Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1285 ATGGATACCTTGTTTCGGCTTGTCAATCTCCAACCTGAACAATCTTACAACTCCAGCAGAACCAATTCTAGCAGCTCTAGATCTTCCAGACAAAACCAATACCACTACCACCAACAGGAACACGAAGACGAAGAATGCTACAACCTTCTCATGGATGAGGAAGATTTCTCATCGTCTAGTAATTCTAGACAATACTACAATCCCTACCAGACCCACCATGCTTCCACCGCCACCGCCACCGCTACCGCCTCCACAACCCCCACCGCCACCACCCCCACGCCGATCGATCAATTCTCATTCTCCCCCTCCCCGGACTTCAACTTCGAATTTTCCGGCCGGTGGGCCCCAGATGTTCTCCTAGAAACCGCCCGCGCTATTTCTGACAGGAACAGTGGCCGCGTCCAGCAACTTATGTGGATGCTAAACGAGCTTAGCTCCCCCTACGGAGATACGGATCAAAAGCTCGCTGCCTATTTCCTGCAGGCCTTGTTTAGCCGTATGACAGATTCCGGCGAGCGTAATTACCGCGCTCTGGCCTCCGCGTCGGAGAAAACCTGCTCATTCGAATCAACTAGGAAAATGATGCTCAAGTTTCAGGAGGTTAGCCCCTGGACCACATTTGGCCATGTCTCTTGCAATGGCGCATTAATTGAGGCTTTGGAAGGTGAATCGAAGCTACACATAATCGACATCAGCAACACATATTGCACTCAGTGGCCTACTTTGTTAGAAGCACTCGCGACTCGTACCGACGACACGCCGCACCTCCGCCTCACCACCGTCGTGGTGACCACCAAGCCCGGCGGAGGAAACGGAGTCGCCGCATCTCAAAAGGTAATGAAGGAAATAGGCACAAGAATGGAAAAGTTCGCTAGGCTTATGGGCGTACCTTTCAAATTCAATGCGCTGTACCATTCCGGCGATCTTTCGGAATTGGACTTCGCCAAATTAGACATCAAAGAAGACGAGGCGCTGGCCGTCAACTGCGTTGGAGCGCTGCGTTCCGTGGCGGCGATTAATAACCGCCGAGATTTCTTGATTTCGTCTTTCCGCAGCTTACGCCCGCGGATAATCACGGTGATAGAAGAGGAAGCCGATCTCGACGTAGGCGTGGATGGCCTTGAATTTCTGAGAGGCTTCCAAGAATGTTTGCGGTGGTTTAGGGTTTACTTCGAGACATTGGACGAGAGTTTCTCGAGGACGAGCAACGAGCGGTTGATGCTCGAGCGGGCGGCCGGTAGGGCAATCGTGGACCTGGTGGCTTGCTCGGCGGCGGAGTCTGTGGAGAGGCGGGAATCGGCGGCGCGTTGGGCTCAGCGGCTGCATGGAAACGGATTCAGTCCGGTGACGTTCAGCGACGAAGTAAGCGACGACGTAAGGGCGCTTTTGAGGAGGTACAAGGAAGGGTGGGCGATGACACAGAGCTCGGACGTCGCCGGAATATTCTTGACGTGGAAAGACCAGCCGGTGGTGTGGGCCAGTGCATGGAGACCT 1494 53.95 MDTLFRLVNLQPEQSYNSSRTNSSSSRSSRQNQYHYHQQEHEDEECYNLLMDEEDFSSSSNSRQYYNPYQTHHASTATATATASTTPTATTPTPIDQFSFSPSPDFNFEFSGRWAPDVLLETARAISDRNSGRVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGERNYRALASASEKTCSFESTRKMMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVVTTKPGGGNGVAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGDLSELDFAKLDIKEDEALAVNCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLDVGVDGLEFLRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRESAARWAQRLHGNGFSPVTFSDEVSDDVRALLRRYKEGWAMTQSSDVAGIFLTWKDQPVVWASAWRP 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15032342 15033835 - MC01g0929 Mch1g1285 676177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1285 498 ProSiteProfiles GRAS family profile. 106 497 IPR005202 -
Mch1g1285 498 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 70 496 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0008356(PANTHER)|GO:0009956(PANTHER)|GO:0043565(PANTHER)|GO:0045930(PANTHER)|GO:0048366(PANTHER)|GO:0055072(PANTHER)
Mch1g1285 498 MobiDBLite consensus disorder prediction 9 42 - -
Mch1g1285 498 Pfam GRAS domain family 117 497 IPR005202 -
Mch1g1285 498 MobiDBLite consensus disorder prediction 9 33 - -
Mch1g1285 498 MobiDBLite consensus disorder prediction 77 97 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1285 Mch-Chr1:15032342 Mch2g1341 Mch-Chr2:9494540 1.69E-180 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42739 PF03514 GRAS 1.30E-104 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1285 K27743 - csv:101204711 825.083