Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1485 ATGGCGGGCCGTTCTGAAGAAGAAGAAGATGAAAGCTCCTGCTCCAACTCCTTCAAGACAATTGGTGGCGCTTTCGGTTGGTTCGTTGGGGACGACGATTTTGAAGATTTGGGTTCCGAATTCGTCTTCAAGATCGAACCTAGCTTGCTCATTGACCCTACTGGTTTGAAGATTGGTCAAGTCATTGGAGAAGGTTCATGCTCCATTGTCTACGAAGGACTGTACGATTACCGGCCTGTCGCCGTGAAGGTTATACAGCCAAGCAGAACTTCAGCTATTAGTTTTGAAAGAAAGGAAAGATTTCAGAGAGAGGTTATATTGCTATCAAGGGTGAATCATGAGAACGTTATTCAGTTCATTGGCGCTACCCTAGAGCCGACATTGATGATAATCACTGAGCTTATGAGAGGTGGAACACTTCAGAAGTACTTGTGGAGCATTCGCCCAGATACCCCAGATCCGAAACTTTCCTTAAGTTTTGCTCTAGATCTATCACGAGTAATGGCATACTTGCATGCAAATGGCATCATTCATCGCGACTTAAAGCCAAGCAATCTACTGCTGACAGAAGACAAGCAACGGGTTAAGCTTGCAGATTTTGGGTTAGCTAGAGAGGAGATATCTGGTGAAATGACTACTGAGGCGGGTACTTACCGTTGGATGGCCCCTGAGCTATTTAGCATTGATCCATTGCCTGTTGGAGGCAAGAAATGCTATGATCACAAGGCAGATGTCTACAGCTTCTCAATAATTCTCTGGGAATTGCTGACGAACAAGACTCCATACAAGGGCAGAAACAATGTTATGGTAGCATATGCCACAGCCAAGAAAATAAGACCAAGTCTCGAGGAAATCCCAGAAGATATTGCCCCTCTCTTGCAGTCATGCTGGGCTGAGGATCCCAGTGGCCGTCCCGAATTTACAGAAGTTACAGATTCTCTGTGTAATCTTCTTCAAACTTTTGTCTTAAGAGAATCTGGGTTTCCTAACATGGTGGAGCAGACTGAGGAAGTCGAATGTGCATCAGACACATCGTCTTCTCTGAGTAAGAGACAGCACAAGGCCGGAAGATCGCATAGAAACTCTTCATCCTGCCTAAAATGCTGCTACAACTACTGCTTGTCTGATTAA 1131 45.09 MAGRSEEEEDESSCSNSFKTIGGAFGWFVGDDDFEDLGSEFVFKIEPSLLIDPTGLKIGQVIGEGSCSIVYEGLYDYRPVAVKVIQPSRTSAISFERKERFQREVILLSRVNHENVIQFIGATLEPTLMIITELMRGGTLQKYLWSIRPDTPDPKLSLSFALDLSRVMAYLHANGIIHRDLKPSNLLLTEDKQRVKLADFGLAREEISGEMTTEAGTYRWMAPELFSIDPLPVGGKKCYDHKADVYSFSIILWELLTNKTPYKGRNNVMVAYATAKKIRPSLEEIPEDIAPLLQSCWAEDPSGRPEFTEVTDSLCNLLQTFVLRESGFPNMVEQTEEVECASDTSSSLSKRQHKAGRSHRNSSSCLKCCYNYCLSD 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16374469 16378524 + MC01g1094 Mch1g1485 676377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1485 376 SUPERFAMILY Protein kinase-like (PK-like) 49 326 IPR011009 -
Mch1g1485 376 Gene3D Phosphorylase Kinase; domain 1 46 136 - -
Mch1g1485 376 PIRSF TyrPK_CSF1-R 53 157 - -
Mch1g1485 376 PIRSF TyrPK_CSF1-R 150 373 - -
Mch1g1485 376 SMART serkin_6 56 321 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1485 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1485 376 Gene3D Transferase(Phosphotransferase) domain 1 137 362 - -
Mch1g1485 376 MobiDBLite consensus disorder prediction 342 362 - -
Mch1g1485 376 ProSiteProfiles Protein kinase domain profile. 56 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1485 376 Pfam Protein tyrosine and serine/threonine kinase 56 314 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1485 376 CDD STKc_MAP3K-like 62 314 - -
Mch1g1485 376 PANTHER SERINE-THREONINE PROTEIN KINASE 50 316 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch1g1485 376 PRINTS Tyrosine kinase catalytic domain signature 285 307 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1485 376 PRINTS Tyrosine kinase catalytic domain signature 132 145 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1485 376 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1485 376 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1485 Mch-Chr1:16374469 Mch5g1998 Mch-Chr5:19693486 1.03E-93 dispersed
Mch1g1485 Mch-Chr1:16374469 Mch8g1464 Mch-Chr8:10974363 3.22E-98 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77138 PF07714 PK_Tyr_Ser-Thr 2.40E-53 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1485 - - - 0.0