Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1894 ATGGAAACGATAAGGAGATATATGAACAGAAGCTTGTGCCTTCACGATCTGACAACTCAGCTCAATCCCGATAAGTGGACCCCACCACATCCCCACTCTCATCCACACTTTCTCTATCTTATCTTCCACCACGTCGCCCTCCCACTCTTCAACGCTCCTGATTCTGACACAAAACCAGTTTCACTTTTCCCACTCTACTCCCGGACGTACCCGATCTACCCGTACAATAATACAGACAGGAAAAACAACTACTGCCAGAAGTTTGGTCACGATATCATCATCGGCGCACAGAATAAAGCCTCGCCCCACCCGACGAATCCCCATTTGCCGCTCTCTTTCTCTGCTTTTACGGTTATGGAGTCGCAGCTTCTCTCACGCGCCACTTCCTTCGCCGGCGGCATTCTCAGCCTCCGAAAGTCCCCGAGAGAGAGCACCACCAGCCATGTCTGCCTCGTCCAGGCCAGGCCGATCGCCGAGGGAGCGAATCTGATTTGGGGAAGACAACTGCGGCCGTCGCTGCTTGTATCTCCACCGAGTCTTGTCGCGGTCCGGAGAGAGACTATTCGCCTAGCGGCGGCTTCTTCTTCCCCCGCCGAAGGCAGCGATTCCGCCGGGGAAGCGAAGGTTGCTCCGGTGGGATTCATCGAGAAGTATCCCGCGCTCGTCACCGGATTCTTCTTCTTCATGTGGTACTTCTTGAACGTGATCTTCAACATCCTCAACAAGAAGATCTACAATTACTTCCCCTACCCTTATTTTGTGTCGGTGATCCATTTACTGGTTGGGGTGGTGTACTGTCTGATAAGCTGGACCGTGGGTCTTCCTAAGCGCGCACCTATCGACTCAACCCTCCTGAAGTTGCTGATCCCTGTAGCTTTCTGTCATGCACTTGGCCACGTCACCAGCAACGTCTCCTTCGCAGCTGTTGCTGTCTCTTTCACACACACGATCAAAGCTCTGGAACCGTTCTTTAACGCTGCGGCTTCTCAGTTCATTCTGGGGCAGTCCATTCCCATTACCTTATGGCTATCATTGGCTCCTGTTGTCCTCGGTGTGTCGATGGCATCCTTGACTGAGCTTTCATTCAACTGGACTGGCTTTATTAGTGCTATGATTTCCAATATCTCTTTTACCTACAGAAGTATTTACTCGAAGAAAGCCATGACTGACATGGACAGCACCAATGTCTACGCCTATATTTCCATCATCGCTCTCCTCTTCTGCCTTCCTCCTGCTATAATAGTGGAGGGGCCTCAACTGCTGAAATTTGGTTTCAATGATGCCATAGCTAAAGTTGGTCTAACCAAATTCGTCTCAGATCTCTTCTGGGTTGGAATGTTTTATCACCTTTACAATCAGTTAGCAACCAACACCCTGGAGAGGGTGGCACCGCTTACTCATGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGCTTCTCCATCATTGTCTTTGGTAACAAAATTTCAACACAGACTGGTATTGGAACAAGCATTGCAATTGCAGGAGTCGCACTTTACTCTTACATCAAGGCAAAGATGGAAGAAGAGAAACGACGAACAAAAGTGGCTTGA 1578 49.56 METIRRYMNRSLCLHDLTTQLNPDKWTPPHPHSHPHFLYLIFHHVALPLFNAPDSDTKPVSLFPLYSRTYPIYPYNNTDRKNNYCQKFGHDIIIGAQNKASPHPTNPHLPLSFSAFTVMESQLLSRATSFAGGILSLRKSPRESTTSHVCLVQARPIAEGANLIWGRQLRPSLLVSPPSLVAVRRETIRLAAASSSPAEGSDSAGEAKVAPVGFIEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLISWTVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQSIPITLWLSLAPVVLGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCLPPAIIVEGPQLLKFGFNDAIAKVGLTKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVALYSYIKAKMEEEKRRTKVA 525
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 18908375 18914262 - MC01g1437 Mch1g1894 676786
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1894 525 Pfam Triose-phosphate Transporter family 222 509 IPR004853 -
Mch1g1894 525 PANTHER SOLUTE CARRIER FAMILY 35 214 513 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Mch1g1894 525 SUPERFAMILY Multidrug resistance efflux transporter EmrE 265 358 - -
Mch1g1894 525 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 221 519 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Mch1g1894 525 SUPERFAMILY Multidrug resistance efflux transporter EmrE 438 510 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1168 Mch-Chr11:8215615 Mch1g1894 Mch-Chr1:18908375 2.70E-74 dispersed
Mch1g1894 Mch-Chr1:18908375 Mch9g2077 Mch-Chr9:21833395 1.75E-187 dispersed
Mch1g1894 Mch-Chr1:18908375 Mch1g1770 Mch-Chr1:18083541 2.43E-76 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1894 K15283 - csv:101220728 711.064