Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch1g1480 | ATGCTCAAGTGCTTATCATTAGTGATTGCTTCGCTGATTCTCTCCGCCTTTGCACAAGACATCCCCCCAAATAAGAAATGGCTCACTTTGAAAGGAGAAGCGCCGATAGTAATAGCTCGAGGTGGGTTGTCGGGAGTGTTTCCAGAATCGAGTACATTTGCAAATCAAATGACGATGGTTACAAGTGTGAATAGCACAGCGCTGTACTGCAACCTCCAACTAACCAAAGATGGGGTTGGGATTTGCCTAACAGATCTCAGGCTTCAAAACTCTACTAATATTGAAGCTATCTTCCCTGACGCTGAAAAGACTTACACAGTTAATGGAAAGATTTTGAAAGGATGGTTTTCTTGCGATTACAGTTCTGAACAACTTTTTTCCCAAGTCAATTTGATTCAAAGTATGTACTCCCGACCAATTGTGTACGATGATCTTCTGCCAATATCTGCCGTTGAAGATGTGATCGGACTTAAGCCAAGCCGATTTTGGTTGAACATAGAGTACGAAGCATTTTACCGAGAACATAACCTGAGCGTGACATCATACGTTCAAAAGGCAGTGAGGCTTATGGGCATAACTTATGTGTCATCTTCGGAGATTGGTTTACTGAAGGCCCTAAACGAGAAGGGGATGGTGAACCGAGCCAGAACCAAGCTCATCTTCCGGTTCTTAGAGGCCACAGAGATCGAGCCCACCACCCAGAAGACGTACGGGGAGCTGGCTCGGGATCTACCCATGATCCGGAGCTTTGCCGCCGGAATCCTGGTCCGGAAGGAGTACATTTGGCCCATCGGAAAAGACAAGTACGTGCAGCCGGCCACAGGGCTTGTGGAGGTTGCCCACAAGATGGGTATGGAGATTTTTGCGTCTGGTTTCGCCAACGACATGATGGTGGGCTACAACTATAGCTATGACCCAATCAAAGAGTATCTTCAGTTCGTGGATAATGGCAAATTTTCTGTTGATGGGCTTCTCTCCGACTTCTCCCCCTCTGCAACACAGGCCGTGGAGTGCTTTTCCAGTTACAAAAACGATGGCAAGCGAAAGCCGGGCGAGGAAGCTTTGGTGATCAGCAGCAATGGGGCAAGCGGGGATTTCCCGCCCTGCACAGACCTTGCTTATGAAAGGGCAGTTGAAGACGGCACCGATATCATCGACTGCTCTGTTCAATTGTCCAAAGATGGAGTTGCCTTCTGTATGGATTCCGTGGATCTTCTCTCCGGTACCACTGCCATCATTCCTTTCGCTGCTCGAACTTCCACTGTTCCTGAGATTCAGTCCGAGCCTGGAATTTTCTCCTTCGATCTCACTTGGCCTGAGATTCTCACTCTCATGCCTCAAATCACAAACCCTTTCATGGCCACCTCCGGGATCCAGAGAAATCCGGCCTTCAAGAACAAGGGCAAGTTTTTTACCCTTTCTCAGTTTCTTGACTTCGCTAAAGCCAAAGCTGTTGCTGGGGTTATGATCAACATTCAACATGCGTCGTACTTAGCAGCAAAGAAAGGTCTGGACATAATAGAAATCGTGACGAACAGTCTGAAAAACGCTACGTTGGAGAACCAGCGAGTGTTCATTAGATCAGACGACACTTCGGTGCTGTCTAACTTCCAAAAAATTCCAAACTACACTCGAGTGTTGACGGTAGATACCAAGATAGGCGACGCCCCGATGAAGCCCCTGGAGGAGATCAGGCACCATGCACAAGCCGTGGCCATCCCTCGAGCCTCCGTCATCAAGATCACCAACTACTTCACCACCGGCGTGACCAAAGTGGTGAAAGAGATGCAAGCTGCTAATCTCACGGTCTTCGTGTTCGTGATGAGGAACGAATACGTGTCTTTGGCCTATGATTTCTTCTCCGAATCCACCATGGAGATCGCCACCTACGTGGACCTCTTCCACGTGGACGGCGTCATCACCGAGTTCCCTAAGAGTGCCAGTAGATACATAACTTGTCCATGCAGGACCAACTTGCCAAGAAATGATTCTTATTCAATCATGCCACCAGAAATAGGTTCGCTGCTGGATTTGGTCCCGGAGTATGCTCAACCACCGGCCGATGCTCCATTCCCGCCGTTGAATGTGGGGGATATCGTGGACCCGCCGCTCCCGCCGGTCAGCAAGAATGCCACTAACGGCGGCTCCTCTAAAGTCGGTGGGCCGGCCACCGGCACATCGTCACCGGCCCTCTCAAACCACCTTCCTAACTTGTTTCTCTCTCTATTCTGCATTTTCATGCTTACACTTACCCTCCTCTCCAATTCTCACTCTGCCCTATAA | 2283 | 49.19 | MLKCLSLVIASLILSAFAQDIPPNKKWLTLKGEAPIVIARGGLSGVFPESSTFANQMTMVTSVNSTALYCNLQLTKDGVGICLTDLRLQNSTNIEAIFPDAEKTYTVNGKILKGWFSCDYSSEQLFSQVNLIQSMYSRPIVYDDLLPISAVEDVIGLKPSRFWLNIEYEAFYREHNLSVTSYVQKAVRLMGITYVSSSEIGLLKALNEKGMVNRARTKLIFRFLEATEIEPTTQKTYGELARDLPMIRSFAAGILVRKEYIWPIGKDKYVQPATGLVEVAHKMGMEIFASGFANDMMVGYNYSYDPIKEYLQFVDNGKFSVDGLLSDFSPSATQAVECFSSYKNDGKRKPGEEALVISSNGASGDFPPCTDLAYERAVEDGTDIIDCSVQLSKDGVAFCMDSVDLLSGTTAIIPFAARTSTVPEIQSEPGIFSFDLTWPEILTLMPQITNPFMATSGIQRNPAFKNKGKFFTLSQFLDFAKAKAVAGVMINIQHASYLAAKKGLDIIEIVTNSLKNATLENQRVFIRSDDTSVLSNFQKIPNYTRVLTVDTKIGDAPMKPLEEIRHHAQAVAIPRASVIKITNYFTTGVTKVVKEMQAANLTVFVFVMRNEYVSLAYDFFSESTMEIATYVDLFHVDGVITEFPKSASRYITCPCRTNLPRNDSYSIMPPEIGSLLDLVPEYAQPPADAPFPPLNVGDIVDPPLPPVSKNATNGGSSKVGGPATGTSSPALSNHLPNLFLSLFCIFMLTLTLLSNSHSAL | 760 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 16341037 | 16344839 | - | MC01g1089 | Mch1g1480 | 676372 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch1g1480 | 760 | SUPERFAMILY | PLC-like phosphodiesterases | 355 | 651 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Mch1g1480 | 760 | ProSiteProfiles | GP-PDE domain profile. | 354 | 651 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Mch1g1480 | 760 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 361 | 645 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Mch1g1480 | 760 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 353 | 652 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Mch1g1480 | 760 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 34 | 336 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Mch1g1480 | 760 | FunFam | Glycerophosphodiester phosphodiesterase GDPDL3 | 352 | 651 | - | - | |
| Mch1g1480 | 760 | CDD | GDPD_SHV3_repeat_2 | 354 | 650 | - | - | |
| Mch1g1480 | 760 | PANTHER | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | 6 | 726 | - | GO:0008889(PANTHER) | |
| Mch1g1480 | 760 | MobiDBLite | consensus disorder prediction | 705 | 727 | - | - | |
| Mch1g1480 | 760 | FunFam | Glycerophosphodiester phosphodiesterase GDPDL3 | 33 | 335 | - | - | |
| Mch1g1480 | 760 | ProSiteProfiles | GP-PDE domain profile. | 35 | 336 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Mch1g1480 | 760 | MobiDBLite | consensus disorder prediction | 709 | 727 | - | - | |
| Mch1g1480 | 760 | SUPERFAMILY | PLC-like phosphodiesterases | 34 | 334 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g1232 | Mch-Chr11:8732080 | Mch1g1480 | Mch-Chr1:16341037 | 7.85E-194 | dispersed |
Pathway information