Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1701 ATGCAAGCATCTCAGAATCGCCAGGCTTCATCTGGCATCCATGAAATGTATCACCAGTCTGTGCAAGAGATAGATCCCTACTGTTTATCGCATTTTCACGTATTGGAAAACAATGTCTGTCCTGACACAGGCAGTCAGGGAAACAGTATTAACTTTTCTTCCTGTAAGAAACAGTTCTTTACTCTGGAATCATTCCCGGCTACTGCTGATCTTAGTGCCTGTAATTCCCCTTCTGCTGTTAGTGTTCTGTCTTCCAGGAGCCCCTTCTCACCTCAAGTTTCTCAATCGTGCTCTTCGGATCAACATAATTCCTTCGACAACACATGCGGATCACCACAAAGTGGATGCTCTGTAACTGATGATGACAATGAATTAAAGCACAGGCTGAAGGAATTAGAGATTTCTCTACTGGGTCCTGAATCTGATATTGAGGATAGCTGCTACTGTTCTTTCAGGGGCGGCGCGCATCGAGATGCATCAGTGGCAAGGTGGAACTGGAATAAAATGGTCGAGATGATTCCAAGACTGAATCTTCAGGACACACTTATCACTTGTGCCCAAGCAATTCATGAGGCTGATATAAATGTGGCAACATTGTTTATGGATGTTTTAGGGCAGATGGTTTCGGTCTCCGGTGATCCAGCCCAGAGGTTGGGAGCTTACTTGTTGGAAGGGCTTAGAGCAAGGTTGGAACGATCTGGGAGTGCAATATACAAGGCCCTTAAGTGCGATGAGCCAACAAGCTCTGAACTCATGTCCTATATGTCTATTTTATTCCAGATCTGCCCATACTTCAAATTTGCATACACTTCTGCAAATGTTGTCATTTGGGAGGCCATGGCGAATGAACCCATAATCCACATTATTGATTTCCAAATTGCACAAGGTAGTCAGTGGATACCTTTCATCCAGGATCTTTCCAATCGGCCTGGCGGACCACCAGTTCTTCTTCGAATTACAGGCGTGGATGATTCCCAATCAGCACATGCTCGGGGAGGGGGGCTTCAAATTGTAGGACGGAGGCTATCACAGCTGGCCGAGTCGAATGGAATTTGCTTTGAATTTCATGCTGCTGCAATGTCTGGTTGCGAGGTCGAACGCAGTAATCTTAGAATACGACCTGGAGAAGCGTTGGCAGTAAATTTTCCATACGCCTTGCACCACATGCCAGATGAGAGCGTGAGCACACAGAATCATCGAGACCGGCTTCTTAGGTTGGTTAAAAGTCTATCACCGAAAGTAGTAACCATTGTTGAGCAGGAATCCAACACCAACACATCCCCATTCCTTTCACGTTTTATAGAGACACTAGATTATTACACCGCTATGTTCGAATCAATAGATGCAGCTCGTCCGAGGGACGACAAGCAACGAATCAGGGCGGAGCAGCACTGCGTGGCCCGAGACATAGTGAACATGGTAGCCTGTGAGGGGTTCGAAAGGGTAGAACGTCACGAACTCCTTGGGAAGTGGAGGATGAGATTGAGGATGGCTGGATTTAGTCCATATCCAATGAGTTCCTCTGTAACCAGATCCGTCCAGAATCTGTTGAGGGAGTTCAACGAGAACTACAAAGTTCAAGAAGCCGATGGGGCCCTCTACCTTGGATGGAAAAACAGAGCAATGGCAACCTCTTCTGCGTGGAGATGA 1650 46.61 MQASQNRQASSGIHEMYHQSVQEIDPYCLSHFHVLENNVCPDTGSQGNSINFSSCKKQFFTLESFPATADLSACNSPSAVSVLSSRSPFSPQVSQSCSSDQHNSFDNTCGSPQSGCSVTDDDNELKHRLKELEISLLGPESDIEDSCYCSFRGGAHRDASVARWNWNKMVEMIPRLNLQDTLITCAQAIHEADINVATLFMDVLGQMVSVSGDPAQRLGAYLLEGLRARLERSGSAIYKALKCDEPTSSELMSYMSILFQICPYFKFAYTSANVVIWEAMANEPIIHIIDFQIAQGSQWIPFIQDLSNRPGGPPVLLRITGVDDSQSAHARGGGLQIVGRRLSQLAESNGICFEFHAAAMSGCEVERSNLRIRPGEALAVNFPYALHHMPDESVSTQNHRDRLLRLVKSLSPKVVTIVEQESNTNTSPFLSRFIETLDYYTAMFESIDAARPRDDKQRIRAEQHCVARDIVNMVACEGFERVERHELLGKWRMRLRMAGFSPYPMSSSVTRSVQNLLREFNENYKVQEADGALYLGWKNRAMATSSAWR 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17686047 17694134 + MC01g1278 Mch1g1701 676593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1701 549 ProSiteProfiles GRAS family profile. 169 549 IPR005202 -
Mch1g1701 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 138 548 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Mch1g1701 549 Pfam GRAS domain family 179 549 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1701 Mch-Chr1:17686047 Mch2g0480 Mch-Chr2:3477411 5.94E-207 dispersed
Mch1g1701 Mch-Chr1:17686047 Mch5g1847 Mch-Chr5:18703155 6.53E-63 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42784 PF03514 GRAS 7.60E-128 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1701 K27748 - csv:101207883 931.013