Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1362 GTGGTTGAACCGATGAAATGTGGTTGCAGAGAGACAGGTGAAAAGGATGTGGCCTTTAAAGTTATTTATTGTGGAATATGCCATTCCGACCTTCACATGTTGAAGAATGAGTGGGGCAATACCGTCTACCCCTTAGTTCCTGGGCATGAAATCGTGGGAGAGGTGACGGAGGTTGGAAGCAAAGTAGAGAAATTCAAGGTCGGGGACAAGGTGGGCGTAGGATGTATGGTGGGATCCTGCCGCTCCTGCGACAGCTGTTCCAACCAGCTCGAGAATTACTGCGCCAAAATGATTCTCACCTACGGTTCCAAGAACACCGATGGGACCATGACCCACGGCGGCTACTCCGACTGCATGGTTGCCGACGAGCATTTCATCGTCCGCATTCCGGATGGCATGCCTCTGCACGCGGGCGCTCCGCTGCTGTGCGCTGGCATCACCGTTTACAGCCCCTTGAGATACTATGGCCTTGACAAGCCTGGAATGCACATTGGTGTGGTCGGCCTAGGCGGCCTCGGCCATGTCGCCGTCAAATTCGCCAAGGCCTTCGGCGTTAAGGTTACTGTTATCAGTACCTCCCCTAGCAAGAAGCAGGAAGCTGTGGACCGTCTTGGGGCTGATTCCTTCTTGGTCAGCCGTGATCAAGACCAAATGCAGGCTGCCAGGGGGACGTTGGATGGTATCATAGACACAGTCTCTGCTCTACATCCTCTCCTTCCTTTGCTCGCCCTCATCAAACCACATGGAAAGCTTGTTATGGTTGGTGCACCGGAGAAGCCGCTCGAGCTCCCGGCCTTTGCTCTTATCGGCGGTAGGAAAACAGTGGCCGGTAGTTGCATTGGAGGGATGAAGGAAACTCAGGAGATGATTGATTTTGCGGCCAAGCACAATATAACTGCGGATGTGGAGGTGATCCCGATCAGCGACGTCAACACTGCCATGGAGCGGATGCTAAGACAAGATGTCAAATATCGATTCGTCATTGACATTGCAAAGACAATGAAACCTAGCAATTAA 1017 52.61 VVEPMKCGCRETGEKDVAFKVIYCGICHSDLHMLKNEWGNTVYPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCMVGSCRSCDSCSNQLENYCAKMILTYGSKNTDGTMTHGGYSDCMVADEHFIVRIPDGMPLHAGAPLLCAGITVYSPLRYYGLDKPGMHIGVVGLGGLGHVAVKFAKAFGVKVTVISTSPSKKQEAVDRLGADSFLVSRDQDQMQAARGTLDGIIDTVSALHPLLPLLALIKPHGKLVMVGAPEKPLELPAFALIGGRKTVAGSCIGGMKETQEMIDFAAKHNITADVEVIPISDVNTAMERMLRQDVKYRFVIDIAKTMKPSN 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15570869 15573591 - MC01g0998 Mch1g1362 676254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1362 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 133 298 IPR036291 -
Mch1g1362 338 SUPERFAMILY GroES-like 8 161 IPR011032 -
Mch1g1362 338 CDD CAD1 1 329 IPR047109 GO:0016616(InterPro)
Mch1g1362 338 Gene3D - 144 300 - -
Mch1g1362 338 Pfam Zinc-binding dehydrogenase 171 294 IPR013149 -
Mch1g1362 338 PANTHER ALDEHYDE REDUCTASE 2 332 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Mch1g1362 338 Gene3D - 2 330 - -
Mch1g1362 338 FunFam Uncharacterized protein 1 143 - -
Mch1g1362 338 SMART PKS_ER_names_mod 1 328 IPR020843 GO:0016491(InterPro)
Mch1g1362 338 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 48 62 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Mch1g1362 338 FunFam Cinnamyl alcohol dehydrogenase 144 300 - -
Mch1g1362 338 Pfam Alcohol dehydrogenase GroES-like domain 14 131 IPR013154 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1362 Mch-Chr1:15570869 Mch2g1704 Mch-Chr2:15623953 6.61E-169 dispersed
Mch1g1362 Mch-Chr1:15570869 Mch10g0473 Mch-Chr10:3081271 6.53E-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1362 K23232 - csv:101222715 594.734