Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1650 CTCAACAATGGCAAATTTCATCAACCAAGAAATTTGCCTCTACTTGAGCAGGACCTTAACTTCCTTCCTTGTTCAGCTGCTGCATCTGAAGGATCTGAGAATCAAATGAAAGAATCCTATGAACCAGGTGGGGAATTGCTGGTAATTGCAGAAAAGAAAAAAAGGGCAACAAGTGAGCACATTGCTGGAATTACTTTATCAGATCTGGCTAAATACTTCGATCTTCCAATTACAGAAGCTTCAAGAAACCTGAATGTTGGGTTGACAGTACTGAAAAGGAAATGCAGAGAATTCGGGATTCATCGCTGGCCACACAGGAAGATCAAGTCCATTGATGGTCTAATCCGAGATCTTCAGGAAGAAGCAAAGCATAGAGAGGAAGATCACAAAGCTTTGATGGCAGTAACAAAGAGGCAAAGGATGTTGCAGAGTGAAAGAGAGAGCATAGAGATGACACCATTCAGAGAGCTAGAGACTGAGACCAGGAGATTTAGGCAAGATGTTTTCAGGAGAAGACATAAAGCTAGAGCTCTAGAAAGTCAGGGCACATCAGTT 555 42.16 LNNGKFHQPRNLPLLEQDLNFLPCSAAASEGSENQMKESYEPGGELLVIAEKKKRATSEHIAGITLSDLAKYFDLPITEASRNLNVGLTVLKRKCREFGIHRWPHRKIKSIDGLIRDLQEEAKHREEDHKALMAVTKRQRMLQSERESIEMTPFRELETETRRFRQDVFRRRHKARALESQGTSV 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17412133 17412881 - MC01g1235 Mch1g1650 676542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1650 185 ProSiteProfiles RWP-RK domain profile. 46 131 IPR003035 -
Mch1g1650 185 PANTHER PROTEIN RKD4 8 183 IPR044607 GO:0003700(InterPro)
Mch1g1650 185 Pfam RWP-RK domain 64 111 IPR003035 -
Mch1g1650 185 Coils Coil 115 135 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1650 Mch-Chr1:17412133 Mch6g0234 Mch-Chr6:1562023 1.38E-19 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42781 PF02042 RWP-RK 5.90E-23 No_clan Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1650 - - - 0.0