Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1291 ATGGAAAGGTTTTTGGAGGAGAATTTTGGGGGTGTCAAACCAAAAAACTCGTCTGAGGAGGTGTTGCAAAGGTGGAGGGAGCTTTGTGGAGTTGTCAAGAACCCCAAAAGGAGGTTTCGCTTCACCGCCAATCTCTCCAAACGTGGCGAAGCTGCTGCTATGCGCCAGAACAATCAGGAGAAGTTGAGGATCGCAGTTTTAGTCTCAAAAGCTGCATTTCAGTTCATCCAAGGTGTAGTTCTGGAATTTGACAAAGTAATGTGGTTATGTAAGGTGTTTTTCTCATATTTGATGGAACTTGTCGTGGTATCTGGTGTGCAACCGAGTGATTATAATGTTCCGGAGGAAGTCAAAGCTGCAGGTTTCCAAATTTGTGCTGATGAGCTCGGGTCTATTGTTGAAGGCCATGACCCAAAGAAGTTTAAACATCATGGTGGGGTTGAAGGGATTGCAGGAAAGCTCTGTACATCAACAACAAATGGGCTTAATAGCGATCCTGATGCACTCAATCGCAGGCAAGAAATTTATGGAGTTAACAAATTTGCTGAGAGCGAACAGAGGAGTTTCTTGGTGTTCGTTTGGGAGGCCCTCCAAGACATGACTCTCATGATCCTTGGACTCTGTGCTTTTGTCTCTTTGGTAGTTGGCATAATAACAGAGGGGTGGCCACATGGGGCTCACGATGGCCTTGGAATTGTTGCCAGTATCTTACTAGTTGTATTTGTCACGGCAACTAGTGATTATCGACAATCCTTACAGTTCAAGGACTTGGATAAGGAGAAAAAGAAGATATCAATTCAGGTCACAAGGAATGGTTATAGACAGAAAATGTCGATTTACGATTTACTTCCTGGAGATATTGTACACCTGTCTATTGGGGATCAAGTCCCTGCAGATGGACTCTTTGTTTCAGGGTTCTCTGTGTTGATTGATGAGTCAAGTTTGACTGGAGAAAGTGAGCCAGTGATGGTGACTGCAGAGAACCCATATCTTCTATCAGGAACTAAAGTTCAAGATGGATCCTGCAAGATGATGGTCACTACTGTTGGGATGAGAACACAATGGGGTAAGTTGATGGCCACTCTTAGTGAAGGTGGAGATGACGAAACTCCATTGCAGGTGAAATTGAATGGAGTGGCAACAATTATTGGGAAAATAGGTCTATTCTTTGCCATTATCACTTTCGCTGTGTTGGTTCAAGGATTGGTTAGCCGTAAACTTCGAGAAGGGACTCACTGGAGTTGGTCTGCAGACGATGCCTTAGAGATATTGGAATTCTTTGCTGTTGCAGTCACAATTGTTGTTGTTGCTGTGCCAGAGGGGCTTCCTTTGGCTGTGACGTTGAGCCTTGCCTTCGCCATGAAGAAGATGATGAATGATAAAGCACTGGTCCGTCACCTGGCAGCTTGTGAAACTATGGGTTCTGCCACAAGTATTTGTAGTGACAAGACTGGAACAATCACCACAAATCGCATGACAGTAGTTAAATCATGCATTTGCATGAATGTCAAGGAATCAAGTAATAATGTTTCAAGCTTCTGTTCTGACCTTCCAGCCTCTCTTATCAAACTTCTCCAACAATCAATATTCAACAACACTGGGGGAGAAGTTGTAATCAACAAAGATGGCAAGCGTGAGTTGTTGGGCACTCCCACTGAGACTGCATTATTAGAGTTTGGTCTCTCACTTGGTGGGGATTTTCAGGCTGAGAGACAGGCAGCTAAACTTATTAAAGTTGAGCCATTCAACTCTGAGAAAAAACGGATGGGTGTTGTCTTACAATTTCCTGAAGGTGGTTTCCGTGCTCACACTAAAGGTGCTTCAGAAATAGTGTTGGCTGCCTGTGACAAGGTGATCAATTCGAGTGGTGAGGTTGTTCCTTTAGATGAAGCTTCCATCAAGCATCTCAATGTTATTATCAATCAGTTTGCTGGTGAAGCTCTCCGAACACTTTGCCTTGCCTATATGGAACTGGAAAATGGATTCTCTGTCAAAGATCCTATTCCAGTTTCTGGTTATACCTGTATAGGTATAGTGGGTATTAAAGATCCCGTTCGTCCCGGTGTTAAAGAGTCAGTTGCGGTTTGTCGTTCAGCTGGTATTACTGTACGAATGGTTACTGGTGACAATATCAATACAGCTAAAGCTATTGCTAGAGAATGTGGAATTCTCACAGATGATGGCATTGCCATTGAGGGTCCAGATTTCAGAGAGAAGACCCTAGACGAATTGCTTAAAATTATTCCCAAAATTCAGGTGATGGCTCGATCTTCACCTCTTGATAAGCACACTCTGGTCAAGCATTTGCGGACCACTTTTGATGAAGTTGTTGCTGTTACTGGTGATGGGACAAACGATGCTCCTGCTCTTCACGAAGCAGATATTGGTCTTGCAATGGGCATTGCTGGAACTGAGGTTGCCAAAGAGAGTGCTGATGTGATAATTCTCGATGATAATTTCTCCACCATAGTGACTGTGGGAAAATGGGGTCGTTCCGTTTACATAAATATTCAAAAATTTGTGCAGTTCCAGCTGACTGTAAACATAGTAGCGTTGATCGTAAACTTCTCTTCAGCTTGTGTGACAGGTAGTGCTCCTCTTACGGCAGTCCAGCTCTTGTGGGTGAACATGATAATGGATACACTTGGAGCGCTGGCACTCGCCACTGAGCCTCCAAATGATGAATTGATGAAGCGCTTACCTGTTGGGAGGAGAGGAAGTTTTATCAGCAATGTCATGTGGAGGAATATATTGGGGCAATCCTTGTATCAGTTCTGCGTGATATGGTTTCTGCAGGCGAAAGGAAAAGCAATGTTTGATCTCGAGGGCCCTGGTTCCGATTTGATACTGAATACGCTCATCTTCAATTCCTTTGTGTTCTGTCAGATTTTCAACGAAATAAGTTCCAGGGAGATGGACAAAATCAATGTGTTCAAAGGCATACTTGATAACTATGTGTTTGTAACTGTGCTTGGTTCCACCTTGGTGTTCCAAATAATTATCATCGAGTTCCTGGGAACATTTGCAAGCACGACCCCTCTGGATATGTCGCAGTGGCTCTTTTGTGTGGCAATTGGATTTATAGGGATGCCAATTGCTGCCATCTTGAAGACTATCCCAGTATAA 3126 43.63 MERFLEENFGGVKPKNSSEEVLQRWRELCGVVKNPKRRFRFTANLSKRGEAAAMRQNNQEKLRIAVLVSKAAFQFIQGVVLEFDKVMWLCKVFFSYLMELVVVSGVQPSDYNVPEEVKAAGFQICADELGSIVEGHDPKKFKHHGGVEGIAGKLCTSTTNGLNSDPDALNRRQEIYGVNKFAESEQRSFLVFVWEALQDMTLMILGLCAFVSLVVGIITEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYDLLPGDIVHLSIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVTAENPYLLSGTKVQDGSCKMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAIITFAVLVQGLVSRKLREGTHWSWSADDALEILEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTITTNRMTVVKSCICMNVKESSNNVSSFCSDLPASLIKLLQQSIFNNTGGEVVINKDGKRELLGTPTETALLEFGLSLGGDFQAERQAAKLIKVEPFNSEKKRMGVVLQFPEGGFRAHTKGASEIVLAACDKVINSSGEVVPLDEASIKHLNVIINQFAGEALRTLCLAYMELENGFSVKDPIPVSGYTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREKTLDELLKIIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVGKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACVTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGSFISNVMWRNILGQSLYQFCVIWFLQAKGKAMFDLEGPGSDLILNTLIFNSFVFCQIFNEISSREMDKINVFKGILDNYVFVTVLGSTLVFQIIIIEFLGTFASTTPLDMSQWLFCVAIGFIGMPIAAILKTIPV 1041
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 15068526 15073718 + MC01g0935 Mch1g1291 676183
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1291 1041 PRINTS H+-transporting ATPase (proton pump) signature 812 837 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch1g1291 1041 PRINTS H+-transporting ATPase (proton pump) signature 636 654 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch1g1291 1041 PRINTS H+-transporting ATPase (proton pump) signature 780 796 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch1g1291 1041 SMART Cation_ATPase_N_a_2 141 217 IPR004014 -
Mch1g1291 1041 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 486 689 IPR023299 GO:0000166(InterPro)
Mch1g1291 1041 Gene3D - 17 77 - -
Mch1g1291 1041 FunFam Calcium-transporting ATPase 673 825 - -
Mch1g1291 1041 FunFam Calcium-transporting ATPase 797 1041 - -
Mch1g1291 1041 NCBIfam HAD-IC family P-type ATPase 232 402 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch1g1291 1041 NCBIfam HAD-IC family P-type ATPase 417 506 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch1g1291 1041 NCBIfam HAD-IC family P-type ATPase 747 865 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch1g1291 1041 PRINTS P-type cation-transporting ATPase superfamily signature 311 325 - -
Mch1g1291 1041 PRINTS P-type cation-transporting ATPase superfamily signature 780 799 - -
Mch1g1291 1041 PRINTS P-type cation-transporting ATPase superfamily signature 677 688 - -
Mch1g1291 1041 PRINTS P-type cation-transporting ATPase superfamily signature 480 494 - -
Mch1g1291 1041 PRINTS P-type cation-transporting ATPase superfamily signature 699 709 - -
Mch1g1291 1041 PRINTS P-type cation-transporting ATPase superfamily signature 804 816 - -
Mch1g1291 1041 NCBIfam calcium-translocating P-type ATPase, PMCA-type 138 1041 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Mch1g1291 1041 SUPERFAMILY Calcium ATPase, transmembrane domain M 143 1040 IPR023298 -
Mch1g1291 1041 SUPERFAMILY HAD-like 479 885 IPR036412 -
Mch1g1291 1041 Pfam Cation transporter/ATPase, N-terminus 143 212 IPR004014 -
Mch1g1291 1041 FunFam Calcium-transporting ATPase 490 684 - -
Mch1g1291 1041 Pfam Cation transporting ATPase, C-terminus 865 1038 IPR006068 -
Mch1g1291 1041 Pfam Cation transport ATPase (P-type) 540 618 - -
Mch1g1291 1041 FunFam Calcium-transporting ATPase 17 77 - -
Mch1g1291 1041 CDD P-type_ATPase_Ca_PMCA-like 169 913 - -
Mch1g1291 1041 Pfam haloacid dehalogenase-like hydrolase 665 794 - -
Mch1g1291 1041 SFLD Haloacid Dehalogenase 462 832 - -
Mch1g1291 1041 FunFam Calcium-transporting ATPase 243 363 - -
Mch1g1291 1041 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516(InterPro)
Mch1g1291 1041 Gene3D - 195 1038 - -
Mch1g1291 1041 SUPERFAMILY Calcium ATPase, transduction domain A 266 360 IPR008250 -
Mch1g1291 1041 SFLD p-type atpase 462 832 IPR044492 -
Mch1g1291 1041 ProSitePatterns E1-E2 ATPases phosphorylation site. 482 488 IPR018303 -
Mch1g1291 1041 Pfam E1-E2 ATPase 263 459 - -
Mch1g1291 1041 Gene3D - 477 825 IPR023214 -
Mch1g1291 1041 Gene3D - 167 363 - -
Mch1g1291 1041 PANTHER CATION TRANSPORTING ATPASE 113 1041 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Mch1g1291 1041 Gene3D - 490 684 IPR023299 GO:0000166(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1291 Mch-Chr1:15068526 Mch4g1640 Mch-Chr4:19612194 0 dispersed
Mch1g1291 Mch-Chr1:15068526 Mch11g0362 Mch-Chr11:2235763 0 wgd
Mch1g1291 Mch-Chr1:15068526 Mch2g1310 Mch-Chr2:9270897 2.18E-17 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1291 K01537 - csv:101212315 1855.49