Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1431 TTTTCTATTTTCTGCAATTATTCTCATCTTTTGTTCAATTACGCTCCCATTCCCCCCCTTCTGATTTCTCCCCGTTTCCTCAGTTCCCTTTCTGTCATCCTCTGTCTTTCAAACAAGATTTTGGGTTTTTTCTGTTTCTTCTTTGGATTTAATCTTACATTTTCTATAGATGTTTACAGTGGAATTTCGACGCCGGGTTACTCTTCCGATCCGTTTAGTGAAGAATTAATGAAAGCGCTTCAACCTTTTATGAAAAGTGTTATCTCAACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTATTCTCCAGCTTCTTCTCAGCCTGAATTGAGCCCTGATTTTTGCTCCCCGTCGAGCACCCGCTTGTTTTCTCAAGGGTTCTCGAGTATTGAACAAATGGGTCTTGAGCAATCAGGTCCAATCGGGCTAAACAATCTCACTTCTTCTCAGATTCTCCAAATTCAAGCTCAAATCCAAATACCCCCACAAAGCATGCCTTCCTTCTCTGCCGCTCAGATTTCTTCCCAATACCATAACTTCCTTGCCCCAAAATCCATCCCCATGAAGCACGTGGGCTCTCCGCCCAAGCCCACCAAGCTCTACAGAGGAGTCCGGCAGCGCCACTGGGGAAAATGGGTGGCCGAAATCAGACTCCCCAAGAACCGCACCAGACTCTGGCTCGGCACTTTCGACACGGCGGAGGAGGCAGCTTTAGCCTATGATAAAGCTGCTTACAAGCTCCGTGGAGATTTTGCCAGGCTCAATTTCCCACATCTCAAGCACCAATTCGGAGACTTCAAACCCCTTCACCCTTCTGTAGACGCCAAGCTTCAAGCAATTTGTCAGAGCTTGAAACAGGGGAAAACAGAGCAGCTCTGTTCCGTGGCCGATGAAAAACTGACGACTCCACCTGAATTGGAATTGAAAACCGAAGTGGAGACTTCTCCATCCTCTTCATCCTCATCGTCGTCTCCTTCACGGTCTGAAGATTACTCCACGGGATCATCCCCTGAGTCGAGTATTAGCTTCTTGGATTTCTCAGATTATCAGTGGGGTGAAGGAGAAGCCTTTGGATTGGAAAAGTATCCTTCGGTTGAAATAGATTGGGCAGCTCTGAGTCAGCTGGCTGAATCGGAGTGT 1152 46.53 FSIFCNYSHLLFNYAPIPPLLISPRFLSSLSVILCLSNKILGFFCFFFGFNLTFSIDVYSGISTPGYSSDPFSEELMKALQPFMKSVISTSSSSSSSSSSSSSAYSPASSQPELSPDFCSPSSTRLFSQGFSSIEQMGLEQSGPIGLNNLTSSQILQIQAQIQIPPQSMPSFSAAQISSQYHNFLAPKSIPMKHVGSPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPHLKHQFGDFKPLHPSVDAKLQAICQSLKQGKTEQLCSVADEKLTTPPELELKTEVETSPSSSSSSSSPSRSEDYSTGSSPESSISFLDFSDYQWGEGEAFGLEKYPSVEIDWAALSQLAESEC 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16064319 16065746 - MC01g1060 Mch1g1431 676323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1431 384 ProSiteProfiles AP2/ERF domain profile. 204 261 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch1g1431 384 MobiDBLite consensus disorder prediction 315 345 - -
Mch1g1431 384 SUPERFAMILY DNA-binding domain 204 262 IPR016177 GO:0003677(InterPro)
Mch1g1431 384 Gene3D AP2/ERF domain 204 262 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch1g1431 384 SMART rav1_2 204 267 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch1g1431 384 PRINTS Ethylene responsive element binding protein signature 227 243 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch1g1431 384 PRINTS Ethylene responsive element binding protein signature 205 216 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch1g1431 384 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 71 377 IPR051758 GO:0005634(PANTHER)|GO:0043565(PANTHER)
Mch1g1431 384 MobiDBLite consensus disorder prediction 307 345 - -
Mch1g1431 384 Pfam AP2 domain 204 253 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch1g1431 384 MobiDBLite consensus disorder prediction 91 119 - -
Mch1g1431 384 CDD AP2 203 263 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Mch1g1431 384 FunFam Ethylene-responsive transcription factor 2 203 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0797 Mch-Chr11:5371170 Mch1g1431 Mch-Chr1:16064319 1.09E-68 dispersed
Mch1g1431 Mch-Chr1:16064319 Mch6g1948 Mch-Chr6:21921317 4.30E-33 dispersed
Mch1g1431 Mch-Chr1:16064319 Mch8g0335 Mch-Chr8:2362414 4.23E-17 wgd
Mch1g1431 Mch-Chr1:16064319 Mch8g0200 Mch-Chr8:1320538 3.03E-85 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42761 PF00847 AP2 9.10E-15 CL0081 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1431 K09286 - csv:101211347 469.159