Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1871 ATGGACGAAGAGGCTAATTCTTGGCTGAGGAGAACAAAATTTTCTCACACTGTTTACCATCGATGGGATTCCTTAAGATTGAATCCTGTTCCTTTCATCGTCGAGCCACCTCGCAATTCTGGCTTGAAATCGAGGCCTCAATCAGCTTCGTCTGCTCAGAAACCGGATTCTGATATTTCGAAGATACAGAGAAATTTCACGGCGCATAAGCAGAGGTCTCTGTCTCCCCTCCTCCAGTCCAACCTCTCCGAGGTTTTCAAGGAAGCGAAATCCGCCAGTAAGCGATTCGCTACTCCAACTCCTCGGCTTAGAGAACGGACTAGGGAATTCAAGAACAAGCTATTCCACAGGGATCCTCAAGATTCAAAACCGCCAAATTTCAAGCCATCGTTGAATACCAGTCCCCTGAAGCACTTGGCTTCGGGAAAAGGTGGCAGCGACAAGTCAAAGTTCCGGAAGGACTCATCCTGGACCAAATATTTCGAGTCCAGTGGTGGAAGAGTCACCGCAGTAGAAACAGAAGTTGAAACTGAAGACGATTCGAGTGTCGATCTCTCTAAGTTGTTTCTTGGCTTGAGGTTTGCTCATGGAGCTCACAGTCGTCTCTATCATGGAAAATACAACGATGAACCTGTTGCTGTTAAGATTATCAGAGTGCCCGAGGACGACGAAAATGGAGCGCTTGCTGCTCGATTAGAGAAGCAATTCGCCAGAGAAGTTACCCTTTTATCTCGTCTTGATCATCCGAATGTAATAAAGTTTGTAGCTGCCTGTAGGAAGCCACCAGTTTTTTGTGTCATTACTGAATATTTGTCTCAAGGTTCATTAAGGGCATACTTACATAAACTCGAGCACCAATCCCTTCCTTTGCAAAAACTGATAGCAATTGCTTTAGATGTTGCTCGTGGAATGGAATACATTCACGCACAGGGCATAATTCACCGGGACCTTAAGCCTGAGAATGTTCTTATCGACGAGGACTTCCACCTGAAAGTTGCAGATTTTGGCATAGCTTGTCCCGAGGCGTATTTTGACCCGTTAGCTGATGATCCCGGAACTTATCGATGGATGGCACCAGAGATGATCAAACACAAACCATATGGGCGAAAAGTCGATGTGTACAGCTTTGGACTTATGTTGTGGGAAATGGTGGCCGGCGCAATTCCTTACGAGGATATGACTCCCATTCAAGCAGCATTTGCTGTTGTCAATAAGAATCTTAGACCTGTTATCTCAAGTGATTGTCCCTTGGCGATGCGAGCTTTAATAGAGCAATGTTGGTCCCTACAACCAGACAAGAGACCCGATTTCTGGCAGGTTGTGAAGGTATTGGAGCAATTCGAGTCTTCGCTTGCCCTGGACGGGAGTCTGAATTTAGTAGAGAACCCTCTGTCTAGTTTCCAAGATCATAAGAAAGGGCTCCGCCATTGGATTCAAAAGCTTGGCCCTCTGCACCCAGAAGCCTCGCCTGTGCCCAAACCAAAATTCACATAA 1494 46.18 MDEEANSWLRRTKFSHTVYHRWDSLRLNPVPFIVEPPRNSGLKSRPQSASSAQKPDSDISKIQRNFTAHKQRSLSPLLQSNLSEVFKEAKSASKRFATPTPRLRERTREFKNKLFHRDPQDSKPPNFKPSLNTSPLKHLASGKGGSDKSKFRKDSSWTKYFESSGGRVTAVETEVETEDDSSVDLSKLFLGLRFAHGAHSRLYHGKYNDEPVAVKIIRVPEDDENGALAARLEKQFAREVTLLSRLDHPNVIKFVAACRKPPVFCVITEYLSQGSLRAYLHKLEHQSLPLQKLIAIALDVARGMEYIHAQGIIHRDLKPENVLIDEDFHLKVADFGIACPEAYFDPLADDPGTYRWMAPEMIKHKPYGRKVDVYSFGLMLWEMVAGAIPYEDMTPIQAAFAVVNKNLRPVISSDCPLAMRALIEQCWSLQPDKRPDFWQVVKVLEQFESSLALDGSLNLVENPLSSFQDHKKGLRHWIQKLGPLHPEASPVPKPKFT 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18761058 18764778 - MC01g1415 Mch1g1871 676763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1871 497 ProSiteProfiles Protein kinase domain profile. 188 448 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1871 497 Gene3D Phosphorylase Kinase; domain 1 177 272 - -
Mch1g1871 497 MobiDBLite consensus disorder prediction 125 139 - -
Mch1g1871 497 CDD STKc_MAP3K-like 195 444 - -
Mch1g1871 497 SMART serkin_6 188 447 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g1871 497 FunFam serine/threonine-protein kinase HT1 273 465 - -
Mch1g1871 497 MobiDBLite consensus disorder prediction 114 152 - -
Mch1g1871 497 PANTHER SERINE-THREONINE PROTEIN KINASE 68 446 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch1g1871 497 MobiDBLite consensus disorder prediction 37 59 - -
Mch1g1871 497 Pfam Protein tyrosine and serine/threonine kinase 195 444 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1871 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1871 497 Gene3D Transferase(Phosphotransferase) domain 1 273 472 - -
Mch1g1871 497 MobiDBLite consensus disorder prediction 41 59 - -
Mch1g1871 497 PRINTS Tyrosine kinase catalytic domain signature 306 324 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1871 497 PRINTS Tyrosine kinase catalytic domain signature 371 393 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1871 497 PRINTS Tyrosine kinase catalytic domain signature 415 437 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1871 497 PRINTS Tyrosine kinase catalytic domain signature 268 281 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1871 497 PRINTS Tyrosine kinase catalytic domain signature 352 362 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g1871 497 SUPERFAMILY Protein kinase-like (PK-like) 175 444 IPR011009 -
Mch1g1871 497 FunFam Kinase suppressor of Ras 1 177 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1871 Mch-Chr1:18761058 Mch3g1453 Mch-Chr3:16850732 4.62E-112 dispersed
Mch5g1306 Mch-Chr5:13906182 Mch1g1871 Mch-Chr1:18761058 1.50E-38 transposed
Mch1g1871 Mch-Chr1:18761058 Mch3g1125 Mch-Chr3:14599627 6.08E-221 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77160 PF07714 PK_Tyr_Ser-Thr 1.60E-59 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1871 - - - 0.0