Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1786 ATGGAGATGGGAACTTCAAAAAACCCTCTCTTCCTTTGCTTCATTCTCATATTCATGGTCTCCTCCACCATTTCCCAAGTGGAAGTCGTGACCCACTTATGTTCAAACAGAGGCAACTACACCAGCGACAGCGTTTACAAGCAAAATCTTGCCACCGCACTTTCCTCCATCGTCTCAGACACCCAAATCGATTACGGATTTTACAATTTCACAGCCGGACAGGAACCCGACAAGGTGCACGCCGTCGCCCTTTGCCTGGGCGTTGTGTCGGTGGAGAAATGCAGGAGCTGTCTCAATGCGTCCACTCGAAGGATTCTGGAGGATTGTCCGAACCAGAAGGAGGCAATCGGATGGTACACCGATTGTATGATTCGTTACTCAAACAGGACCATTTTTGGGGTTCGCAACGACCGAGTGCTCGAGCCAGTTTTCATCTCCGGTCAGAACGCATCGGACATTGATGGCTACACTCAGTCACTCAGCGATTTGTTGCAAAGACTGAGAAATGAGGCTGCGTCCGGGGATTCTAGACGCAAATCTGCGGTGGGAGAAATTGGTGCACCAAAGTTGGGGACCATATTTGGGCATCTTCAGTGTACTCCCGATTTGTCCTCTGTGGATTGTAATAATTGTCTTGTTACGGCTGCTGATCGTGTTCCGACTGGAAGTACAGGAACCAGAATCTTTTTGACGAGCTGTTATTTGAGATATGAGAACCGTCTTTTCTACGACCCCTCGCCGCCGCCGCCGCCCCCTGCCGGTGGCGTTCCCTCCCCGCCCCTGTCGCCGCCTCCGACACCAGACAATAATAGCAATACTGCTAGAACTGTTATAATCGTTGTGGTGTCCATCGTTTCTGCTATCATTCTCGTCGTTGGCATTTTCATCATTTTGAGATTGAGGAAACGAAAGCACAAAACACCAGAAGAAAAATTTGATGGTGTTTCTTTTGGAGACACCACTGGTGAAATCAGCAGTGTAGAGACGATTCAATATGATTTTGACACCATTAAAGTTGCAACAAATGACTTCTCAACTGAAAACAAGCTTGGACAGGGTGGATTTGGAGCTGTCTACAGGGGTAAGCTGCCTAATGGACAGCAGATAGCAGTGAAGAGACTTGCAAATAATTCACAGCAAGGAGATCTTGAATTCAAAAATGAAGTTCTTTTGGTGGTCAAGCTTCAACACCGAAACTTGGTTAGGCTGTTGGGATTCTGCTTACAAAAAACTGAGAGACTTCTCATATATGAATTTGTGCCGAATGCAAGCCTTGACCACTTCATATTTGATTTTGAAAAGCGGTCACAATTAGATTGGGATAGACGATTCAAAATCATAAATGGCATTGCACGAGGAATGCTATACCTTCATGAGGATTCTCGTCTTCGTATTGTACACCGTGATCTCAAAGCTAGCAATATTTTGTTGGATGAGGAAATGAATCCAAAGATTGCAGATTTTGGTATGGCAAGATTGTTTGAGGTGGATGAGACTCAAGGCAATACAAGTAGAATTGTGGGAACTTATGGCTATATGGCTCCAGAGTATTTAATGCATGGACAATTTTCAGTGAAATCAGATGTCTTCAGTTTTGGTGTTTTGGTTCTTGAAATTGTCAGTGGCCAGAAAAATAATTGTTTTCGTAATGGAGAAAAAGTAGAAGATCTCTCTAGCTGTGCATGGAAAAATTGGAGAGCAGGAACAACTACAAATGTCATAGATCAAACACTTAGTGTTGGTTCAAAGATTGAAATGATGAGATGCATTCACATCGGACTATTGTGTGTTCAAGAGAATGCAGCAGATCGACCAACAATGGCTTCGGTGGTTCTAATGCTTAGTAGCTTCTCTCTCACTCTTCCTGTGCCTGCAGAACCTGCATTCTTCATGCATAGTAACATTGATGAGTCCAACACATTGCCAAAGTCAGATCTCTGGTTGGAAACGATTCAATCTAGTCATTATGAAAATACACCCGTTCAAGCTTTGAAGAATGACCCTTCCATTAGCGAGCTCCACCCTCGCTAG 2031 44.41 MEMGTSKNPLFLCFILIFMVSSTISQVEVVTHLCSNRGNYTSDSVYKQNLATALSSIVSDTQIDYGFYNFTAGQEPDKVHAVALCLGVVSVEKCRSCLNASTRRILEDCPNQKEAIGWYTDCMIRYSNRTIFGVRNDRVLEPVFISGQNASDIDGYTQSLSDLLQRLRNEAASGDSRRKSAVGEIGAPKLGTIFGHLQCTPDLSSVDCNNCLVTAADRVPTGSTGTRIFLTSCYLRYENRLFYDPSPPPPPPAGGVPSPPLSPPPTPDNNSNTARTVIIVVVSIVSAIILVVGIFIILRLRKRKHKTPEEKFDGVSFGDTTGEISSVETIQYDFDTIKVATNDFSTENKLGQGGFGAVYRGKLPNGQQIAVKRLANNSQQGDLEFKNEVLLVVKLQHRNLVRLLGFCLQKTERLLIYEFVPNASLDHFIFDFEKRSQLDWDRRFKIINGIARGMLYLHEDSRLRIVHRDLKASNILLDEEMNPKIADFGMARLFEVDETQGNTSRIVGTYGYMAPEYLMHGQFSVKSDVFSFGVLVLEIVSGQKNNCFRNGEKVEDLSSCAWKNWRAGTTTNVIDQTLSVGSKIEMMRCIHIGLLCVQENAADRPTMASVVLMLSSFSLTLPVPAEPAFFMHSNIDESNTLPKSDLWLETIQSSHYENTPVQALKNDPSISELHPR 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18173341 18176834 + MC01g_new0435 Mch1g1786 676678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1786 676 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 131 - -
Mch1g1786 676 ProSiteProfiles Protein kinase domain profile. 344 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1786 676 Pfam Salt stress response/antifungal 149 240 IPR002902 -
Mch1g1786 676 Pfam Salt stress response/antifungal 34 129 IPR002902 -
Mch1g1786 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1786 676 FunFam Cysteine-rich receptor-like protein kinase 28 420 622 - -
Mch1g1786 676 Gene3D Transferase(Phosphotransferase) domain 1 420 621 - -
Mch1g1786 676 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Mch1g1786 676 Gene3D Phosphorylase Kinase; domain 1 316 419 - -
Mch1g1786 676 ProSiteProfiles Gnk2-homologous domain profile. 138 242 IPR002902 -
Mch1g1786 676 SMART serkin_6 344 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1786 676 FunFam Cysteine-rich receptor-like protein kinase 10 303 419 - -
Mch1g1786 676 SUPERFAMILY Protein kinase-like (PK-like) 332 654 IPR011009 -
Mch1g1786 676 MobiDBLite consensus disorder prediction 244 269 - -
Mch1g1786 676 Pfam Protein tyrosine and serine/threonine kinase 346 611 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1786 676 Gene3D - 140 242 IPR038408 -
Mch1g1786 676 Gene3D - 26 130 IPR038408 -
Mch1g1786 676 CDD STKc_IRAK 350 614 - -
Mch1g1786 676 MobiDBLite consensus disorder prediction 244 267 - -
Mch1g1786 676 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524(InterPro)
Mch1g1786 676 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 151 630 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1784 Mch-Chr1:18160992 Mch1g1786 Mch-Chr1:18173341 3.57E-118 dispersed
Mch1g1786 Mch-Chr1:18173341 Mch1g1788 Mch-Chr1:18182049 4.12E-278 dispersed
Mch1g1794 Mch-Chr1:18206406 Mch1g1786 Mch-Chr1:18173341 5.92E-50 dispersed
Mch1g1785 Mch-Chr1:18168510 Mch1g1786 Mch-Chr1:18173341 5.60E-246 tandem
Mch1g1786 Mch-Chr1:18173341 Mch1g1787 Mch-Chr1:18179149 1.09E-107 tandem
Mch9g0055 Mch-Chr9:443241 Mch1g1786 Mch-Chr1:18173341 1.43E-231 transposed
Mch1g1786 Mch-Chr1:18173341 Mch2g0640 Mch-Chr2:4391070 6.85E-15 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77150 PF07714 PK_Tyr_Ser-Thr 1.00E-49 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1786 - - - 0.0