Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g1906 ATGGGAAAGCATTCGAAGACCAGTTGCAAGTCGGCTTCCCACAAGCTCTTTAAGGATAAGGCAAAGAACCGAGTCGATGATCTGCAAAGCATATTTGTAGATTTGCAATATGCAAGGAAAGAGAGCCGCACAGTTGATGTGGCAGTTCTTGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAAGCCGAGCTGAACGAGCCCTCTCCAGCTTCCTCTTTGCAACAAGGTGGAAGTCTTGGGTCATTTTCATCAGACATTTGTCGATTGTTACAACTTTGTGAGGAGGATGATGATGCATCTAGTCCATTAGCTGCTCCTAAGCCTGAGCCTAATGAACAAAATCTGCAGGTTGGAGATACTACGGCACTTCAAGAGGTTCTTCATATTCTTAACCTGCTTCAGGGATTTCACATGAATCGTGTACACCAAGAACCAAGCTTCTCTCTAGTCGATCAATGCAAGAACTCCCCTTCAGGAGTTCATGGTATGGCTATGAATAACTTGGAAGGACCTACACATCTGGAGTGTCATCAGTTTGATTTACATCAAGGAATTGAGCACAACTTTTACTCTTTCCTTAATGGTAGAGGTTTGTGTGGTGAGGGTGCAATTTCTCATGTTTCTAGCTACTGTCCTAGCATATGCCCTCCCCCTGCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGATTGCCCACGACCTGCCCAAGGGTTGGATTGGTGTGAGGACTACTGTAGTAGTTTTCATGCTGCCTTGGCCTTGAATGAAGGCCCTCCTGGAATGGGTCCAGTTTTACGACCTGGTGGCATTGGTCTGAAGGATGGTTTGCTTTTTGCTGCTCTTAGTGCAAAGTCACAAGGAAAAGATGTTGGCATCCCTGAATGTGAGGGAGCTGCCACTGCAAAATCCCCCTGGAATGCTCCTGAGCTTTTTGATCTGTCAATATTGGAGGGTGAGATGATTCGGGAGTGGCTTTTCTTTGATAAACCTCGCCGAGCATTTGAAAGTGGGAATAGGAAGCAGAGATCATTGCCTGATTACAGTGGACGTGGTTGGCACGAGTCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTCAAGAGATCTTATTACATGGATCCTCAGCCATTGAACCACTTTGAGTGGCATCTTTATGAATATGAAATTAACAAGTATGATGCCTGTGCTTTGTATAGATTGGAGCTGAAACTTGTCGATGGGAAAAAAAGTTCTAAGGCAAAGGTAACAAATGATTCAGTTGCTGATTTACAGAGGCAGATGGGGAGACTAACTGCAGAGTTTCCTGATAATAAACGCTATGTGAAGGGGAGGACCAAAATTAATACTAGAGTTGGTGTTGGAAATATGTACCCCGCAGTAAATAGAGCCCTGCCACCAAATGGAACGTATGACTATATGCTTCATGCACAATATGATTACCTGGTGGAGAATTTGAGTGAATATTACCTGACATAG 1479 44.49 MGKHSKTSCKSASHKLFKDKAKNRVDDLQSIFVDLQYARKESRTVDVAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSSDICRLLQLCEEDDDASSPLAAPKPEPNEQNLQVGDTTALQEVLHILNLLQGFHMNRVHQEPSFSLVDQCKNSPSGVHGMAMNNLEGPTHLECHQFDLHQGIEHNFYSFLNGRGLCGEGAISHVSSYCPSICPPPAAFLGPKCALWDCPRPAQGLDWCEDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKSQGKDVGIPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKKSSKAKVTNDSVADLQRQMGRLTAEFPDNKRYVKGRTKINTRVGVGNMYPAVNRALPPNGTYDYMLHAQYDYLVENLSEYYLT 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18986932 18990860 + MC01g1447 Mch1g1906 676798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g1906 492 PANTHER TRANSCRIPTION FACTOR VOZ1 1 490 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(InterPro)|GO:0048578(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1906 Mch-Chr1:18986932 Mch2g0512 Mch-Chr2:3654993 1.16E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42807 None None None None Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g1906 - - - 0.0