Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1783 ATGGTCTGTCCCACCATTTCCCAACTCGACTTCGCAAAATCCTTATGTTCAGACGCCGGAAATTACACCGCCAATTCCACTTACCGGAAAAATCTACAAACCTTACTTTCCTCCCTCTCCTCCGATCCCCGATTGGTAACTTCCGGCTTTTACAATCTCTCCGCCGGAGAGGAACCCGACAAAGTCAACGCCGTCGCCCTCTGCCGCGGCGATCTTTCCGGCGAGATTTGCAAAACTTGCGTCGATGACTCCACTCGGCAGATTCTACAGGTTTGTCCCAATCAGAAGGCGGCGATCGTATGGTACAATCAGTGCATGCTTCGGTTCTCCGACGCCGAAATTTTTGGGGTTATGAACAATTTGGATTCTCAATCGATTTTCAACGGGCGGAAGGCGGCGGACCCGAATCGGTTCCTCGCGGCGGTGACGGATTTGATGGACAAGCTGAGAGAAGCGGCGGCGTCGGGGAACTCGACCCTGAAATTTGCGACGGGAGAGATTCCGGCGAGCAACGAAACTGTGTACGCGCTAGTGCAGTGCACTCCCGACTTGTCGTCAGCGGATTGCGACACGTGTCTCCGTCAACGTGCGGCGCTGATATCTGAGGCCAGCATTGGAGTGAGAATATTCACGGCTAGTTGTGTTTTGAGATACGAGAATTATATTTTCTTTACTCCGCCGGATAATGCCACTCTCTCCCCATCTCCGCTGCCAACTCCGCCGCCACCTCCACCGCCGACTACAGGAAGCAATGGCAAAGGCAACAAAACTACTACCATCGTAATCATCGTTGCATCAATCATTTCTGCAGTCATTCTCATTATTGGCATTTACTTCATTTTGCGAATGAAAAACCGAAAACACAAAAGTTCACCCGGAGAAGTTGAAAGTGCTGCCTTCCACGAAGAAACCGATGAAATTAGCAGCATGGAGACGATTCAATTTGATTTCGACACAATCAAAGTAGCAACTAATGAGTTCTCAGATGAAAATAAGGTCGGAGAAGGTGGATTTGGAGTCGTTTACAAGGGAAGCTTATCCAATGGACAAAACATAGCAGTGAAGAGACTTTCAAGGGATTCAGGCCAAGGAGGTGTGGAGTTCAAAAATGAAGTCCTTGTGATGGCCAAACTTCAACACAGGAACTTAGTCAGGCTGCTAGGGTTTTGCTTGGAGGGAAATGAAAGACTTCTCATCTATGAGTTTCTACCAAATTCCAGCCTTGATCACTTCATATTTGATGTTGTCAAACGGGCACTTTTGGATTGGGAAAGACGGTACAAAATTATAAGTGGTATTGCTCGAGGACTGCTATACCTCCACGAAGATTCTCGGATTCGAATAATTCATCGTGATCTTAAAGCCAGTAATATTTTGTTGGATGGGGAAATGAATTCTAAAATTTCAGACTTTGGCATGGCAAGATTATTTGAATTGGATGAGACTCGAGAGTATGCATACCATGGACAATTCTCTATAAAATCAGATGTGTTTAGCTTTGGTGTTCTGATTCTTGAGATTATAAGCGGCCAGAAAAACAATTCTTTCTGCATCGATGAGAATGCGGAAGATCTTTTAAGCTTTGCATGGAAAAATTGGAGGGAGGGAACACCTGAGAATGTCATAGACGCCATACTTAGTTCAGGTCGAACGACCGAAATGATAAGATGTATTCATATCGGATTATTATGTGTTCAAGAGAATCCAGCAGATCGACCAACAATGGCTTCAATTATTCTAATGTTTAATAGCTTTTCTCTCACTCTCTCCGTACCCTCCCGACCTGCATTCTTTCTGCATAGCAACAACATCTCGTCAAGTGCAGATCATTCCCAAACTGCTCCTCTTCAAGCTTCACAAAATGGAGCTTCCATTACTGATCTTTATCCTCGCTAG 1896 45.57 MVCPTISQLDFAKSLCSDAGNYTANSTYRKNLQTLLSSLSSDPRLVTSGFYNLSAGEEPDKVNAVALCRGDLSGEICKTCVDDSTRQILQVCPNQKAAIVWYNQCMLRFSDAEIFGVMNNLDSQSIFNGRKAADPNRFLAAVTDLMDKLREAAASGNSTLKFATGEIPASNETVYALVQCTPDLSSADCDTCLRQRAALISEASIGVRIFTASCVLRYENYIFFTPPDNATLSPSPLPTPPPPPPPTTGSNGKGNKTTTIVIIVASIISAVILIIGIYFILRMKNRKHKSSPGEVESAAFHEETDEISSMETIQFDFDTIKVATNEFSDENKVGEGGFGVVYKGSLSNGQNIAVKRLSRDSGQGGVEFKNEVLVMAKLQHRNLVRLLGFCLEGNERLLIYEFLPNSSLDHFIFDVVKRALLDWERRYKIISGIARGLLYLHEDSRIRIIHRDLKASNILLDGEMNSKISDFGMARLFELDETREYAYHGQFSIKSDVFSFGVLILEIISGQKNNSFCIDENAEDLLSFAWKNWREGTPENVIDAILSSGRTTEMIRCIHIGLLCVQENPADRPTMASIILMFNSFSLTLSVPSRPAFFLHSNNISSSADHSQTAPLQASQNGASITDLYPR 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18154527 18159154 + MC01g_new0432 Mch1g1783 676675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1783 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1783 631 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 131 598 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Mch1g1783 631 ProSiteProfiles Protein kinase domain profile. 327 586 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1783 631 ProSiteProfiles Gnk2-homologous domain profile. 120 223 IPR002902 -
Mch1g1783 631 Gene3D Transferase(Phosphotransferase) domain 1 403 590 - -
Mch1g1783 631 Gene3D - 121 223 IPR038408 -
Mch1g1783 631 Gene3D - 8 113 IPR038408 -
Mch1g1783 631 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524(InterPro)
Mch1g1783 631 Pfam Protein tyrosine and serine/threonine kinase 330 579 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1783 631 FunFam Cysteine-rich receptor-like protein kinase 10 286 402 - -
Mch1g1783 631 SUPERFAMILY Protein kinase-like (PK-like) 315 611 IPR011009 -
Mch1g1783 631 Gene3D Phosphorylase Kinase; domain 1 300 402 - -
Mch1g1783 631 ProSiteProfiles Gnk2-homologous domain profile. 10 114 IPR002902 -
Mch1g1783 631 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 9 114 - -
Mch1g1783 631 Pfam Salt stress response/antifungal 16 111 IPR002902 -
Mch1g1783 631 Pfam Salt stress response/antifungal 133 221 IPR002902 -
Mch1g1783 631 MobiDBLite consensus disorder prediction 609 631 - -
Mch1g1783 631 SMART serkin_6 327 586 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1783 631 MobiDBLite consensus disorder prediction 232 254 - -
Mch1g1783 631 MobiDBLite consensus disorder prediction 232 249 - -
Mch1g1783 631 FunFam Lectin-domain containing receptor kinase A4.3 403 598 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1783 Mch-Chr1:18154527 Mch1g1785 Mch-Chr1:18168510 2.73E-303 dispersed
Mch1g1783 Mch-Chr1:18154527 Mch1g1784 Mch-Chr1:18160992 1.78E-178 tandem
Mch1g1783 Mch-Chr1:18154527 Mch3g1207 Mch-Chr3:15244862 1.26E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77147 PF07714 PK_Tyr_Ser-Thr 1.30E-38 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1783 - - - 0.0