Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1273 ATGATGCAATTCAGCGAGACTCCTCCGCCACGATTGCACCAAACAACGACCACTAACTCATTTCCACAGCAGCGGTCGATAATGAATAAGAACCAAACGACGACCCAATTCCGGACGAGGCCATGGCCTGGTTTCCCTACCTCCAAGTCCCTCGGCAGCAGCTTAGGCGACGCCAATTGCATGGAACAGTTGCTCGTCCACTGCGCCAACGCCATCGAAACCAACGACGCCACTCTCGCCCAGCAAATCCTCTGGGTCCTCAACAACATCGCCCCTCCCGACGGCGACTCCAACCAGCGCCTCACCTCCGCCTTCCTCCGCGCCCTCATCACACGCGCCACCAAGAGCGGCTGCTGTAAGATCCTCGCCGCCATCACCACCGCCGCCCCCGCCCTCCCCACCCACACCTTCTCCCTCATGGAGCTCGCCGCCTTCGTCGACCTAACCCCCTGGCACCGCTTCGGCTTCACCGCCGCCAATGCCGCCATTCTCGACGCCGTCGAAGGCTACTCCGTCCTCCACCTCGTCGATCTTAGCCTGATGCATTGCATGCAAATCCCCACCCTCATCGACGCCATCGCAAACCGCTTCGAGGTCCCCCCTCTTCTGAAACTGACAACTGTCGCCACCGCCGCCCTAAAGGACGCGCCGCCCACGCTCGAGCTGTCGTACGACGAGCTGGGCGCCAAATTGGTGAACTTCGCCAGGTCTAGAAACGTGAGTATGGAATTTAGAGTGGTCCCCTCGTGCTTCACAGACGGATTCGCCAACTTAATCGAGCAGCTCCGAATGCAGCATTTAATCTACGGTCAGGAAAATAGGGAGGCCCTGGTGCTGAACTGCCACATGATGCTCCATTACATCCCGGAAGAGAGCCTGAACCCGGCGCCATCGGCGGCATGTCCTAATTTGGACACGTCGTCGTCCCTGCGGTCGATGTTCCTGAAGGCCGTCCGCAACCTGGAGCCGAGGATGGTGGTGGTGGTGGACGAGGACGCGGATTTGACGTCGAGCAAACTGGTGTGCCGTCTGAGATCGGCGTTCAATTACCTGTGGATTCCGTACGATTCGATGGAGTGGTTTCTGGGTGGGAGCAGCAGGCAGAGGGAGTGGTACGAGGCGGAGATCTGCTGGAAGATCGAGAACGTGATCGCGCAGGAAGGTGCTGAGAGAGTGGAGAGATTGGAGGCGAAGAGCCGGTGGGTTGAACGGATGGGGAACGCCAACTTCCGTGGGGTTCCGTTCGGAGAGGACGCCGTTTTGGAGGTGAAGACGATGCTGGAGGAGCATGCAGCCGGTTGGGGGTTGAAGAAGGAGGAGGACCACCTGCTGCTCACGTGGAAAGGCCACGACGTCGTTTTCGCCACCGCTTGGGTGCCTTGC 1383 59.73 MMQFSETPPPRLHQTTTTNSFPQQRSIMNKNQTTTQFRTRPWPGFPTSKSLGSSLGDANCMEQLLVHCANAIETNDATLAQQILWVLNNIAPPDGDSNQRLTSAFLRALITRATKSGCCKILAAITTAAPALPTHTFSLMELAAFVDLTPWHRFGFTAANAAILDAVEGYSVLHLVDLSLMHCMQIPTLIDAIANRFEVPPLLKLTTVATAALKDAPPTLELSYDELGAKLVNFARSRNVSMEFRVVPSCFTDGFANLIEQLRMQHLIYGQENREALVLNCHMMLHYIPEESLNPAPSAACPNLDTSSSLRSMFLKAVRNLEPRMVVVVDEDADLTSSKLVCRLRSAFNYLWIPYDSMEWFLGGSSRQREWYEAEICWKIENVIAQEGAERVERLEAKSRWVERMGNANFRGVPFGEDAVLEVKTMLEEHAAGWGLKKEEDHLLLTWKGHDVVFATAWVPC 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14934975 14936357 - MC01g0917 Mch1g1273 676165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1273 461 Pfam GRAS domain family 61 458 IPR005202 -
Mch1g1273 461 ProSiteProfiles GRAS family profile. 52 459 IPR005202 -
Mch1g1273 461 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 48 458 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Mch1g1273 461 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1273 Mch-Chr1:14934975 Mch4g0210 Mch-Chr4:1375170 8.68E-110 dispersed
Mch1g1273 Mch-Chr1:14934975 Mch9g0656 Mch-Chr9:4940905 5.43E-08 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42735 PF03514 GRAS 2.70E-90 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1273 - - - 0.0