Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1222 AACATCATGACAACGAGTGCAGATGAAGGACAGCTTCTGAGCATGCTTCTCAAACTCATCAACGCCAAGAACACCATGGAGATTGGCGTCTTCACTGGCTACTCCCTGCTCGCCACTGCCCTCGCTCTTCCCCACGATGCCAAGATATTGGCTATGGATATCAATCGGGAGAATTACGAGTTGGGTCTTCCCATAATTCAAAAGGCTGGTGTTGCACACAAGATAGATTTCAGAGAAGGCCCTGCCCTGCCCCTCCTCGACCAAATGATCCAACAAGGGACATACCATGGGACGTTTGATTTTATCTTTGTGGATGCTGATAAGGACAATTACTTGAATTACCACAAGAAGCTTATTGATCTTGTGAAGATTGGTGGTGTGATCGGCTACGACAACACTCTGTGGGCTGGCTCTGTGGTGGCGCCGCCGGATGCCCCTCTTAGAAACTACATTAGGTATTATAGGGATTTTGTTTTGGAGATCAACAAAGCCTTGGCTGTTGATCCTAGGATTGAGGTCTGCCAACTCGCAGTGGGAGATGGAATCACTTTCTGTCGCCGTATCACC 567 48.32 NIMTTSADEGQLLSMLLKLINAKNTMEIGVFTGYSLLATALALPHDAKILAMDINRENYELGLPIIQKAGVAHKIDFREGPALPLLDQMIQQGTYHGTFDFIFVDADKDNYLNYHKKLIDLVKIGGVIGYDNTLWAGSVVAPPDAPLRNYIRYYRDFVLEINKALAVDPRIEVCQLAVGDGITFCRRIT 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14558218 14558951 + MC01g0875 Mch1g1222 676114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1222 189 Gene3D Vaccinia Virus protein VP39 1 189 IPR029063 -
Mch1g1222 189 CDD AdoMet_MTases 30 128 - -
Mch1g1222 189 Pfam O-methyltransferase 1 188 IPR002935 GO:0008171(InterPro)
Mch1g1222 189 PANTHER O-METHYLTRANSFERASE-RELATED 1 188 IPR050362 GO:0008757(PANTHER)
Mch1g1222 189 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 187 IPR029063 -
Mch1g1222 189 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 188 IPR002935 GO:0008171(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1222 Mch-Chr1:14558218 Mch9g2362 Mch-Chr9:23564272 1.48E-64 dispersed
Mch1g1222 Mch-Chr1:14558218 Mch10g0488 Mch-Chr10:3168606 2.58E-115 wgd
Mch1g1222 Mch-Chr1:14558218 Mch4g0692 Mch-Chr4:4641050 2.36E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1222 K00588 - vvi:100243978 346.28