Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g2097 AATTCCCTTTTCATTAACTGTGGCTCAAGTTCAGATGTTACTGTTGATGGTCGGAAATGGATCGGCGACCTGGCCTCCGAGGGAAACTTTTCCGTCGGCGATCTTGGTGCTAATATTAACGCCTCCACAGCCAGTCTAGGCGGCGATTCAGTCTTTGAGCCACTGTATAGAACTGCTCGGATTTTTACCAATTCCCTAAACTATACTATCAAAGGCCTTTGGGGTAATCATTTTGTCCGGCTCCATTTCTGCCCCTTCCCCTTTGAAAACTTCAATGTGAACGGATCATCATTTTCTGTCTCAGCTAACGGTCTTGGACTGGTTTCAGAGTTGAGCGTTCCCAATGAGATTGCATATAAGAATATGGAGTTTCAGCGTTCTGGGGTCAATTCCAGTTCATTCTATTTGATTAAAGAGTTCATTGTTGCTGTCAATTCGGAATCATTCGTTATCGAGTTCTCCCCTTCTGGAGGATCATTTGGGTTCATCAATGCGGTTGAAGTTATCCCCCTGGTGGATGAGCTCTTTGCAGGTTTGATTGATAAGGTGGGTGGAAATGCTGTTGGTTTGAATGTGAGTGAAAGGGGAACTGAAACTATGTACAGATTGAACGTTGGAGGTGAGGAGATCAAACCCACTCAAGATTCAAATCTTTGGAGAAGATGGGAAGTGGATTCGAGTTATATGATCACAGCAAATGCTGGGTCGGAGATACATAACAGTTCTAATATAACATATGCTTCCCTGAATGACTCCATTGTAGCTCCTCTACCTGTGTATGAAACAGCCAGAACGATGTCCGAGACCGAAGTACTCGAGAAAAGGTTCAACATGTCGTGGAAATTCGAAGTTCATCCTGGTTTCGAGTACTTGATCCGATTGCATTTCTGTGAGCTGCTATATGATAAGGCAAGGGAGAGGGTTTTCAAGATATACATAAACAACAGGACTGCAGTGGAAAGTTTTGATGTGTTTGTTCGAGCAGGGGGAATGAACAAAGCACATCACGTGGATTTTCTTGAACCAAAATCATCTAAAATCAACACCCTTTGGATTCAATTAGGCCCTGATACAGCTGCGGGTGCTGCAGGAACTGACGCTCTCTTGAATGGTCTGGAGATCTTTAAGCTGAGTCAGAATGGGAATCTTGCATACATTGACAGGTTTAATGCCTTAGAGGAATCGACGGGAAACTCGAAATCGCAAATTCTTTGGATAGGCATTGGAGCAGGTTTAGCATCTGTTGTTTTTCTTTCTGTTATTACCATTCTCGTCATCTACTTCTGCAGAATTCGGAGAAGGAATTTCACTAAGAAGAACTCTTCAAGGTGGAGAACAGCATCCAGTCATGGGGCAACTATGACCAACACCTATGCCAGAGGGTCCTTAGGCGGAGGCCAAAGTCAGTATGGGACGATGCCATCTATCAGAGTTGGTAAATGGTTTACATTGGCAGAGATTCTTTCAGCAACTGACAACTTTGATGAAGCTCTGCTGATTGGAGTTGGAGGTTTTGGTAAGGTCTACAGAGGGGAGATTGATGATGGTACTCTTGTGGCAATCAAGAGAGCCAACCCGCAGTCTCAGCAAGGACTTGCTGAGTTCGAGACCGAAATCGAAATGCTTTCTAAACTCAGGCATAGACATCTGGTCTCCATGATCGGCTTTTGTGACGAGCAGAAGGAAATGATCTTGGTTTACGAGTACATGGCGAATGGCACGCTGAGAAGCCATCTCTTTGGGAGTGATCTCCCACCTCTGACTTGGAAGCAGAGGTTGGAAGTGTGCATTGGTGCAGCCAGGGGACTCCACTACCTTCACACAGGAGCTGAGAGAGGAATCATCCACAGAGATGTGAAGACAACCAACATACTCTTGGATGAGAAATTTGTTGCCAAAATGTCTGATTTTGGTCTTTCAAAAACAGGTCCTTCATTGGATCATACTCATGTTAGTACTGCAGTTAAGGGCAGCTTCGGCTATCTCGACCCGGAGTATTTCAGGCGCCAACAGCTGAGTGAAAAATCAGATGTCTATTCCTTTGGTGTGGTATTGTTAGAAGTTGTTTGTGCACGAGCTGTTATAAACCCAAGTTTACCAAAGGATCAGATAAATCTTGCAGAATGGGCAATGAGATGGCAGCGCAAAAAGTTGCTGCACACCATCATCGACCCACATCTCAAAGGCAAATATTGTCCTGAATCTCTGAAAACATTTGGGGAGATGGCAGAAAAATGCCTTGCTGATGAGGGGAAGATTCGTCCAACAATGGGGGAAGTTCTGTGGCACCTAGAATATGCTCTGCAACTCCATGATGCT 2319 44.63 NSLFINCGSSSDVTVDGRKWIGDLASEGNFSVGDLGANINASTASLGGDSVFEPLYRTARIFTNSLNYTIKGLWGNHFVRLHFCPFPFENFNVNGSSFSVSANGLGLVSELSVPNEIAYKNMEFQRSGVNSSSFYLIKEFIVAVNSESFVIEFSPSGGSFGFINAVEVIPLVDELFAGLIDKVGGNAVGLNVSERGTETMYRLNVGGEEIKPTQDSNLWRRWEVDSSYMITANAGSEIHNSSNITYASLNDSIVAPLPVYETARTMSETEVLEKRFNMSWKFEVHPGFEYLIRLHFCELLYDKARERVFKIYINNRTAVESFDVFVRAGGMNKAHHVDFLEPKSSKINTLWIQLGPDTAAGAAGTDALLNGLEIFKLSQNGNLAYIDRFNALEESTGNSKSQILWIGIGAGLASVVFLSVITILVIYFCRIRRRNFTKKNSSRWRTASSHGATMTNTYARGSLGGGQSQYGTMPSIRVGKWFTLAEILSATDNFDEALLIGVGGFGKVYRGEIDDGTLVAIKRANPQSQQGLAEFETEIEMLSKLRHRHLVSMIGFCDEQKEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDEKFVAKMSDFGLSKTGPSLDHTHVSTAVKGSFGYLDPEYFRRQQLSEKSDVYSFGVVLLEVVCARAVINPSLPKDQINLAEWAMRWQRKKLLHTIIDPHLKGKYCPESLKTFGEMAEKCLADEGKIRPTMGEVLWHLEYALQLHDA 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20336445 20338763 + MC01g1613 Mch1g2097 676989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g2097 773 CDD STKc_IRAK 500 765 - -
Mch1g2097 773 PANTHER OS07G0166700 PROTEIN 482 771 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Mch1g2097 773 SMART serkin_6 494 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g2097 773 FunFam Receptor-like protein kinase FERONIA 570 773 - -
Mch1g2097 773 SUPERFAMILY Protein kinase-like (PK-like) 471 766 IPR011009 -
Mch1g2097 773 ProSiteProfiles Protein kinase domain profile. 494 766 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch1g2097 773 FunFam receptor-like protein kinase FERONIA 463 569 - -
Mch1g2097 773 Gene3D Transferase(Phosphotransferase) domain 1 570 772 - -
Mch1g2097 773 Pfam Malectin-like domain 5 376 IPR024788 -
Mch1g2097 773 FunFam Receptor-like protein kinase FERONIA 196 379 - -
Mch1g2097 773 Gene3D Phosphorylase Kinase; domain 1 468 569 - -
Mch1g2097 773 Pfam Protein tyrosine and serine/threonine kinase 500 761 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g2097 773 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524(InterPro)
Mch1g2097 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch1g2097 773 Gene3D - 195 379 - -
Mch1g2097 773 Gene3D - 2 171 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch1g1619 Mch-Chr1:17238468 Mch1g2097 Mch-Chr1:20336445 1.44E-67 dispersed
Mch1g2097 Mch-Chr1:20336445 Mch6g0255 Mch-Chr6:1654735 1.37E-201 dispersed
Mch1g2097 Mch-Chr1:20336445 Mch9g0371 Mch-Chr9:2752302 1.58E-196 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77169 PF12819 Malectin_like 1.20E-29 CL0202 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g2097 - - - 0.0