Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch1g1246 | ATGAACGAATTAACTCCAAATCGGGTGTCTGCACTTTGGTCCTCCTCAAGCTGCAGAATCAGAAATCAATACGCCATGGAACAGAGCTTCCTACTTTATGCTTCCCTCTCTCTTCTCTTCCTTGCTTTTTCTTTCAAGCTCATCCGAAGATCGGCCGGCGCTCGGAAAAACTTACCGCCGGCTCCGCCCTCTCTTCCGGTCATCGGCCACCTCCATCTCTTGAAAAAGCCACTCTACAGAAATTTCCAGAAGATTTCCGCCAAATATGGTCCTGTTATGTCTCTCCGCCTCGGCTCTCGCCTCGCGGTGGTGGTATCGTCTTCCTCCGCGGTGGAGGAGTGCTTCACCAAAAACGACGTCGTCCTCGCCAACCGTCCTCGCTTGCTAATTGCCAAACACCTTGCCTACAACTTCACCACCATGATTGCGGCTCCGTACGGCGACCACTGGCGGAACCTCCGCCGCATCGGCGCCATCGAAGTCTTCTCTTCGTCTCGCCTCAACAAATTCGCCGATATCCGGAGGGATGAAGTGGAGCGACTGCTGCGGAAACTCTCGCGGAATTCCATCCGTGGATTCTCGAAAGTAGAAATGCAATCGGCGTTTTCGGAACTGACGTTCAACATCTCGATGAGAATGGCGGCGGGGAAGAGGTATTACGGAGACGACGTGACGGACGAGGAAGAGGCGAGGAAGTTCAGGAAGATAGTTAAGCAGCTTGTGGCGATGGGAGGAGTATCGAATCCAGCGGATTTCGTTCCGATTCTGAATTGGATTCCCAACGGTTTCGAGAGGAAATTGATTGAGCTTGGGGAGAAGATAGACACGTTCTTGCAGGGGCTAATCGACGAACACCGGAGAAAGAAGGAAGAGGGAACTGGAAGGAACACCATGATCGATCATCTGCTCTCGCTGCAAGAATCCGATCCTGCGCTCTACGAGGACCAAATAATCAAGGGATTTATACTGGTGTTACTAACGGCGGGGACCGATACATCGGCGGTGACAATGGAATGGGCCCTGTCTCATCTACTGAACAATCCTCAAGTGCTAAAGAAGGCAAGAGAAGAACTAGACACTCAGATTGGAGAAGAGCGACTAGTGGAAGAATCAGACGTTGCTAAATTGCCCTATCTTCAAGGGATCATCTCCGAGACTCTGCGGCTGAATCCGGCGGCTCCGATGTTGGTGCCACATTTCGCGTCCGACGACTGCAAGATATGTGGATACGACGTGCCACGTGGCACAATAGTCATGGTCAACGCGTGGGCCATACACAGAGATCCGAACGAATGGGAGGAGGCCACGTGTTTCAAACCAGAACGTTACGAGAAGTCCGAAGAGGATGTGCACAGGCTGGTGCCGTTCGGGGTTGGGCGGCGGGCTTGTCCCGGGTCCGGCATGGCGCAGAGGGTGATGGGCCTCACTTTGGCGGCGCTGATTCAGTGCTTCGAGTGGGAGAGAGTTGGAGAAGAAGAAGTGGACATGAACGAAGGGATGGGCGCCACAATGCCCAAGATCGTGCCGTTGGAGGCCATGCGAACATTTAATTTAACATGGCCGTTCAACGGTGGACTTGTTCATCTCCTCTCCTCTCTTCTCTGCGATCCTCTCGTCTTCAATGGCAACTCAAAAGTAAACCCATTTGATCGGAACCCACCATTCATGGAAACCCTTTTCTCTCGCGCTCTCCTCTGTCTCCTCCTCTTCTCTGTTCACGTCCTGTCTCAGTCTTATACTTCCCCGGTGAAGTATTTTGTCAACTGTGGATCGCGGGCCACCGTCGTCGAGAACGCCAACCAGAATTTCATCGGCGACTTTAATTCCGATGGTACTTTCAGGTTCTCGTCGGGGGATCCCTCTGATCTCGACAATTCGCCTCCATCTCTGAACGGCTCCGCCAGGATTTTCAAGCAGGCTTCGTTTTACGAATTTCAAATCGAAGAAGATGCTGTTCATATTGTACGCCTTCATATCTCTCCTTTCAATTTTTCTTCCGACTTACCCACAGTCCATTTCGATGTTTCGGCTCTTGGGGTTTTTCTTCTGAAAGATGTCACGGCCACCAGCGTCGCCAACGACTCTGCTTCAATTAATGAATTCTTCCTGAGCATAAACAGAGGGAAATTTCGGATTAATTTTTTGCCGAAACCTTCATCTATTGCGTTTGTGAATGCCATTGAAGTGTTCCCCACCCCACCGAGCTTCTTCCTGCCCAATATTGCTCCGGTGATTAACCCCGCCGGCGAAAAAGGTGTAAAATGGGATTTGGACGACGCTTATCTGGTGAATCCGAGCTCTGCAAAGGACAGCACTGTTTATCCGTCGACACCCAATTACCAGAACGAAGATGACAAATATTTTGCGCCCGATTGGGTCTACAGAACGGCCACGGAGATGAATATAAATTCCAGCGTCACCCAAAAGTTCTTCAACATCACGTGGTCTTTTCATTCCAGAAAACATACACGCCATTTTCTCCGGGTTCATTTCTTTGATGTCGTCGGTTTAGCCTCTAATAATTTTCTAGTCTTCGATTTGTTTATTGGCGATAGATTCAAGAATGACCCTCCTATAGGTTCAGATTCGACGAGCACGAACTTCCCAAATCATTTTGATTTCTTGGTGGATTCTGGTGATAGTGAATTTGTTAATGTCAGTGTTGGTCCTCTGCCTTTTAACCAATCTGCACAGTTCAACGCTTTTCTGAATGGGGCTGAGATTATGGAAGCCATGGATGAGCCTAGCCACGATCCTCCCATCAGAGATCCTGAGGAAAAGAAGAACAAACATTTGGGTCTTTTCGTGGGTTTGGGTGTTGGGGCTTTTGCGTTGGTCTGCATTTTAGGCTGTGGAATCTGGTTTTGTGTGGAACGAAGGAAGCCAAAAACTGAGGAAGGTTCACATACACCCTCGAATTGGTCTCCATTATCTGGTTTTGGAGGGAGTACTCTCAGCAGGTTTACTGAGAGAACCACAAGCAGCTCCCCCATTCCTAACTTGAATCTTGGCCTCAAGTTTTCGCTTGCCGAAATCAAAACCGCCACAAACAATTTCAACAGGAAGTTCCTCGTTGGTGAGGGCGGTTTTGGTAAAGTCTACAAGGGAATTCTTAGAAACGGCATGAAAGTAGCTGTGAAGCGAAGCCAGCCCGGAGCTGGACAAGGCATTTCCGAGTTCGAGAGAGAGATCACGATCTTGTCCCGCATTCGCCACCGGCATCTCGTTTCGTTCATCGGGTATTGCGACGAAGGATTGGAAATGATTCTGGTTTATGAATTCATGGAGAATGGCACCTTGAGAGAACATCTCTACAACTCAAAGTTGCCTCCTCTGCCTTGGAAGAAAAGGCTTGAAATCTGCATTGGCGCAGCCAGAGGCCTTAATTACCTTCACAAAGGCTCAGCCGGGGGAATCATTCACCGCGATGTCAAGTCCACCAACATCTTGCTCGACGAGAACCTGGTTGCTAAAGTTTCCGACTTTGGCCTCTCAAGAGCAGGCCCTCTCGATGAAACTCACGTCAGCACAGACATTAAAGGGACATTCGGGCCAGCTCTGAATCCAGCGCTGCCAAGAGAGCAAATAAATCTAGCAGAGTGGGGATTGAGGTGCAAGAAAATGGAGCTGCTGGAGGAGATAATTGACCCCAAATTGGAGGGTCAGATAAATCCCAACTCGTTGAGAAAGCTAAGCGAGACAGTAGAGAAATGCTTGCAAGATGATGCTGCGGACAGGCCTGCAATGGCGGATGTGTTGTGGGACTTGGAATACGCATTGCAGCTTCAGCAAAGTGCACACCCGAGAATGCCTCATGAGGACAGTGTAACCAATGCCAACGCCTCGTCCACCGCGATTCAACGGTTTCCTTCGATGGGTTCTTCGATTCTGAGGGATGATACAACAAATATGATGATGAGTCAAGATCTGGACACTCACTTGACTGCCAGT | 3951 | 49.66 | MNELTPNRVSALWSSSSCRIRNQYAMEQSFLLYASLSLLFLAFSFKLIRRSAGARKNLPPAPPSLPVIGHLHLLKKPLYRNFQKISAKYGPVMSLRLGSRLAVVVSSSSAVEECFTKNDVVLANRPRLLIAKHLAYNFTTMIAAPYGDHWRNLRRIGAIEVFSSSRLNKFADIRRDEVERLLRKLSRNSIRGFSKVEMQSAFSELTFNISMRMAAGKRYYGDDVTDEEEARKFRKIVKQLVAMGGVSNPADFVPILNWIPNGFERKLIELGEKIDTFLQGLIDEHRRKKEEGTGRNTMIDHLLSLQESDPALYEDQIIKGFILVLLTAGTDTSAVTMEWALSHLLNNPQVLKKAREELDTQIGEERLVEESDVAKLPYLQGIISETLRLNPAAPMLVPHFASDDCKICGYDVPRGTIVMVNAWAIHRDPNEWEEATCFKPERYEKSEEDVHRLVPFGVGRRACPGSGMAQRVMGLTLAALIQCFEWERVGEEEVDMNEGMGATMPKIVPLEAMRTFNLTWPFNGGLVHLLSSLLCDPLVFNGNSKVNPFDRNPPFMETLFSRALLCLLLFSVHVLSQSYTSPVKYFVNCGSRATVVENANQNFIGDFNSDGTFRFSSGDPSDLDNSPPSLNGSARIFKQASFYEFQIEEDAVHIVRLHISPFNFSSDLPTVHFDVSALGVFLLKDVTATSVANDSASINEFFLSINRGKFRINFLPKPSSIAFVNAIEVFPTPPSFFLPNIAPVINPAGEKGVKWDLDDAYLVNPSSAKDSTVYPSTPNYQNEDDKYFAPDWVYRTATEMNINSSVTQKFFNITWSFHSRKHTRHFLRVHFFDVVGLASNNFLVFDLFIGDRFKNDPPIGSDSTSTNFPNHFDFLVDSGDSEFVNVSVGPLPFNQSAQFNAFLNGAEIMEAMDEPSHDPPIRDPEEKKNKHLGLFVGLGVGAFALVCILGCGIWFCVERRKPKTEEGSHTPSNWSPLSGFGGSTLSRFTERTTSSSPIPNLNLGLKFSLAEIKTATNNFNRKFLVGEGGFGKVYKGILRNGMKVAVKRSQPGAGQGISEFEREITILSRIRHRHLVSFIGYCDEGLEMILVYEFMENGTLREHLYNSKLPPLPWKKRLEICIGAARGLNYLHKGSAGGIIHRDVKSTNILLDENLVAKVSDFGLSRAGPLDETHVSTDIKGTFGPALNPALPREQINLAEWGLRCKKMELLEEIIDPKLEGQINPNSLRKLSETVEKCLQDDAADRPAMADVLWDLEYALQLQQSAHPRMPHEDSVTNANASSTAIQRFPSMGSSILRDDTTNMMMSQDLDTHLTAS | 1317 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 14737877 | 14755601 | - | MC01g0893 | Mch1g1246 | 676138 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch1g1246 | 1317 | PRINTS | E-class P450 group I signature | 317 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | PRINTS | E-class P450 group I signature | 86 | 105 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | PRINTS | E-class P450 group I signature | 337 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | PRINTS | E-class P450 group I signature | 380 | 398 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | PRINTS | E-class P450 group I signature | 110 | 131 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | PRINTS | E-class P450 group I signature | 421 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | PRINTS | E-class P450 group I signature | 463 | 486 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | PRINTS | E-class P450 group I signature | 205 | 223 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | PRINTS | E-class P450 group I signature | 453 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1095 | 1184 | - | - | |
| Mch1g1246 | 1317 | ProSiteProfiles | Protein kinase domain profile. | 1019 | 1270 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mch1g1246 | 1317 | PANTHER | CYTOCHROME P450 82C3-RELATED | 39 | 515 | IPR050651 | - | |
| Mch1g1246 | 1317 | FunFam | receptor-like protein kinase FERONIA | 984 | 1094 | - | - | |
| Mch1g1246 | 1317 | SMART | serkin_6 | 1019 | 1259 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Mch1g1246 | 1317 | SUPERFAMILY | Cytochrome P450 | 59 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1185 | 1263 | - | - | |
| Mch1g1246 | 1317 | Gene3D | - | 580 | 732 | - | - | |
| Mch1g1246 | 1317 | Gene3D | - | 744 | 912 | - | - | |
| Mch1g1246 | 1317 | Pfam | Cytochrome P450 | 59 | 505 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | PRINTS | P450 superfamily signature | 454 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | Pfam | Malectin-like domain | 587 | 910 | IPR024788 | - | |
| Mch1g1246 | 1317 | FunFam | Cytochrome P450 family protein | 50 | 518 | - | - | |
| Mch1g1246 | 1317 | Gene3D | Phosphorylase Kinase; domain 1 | 983 | 1094 | - | - | |
| Mch1g1246 | 1317 | CDD | CYP81 | 90 | 510 | - | - | |
| Mch1g1246 | 1317 | ProSitePatterns | Protein kinases ATP-binding region signature. | 1025 | 1047 | IPR017441 | GO:0005524(InterPro) | |
| Mch1g1246 | 1317 | SUPERFAMILY | Protein kinase-like (PK-like) | 1005 | 1255 | IPR011009 | - | |
| Mch1g1246 | 1317 | FunFam | Os07g0541700 protein | 1095 | 1182 | - | - | |
| Mch1g1246 | 1317 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1139 | 1151 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Mch1g1246 | 1317 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 456 | 465 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch1g1246 | 1317 | Gene3D | Cytochrome P450 | 44 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch1g1246 | 1317 | Pfam | Protein tyrosine and serine/threonine kinase | 1025 | 1173 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Mch1g1246 | 1317 | Coils | Coil | 168 | 188 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0826 | Mch-Chr11:5574183 | Mch1g1246 | Mch-Chr1:14737877 | 1.05E-153 | dispersed | |
| Mch1g1246 | Mch-Chr1:14737877 | Mch2g1289 | Mch-Chr2:9026838 | 3.58E-181 | dispersed | |
| Mch1g1689 | Mch-Chr1:17620343 | Mch1g1246 | Mch-Chr1:14737877 | 5.41E-81 | dispersed | |
| Mch2g1279 | Mch-Chr2:8916660 | Mch1g1246 | Mch-Chr1:14737877 | 2.27E-16 | dispersed | |
| Mch9g1610 | Mch-Chr9:18293041 | Mch1g1246 | Mch-Chr1:14737877 | 1.06E-70 | dispersed | |
| Mch1g1245 | Mch-Chr1:14733949 | Mch1g1246 | Mch-Chr1:14737877 | 1.14E-273 | tandem | |
| Mch5g1309 | Mch-Chr5:13961575 | Mch1g1246 | Mch-Chr1:14737877 | 2.12E-90 | transposed | |
| Mch1g1246 | Mch-Chr1:14737877 | Mch11g0338 | Mch-Chr11:2084976 | 2.91E-169 | wgd | |
| Mch1g1246 | Mch-Chr1:14737877 | Mch2g0787 | Mch-Chr2:5419291 | 1.25E-60 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 77131 | PF00067 | p450 | 1.70E-97 | No_clan | Mch | PK |
Pathway information