Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1198 ATGAAGGATAACTCCTCAAAAGTTGTTGTTTTGTTCCTTATAAGCTTCTTTTTTTTGAATCAGCTCCTTGTGTCCTCGCAACTTGATTATAGGTTCTATGATGACTCTTGTCCCAACCTAACAAGGATTGTCAGATATGGCGTCTGGATGGCCCTTTCTAATGATACTAGGATGGCTGCCTCTCTCCTACGGCTTCATTTTCATGATTGCTTTGTCAACGGTTGTGATGGATCAGTGTTGCTTGATGACACTAGCACATTCAAGGGGGAGAAAAATGCGCTCCCGAACATGAACTCTATTCGAGGTTTTGAGGTCATTGATAATATAAAGGCTGTTTTAGAGAGAGTCTGCCCATCCGTCGTTTCATGCACCGATATACTAACTCTAGCAGCAAGAGAGGCTGTCTACTTTGCTGGAGGATCATATTGGCCTATTCCACTTGGTCGCCGAGATGGCACAACAGCGAGCGAGAGTGAAGCCAATCAGCTGCCATCACCATTGGAGCCATTGGAGAATATCATTGCAAAATTCACTTCAAAAGGTCTTAATGTAAAGGATGTTGTTGTGCTCTCAGGTGCACACACTTTCGGATTTGCTCGGTGCATGATGTTCAAACACAGGCTCTTCAACTTCAACAACTCTGGAAATCCTGATCCAGAACTCAGCACATCGCTGCGACAGAACTTACAGAGCATGTGTCCTAATCAAGATGACTCCAACAACAAACTGGCTCCCTTGGACGCCTACACGACCAACAAGTTCGACAATGTGTATTACAGGAACCTGGTGAACAAGTTGGGACTTCTGCAGTCGGACCAAGCTCTCATGCAAGACAATACAACTGCTCCTTTTGTGGTAGACTACAGCAGGTACCCATATCTGTTTTACAGGGACTTTGGAGCATCAATGGTGAAGCTGGCCAATATTGGGATCCTCACTGGCCAGAATGGGGAGATTAGGAAGAACTGCAGGGTGGTGAACTAG 984 45.33 MKDNSSKVVVLFLISFFFLNQLLVSSQLDYRFYDDSCPNLTRIVRYGVWMALSNDTRMAASLLRLHFHDCFVNGCDGSVLLDDTSTFKGEKNALPNMNSIRGFEVIDNIKAVLERVCPSVVSCTDILTLAAREAVYFAGGSYWPIPLGRRDGTTASESEANQLPSPLEPLENIIAKFTSKGLNVKDVVVLSGAHTFGFARCMMFKHRLFNFNNSGNPDPELSTSLRQNLQSMCPNQDDSNNKLAPLDAYTTNKFDNVYYRNLVNKLGLLQSDQALMQDNTTAPFVVDYSRYPYLFYRDFGASMVKLANIGILTGQNGEIRKNCRVVN 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14343414 14346705 + MC01g0853 Mch1g1198 676090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1198 327 Gene3D Peroxidase, domain 2 164 306 - -
Mch1g1198 327 Pfam Peroxidase 45 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Mch1g1198 327 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 FunFam Peroxidase 31 177 - -
Mch1g1198 327 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 Gene3D - 31 327 - -
Mch1g1198 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Mch1g1198 327 FunFam Peroxidase 164 306 - -
Mch1g1198 327 PANTHER PEROXIDASE 72-RELATED 16 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Mch1g1198 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1198 Mch-Chr1:14343414 Mch4g2473 Mch-Chr4:25560499 1.50E-104 dispersed
Mch4g0031 Mch-Chr4:218781 Mch1g1198 Mch-Chr1:14343414 1.94E-71 transposed
Mch7g0120 Mch-Chr7:1499394 Mch1g1198 Mch-Chr1:14343414 4.08E-61 transposed
Mch1g1198 Mch-Chr1:14343414 Mch2g0767 Mch-Chr2:5292842 2.60E-89 wgd
Mch1g1198 Mch-Chr1:14343414 Mch2g1164 Mch-Chr2:7960301 2.83E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1198 K00430 - csv:101218459 585.874