Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1785 ATGGTTCGTCCCACAGTTTCCCAACTAGAATTCGTAGCATCCGTATGCCCAGAAGCTGGAAATTACACCACCAATTCCACTTACCGGAAAAATCTAAACGCCCTCCTTTCCTCCCTCTACTCCGGTCCGGAGTTGCTAAGTTACGGCTTTTACAATATCTCCGCCGGAGAGGAACCCGACAAAGTCAACGCCGTGGCCCTCTGCATCGGAGATACTTCCGGCAATTTATGCCGGTCCTGCGTCCAAGAATCGAGCCGGAAGATTTTGGAGGTTTGTCCGAACCGGAAGGCGGGAATCGTATGGTACAATCAGTGCATGGTTCGATACTCGGGCGTCGATATTTTCGGGGTTATGGACTATTGGGATTCGTATTCGATTTTCAACGGGCAAACGGCGTCGGACCCGGATGGCTTGTTCCTTAAGGCGGTGAGGAGTTTGATGGAGAGATTAAGAGGAGAGGCTGCGGCGGGGAATTCCACCCGGAAATTGGCGACCGGACAGATTTCTGTCGGGACCGGAACGGTGTACGGGCTTGTGCAGTGCACTCCCGACTTGTCGTCCGCAGATTGCGCCACGTGTGTTGGTGAGCGTGCGGCGGCGATAACTCAGGCGAATTATGGAGCGAGAATATTCACGGCTAGTTGCGTTTTGAGATACGAGAACTATACTTTTTTCTATACACCGCCGGCGCCGGTTAATGCCACTCCCTCTCCATCTATTTTCTCTACACCGCCGGCGCCGGCTAATGCCACTCCCTCTCCATCTACGCTGCCAACCACAGGAAGTAAGGATGGGCCCGATGGCAAAGGAAATACTACTGCTATCATAATCATAGTTGTATCAATACTTTCAGCCGTCATTCTCGTTATTGGCATTTTACGAATGTATAAACGGAAAAGCAAAATACCATCAAATGAAGTTGAAAGCGTTGCCTTCCAAGAAGCAACCGATGAAATTAGTAGAGTGGAGACTATTCAATTTGATTTTCACACGATCAAAGTAGCAACAGATGAGTTCTCAGATGAAAATAAACTCGGACAAGGTGGATTTGGAGTTGTCTACAAGGGAAGGTTGTCAAATGGACAGAACATAGCAGTGAAGAGACTTTCGAGAGATTCAGGACAAGGAAATGTGGAATTCAGAAATGAAGTCCTTATGCTGGCCAAACTTCAACACAGGAACTTAGTTAGGTTGTTAGGATTTTGCTTGGAGGGAAATGAAAGACTTCTCATCTATGAGTTTCTACCCAATGGCAGCCTTGATCACTTCATATTTGATCCGGTGAAAAGAACAATTTTGGATTGGAAAAGACGATATAAAATTATAAGCGGCATTGCTCGAGGACTATTATACCTCCATGAAGATTCTCGTATTCGAATCATTCATCGTGATCTCAAAGCTAGCAATATTTTGTTGGATGGAAAGATGAATCCTAAAATTGCGGACTTTGGTATGGCAAGATTGTTCGAAGTGGACGAGACTCGAGGTCAAACCAATAGAATTGTGGGAACTTATGGTTACATGGCTCCAGAATATGCATACCACGGACAATTCTCATCAAAATCAGATGTGTTTAGTTTTGGAGTTCTAATTCTTGAGATTATAAGTGGTCAAACAGTTCATAGTTTTGACAAGGGAGGGGAGAATGAAAATCTTTTAAGCTTTGCATGGAAAAATTGGAAGGCTGGAACACCTGAAAATGTAATAGATATGATATCAAGTTCAAGTTCGAGCATTGAAATGATAAGATGTATTCATATTGGATTACTATGTGTTCAAGCAAATGTAGCAGATCGACCTACCATGACTTCAGTAGTTATGATGCTTAATAGTTTCTCTCTCACACTTTCTCTACCCTCCCAACCTGCGTTCTTCGTACACAGCAACTACATCTTGTCAAATGCAAATGATTCCCAAAAAATTCCTCTTCAGGCCTCAGAAAATGCAGTTTCCATTTCTGACTTTTATCCTCGTTAG 1977 44.26 MVRPTVSQLEFVASVCPEAGNYTTNSTYRKNLNALLSSLYSGPELLSYGFYNISAGEEPDKVNAVALCIGDTSGNLCRSCVQESSRKILEVCPNRKAGIVWYNQCMVRYSGVDIFGVMDYWDSYSIFNGQTASDPDGLFLKAVRSLMERLRGEAAAGNSTRKLATGQISVGTGTVYGLVQCTPDLSSADCATCVGERAAAITQANYGARIFTASCVLRYENYTFFYTPPAPVNATPSPSIFSTPPAPANATPSPSTLPTTGSKDGPDGKGNTTAIIIIVVSILSAVILVIGILRMYKRKSKIPSNEVESVAFQEATDEISRVETIQFDFHTIKVATDEFSDENKLGQGGFGVVYKGRLSNGQNIAVKRLSRDSGQGNVEFRNEVLMLAKLQHRNLVRLLGFCLEGNERLLIYEFLPNGSLDHFIFDPVKRTILDWKRRYKIISGIARGLLYLHEDSRIRIIHRDLKASNILLDGKMNPKIADFGMARLFEVDETRGQTNRIVGTYGYMAPEYAYHGQFSSKSDVFSFGVLILEIISGQTVHSFDKGGENENLLSFAWKNWKAGTPENVIDMISSSSSSIEMIRCIHIGLLCVQANVADRPTMTSVVMMLNSFSLTLSLPSQPAFFVHSNYILSNANDSQKIPLQASENAVSISDFYPR 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18168510 18171712 + MC01g_new0434 Mch1g1785 676677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1785 658 FunFam Cysteine-rich receptor-like protein kinase 28 415 617 - -
Mch1g1785 658 Pfam Salt stress response/antifungal 134 222 IPR002902 -
Mch1g1785 658 Pfam Salt stress response/antifungal 16 110 IPR002902 -
Mch1g1785 658 MobiDBLite consensus disorder prediction 253 267 - -
Mch1g1785 658 SUPERFAMILY Protein kinase-like (PK-like) 327 642 IPR011009 -
Mch1g1785 658 ProSiteProfiles Protein kinase domain profile. 339 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1785 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 9 113 - -
Mch1g1785 658 MobiDBLite consensus disorder prediction 237 252 - -
Mch1g1785 658 MobiDBLite consensus disorder prediction 237 267 - -
Mch1g1785 658 ProSiteProfiles Gnk2-homologous domain profile. 10 114 IPR002902 -
Mch1g1785 658 FunFam Cysteine-rich receptor-like protein kinase 10 300 414 - -
Mch1g1785 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 165 625 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Mch1g1785 658 SMART serkin_6 339 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1785 658 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524(InterPro)
Mch1g1785 658 CDD STKc_IRAK 345 610 - -
Mch1g1785 658 Gene3D Phosphorylase Kinase; domain 1 301 414 - -
Mch1g1785 658 Gene3D Transferase(Phosphotransferase) domain 1 415 617 - -
Mch1g1785 658 Gene3D - 122 224 IPR038408 -
Mch1g1785 658 Gene3D - 8 112 IPR038408 -
Mch1g1785 658 ProSiteProfiles Gnk2-homologous domain profile. 120 224 IPR002902 -
Mch1g1785 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1785 658 Pfam Protein tyrosine and serine/threonine kinase 342 607 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1783 Mch-Chr1:18154527 Mch1g1785 Mch-Chr1:18168510 2.73E-303 dispersed
Mch1g1785 Mch-Chr1:18168510 Mch1g1788 Mch-Chr1:18182049 8.07E-223 dispersed
Mch1g1784 Mch-Chr1:18160992 Mch1g1785 Mch-Chr1:18168510 1.29E-189 tandem
Mch1g1785 Mch-Chr1:18168510 Mch1g1786 Mch-Chr1:18173341 5.60E-246 tandem
Mch1g1785 Mch-Chr1:18168510 Mch2g0661 Mch-Chr2:4526660 5.19E-29 wgd
Mch1g1785 Mch-Chr1:18168510 Mch4g0220 Mch-Chr4:1424341 1.22E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77149 PF00069 Pkinase 1.10E-48 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1785 - - - 0.0