAGCATCATCAGCAGGGTCAGCTTGCTCATCTCCACGTAGCGTAAGCGAGAGATCCATAAGTGGGATAACAATTAAAAAGGCCGGGCTGCTTGCAGGACTGGGGAGCCAGAGATTGATAATCCCACCGGAGAATAATCACCACAAGGACTGTCTGCCTCCTGTAGAGGAGGTTATGGATAGTTCCCCAGTTTCCATACAGGATCCTTGGTTGAGTGAACAAAGCTCACCTTCAACAAATAGTTTATTGGGCAATGTGGTACAGTGA 2088 46.12 MTLHQKCLIVIIAIFSASSTIAENLTSCRTGDSAKFVRYAFGFSESSPIRLSCSENGEIQIGGFQVQNITERSILVKLPAVCNFSVSVSELFGGNYWPTNRNSLLLNCTQQRIPCAILANFSQILPENCGIRRSNPSCFTKTNETGFLPRLEDKCQFLWSSAFVDSTSNQTASLQFQVIELEWWLSVASNDSAKCSKNADPEFINAPRNHQGFRCRCKEGFEGNGYDGVGCRKVSRECNPSRFVSGQCGGSNRVTALIAGIVIGAVLMAVLTLICYCIRRRSMCLKGQTSAKRLLSEAAGNSSVTLYPYKEIEKATSGFSEKQRLGTGAFGTVYAGRLHEDEWVAVKRIKYRDHNSIDQVMNEIKLLSSVSHPNLVRLLGCCIEEGQQILVYEFMPNGTLSQHLQRERGNGLPWTTRLTIAAETSRAIAYLHSSVHPPIYHRDIKSSNILLDHNFKSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNFYLSDKSDVYSFGVVLVEIITALKVVDFTRPQSEVNLAALAIDRIGRGCIDELIDPFLDLHRDAWTLYSVHKVAELAFRCLAFHSDMRPSMMEVAEELENIRRSGWTSMEEHFCAASSAGSACSSPRSVSERSISGITIKKAGLLAGLGSQRLIIPPENNHHKDCLPPVEEVMDSSPVSIQDPWLSEQSSPSTNSLLGNVVQ 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14092234 14097580 - MC01g0823 Mch1g1165 676057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1165 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1165 695 FunFam Wall-associated receptor kinase-like 20 395 604 - -
Mch1g1165 695 Gene3D Phosphorylase Kinase; domain 1 279 394 - -
Mch1g1165 695 FunFam Wall-associated receptor kinase-like 14 286 394 - -
Mch1g1165 695 ProSiteProfiles Protein kinase domain profile. 319 594 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1165 695 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 36 681 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Mch1g1165 695 SUPERFAMILY Protein kinase-like (PK-like) 297 592 IPR011009 -
Mch1g1165 695 SMART serkin_6 319 600 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1165 695 MobiDBLite consensus disorder prediction 672 695 - -
Mch1g1165 695 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524(InterPro)
Mch1g1165 695 Pfam Protein kinase domain 320 589 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1165 695 MobiDBLite consensus disorder prediction 670 695 - -
Mch1g1165 695 Gene3D Transferase(Phosphotransferase) domain 1 395 611 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1165 Mch-Chr1:14092234 Mch8g1280 Mch-Chr8:9295705 3.14E-88 dispersed
Mch11g1350 Mch-Chr11:9638304 Mch1g1165 Mch-Chr1:14092234 2.39E-74 transposed
Mch5g0899 Mch-Chr5:6622573 Mch1g1165 Mch-Chr1:14092234 7.59E-48 transposed
Mch9g2182 Mch-Chr9:22441647 Mch1g1165 Mch-Chr1:14092234 7.26E-46 transposed
Mch1g1165 Mch-Chr1:14092234 Mch8g0737 Mch-Chr8:5214703 1.57E-190 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77125 PF07714 PK_Tyr_Ser-Thr 4.20E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1165 - - - 0.0