Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g2098 GACTATATCGTTGCCAAAGAACGACATGTCCACGACCACAAGCTGGGGCTCTTTGCAATATTCGACGGCCACTCTGGTCGTGATGTTGCAGAGTACTTGCAGAGCCATCTGGTTGGTAAAATCTTAAGCCAGTTTGATTTCTGGGAAGGCCCTAAAGGAGCAATCAGGAGGGCATATAAAGCAACAGACGTTGAGATTTTGGCCAAAAAAGTGAGAAGCAGAGTAGGCTCAACAGCAGTCACAGCTATACTAATTGATGGACAGAAGCTAATTGTTGCAAACGTTGGCGACTCATGGGTGGTGCTATGCAGAAATGGCTTGGTGAACCGATTACTCAATCATGAACTAGAGATGGAGAAGGAGATTGTCGAGAGCCAAGGCGGATTCGTTGCACAAATGCCAGGAAATGTGGCACGGGTGGATGGTCAGCTAGCAATGTCAAGGGCATTTGGAGATGCAAAGCTCAAAGAACACATTACTTCAGAACCAGATATCAGGATCGTGACCATTGACAATCGGGCTGAGTTCACCATTTTGGCCAGTGATGGCCTCTGGAAGATTCATTACTCTTGCCCATTTGTGATGTCAAACCAGGAGGCTTGCGATTTCATCAGAGAAATGGCTATGGATGCTCAAGAGGTTGCAGAGGAGTTGATCAACGAGGCATTATCTCGGAAGAGCAACGATGACATTTCCTGTATTGTTGTTACCTTCCAC 717 46.58 DYIVAKERHVHDHKLGLFAIFDGHSGRDVAEYLQSHLVGKILSQFDFWEGPKGAIRRAYKATDVEILAKKVRSRVGSTAVTAILIDGQKLIVANVGDSWVVLCRNGLVNRLLNHELEMEKEIVESQGGFVAQMPGNVARVDGQLAMSRAFGDAKLKEHITSEPDIRIVTIDNRAEFTILASDGLWKIHYSCPFVMSNQEACDFIREMAMDAQEVAEELINEALSRKSNDDISCIVVTFH 239
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 20339398 20340570 - MC01g1614 Mch1g2098 676990
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch1g2098 239 Gene3D - 1 239 IPR036457 -
Mch1g2098 239 SUPERFAMILY PP2C-like 8 239 IPR036457 -
Mch1g2098 239 SMART PP2C_4 1 236 IPR001932 -
Mch1g2098 239 CDD PP2Cc 1 238 IPR001932 -
Mch1g2098 239 ProSiteProfiles PPM-type phosphatase domain profile. 1 238 IPR001932 -
Mch1g2098 239 FunFam Probable protein phosphatase 2C 39 1 239 - -
Mch1g2098 239 PANTHER PROTEIN PHOSPHATASE 3 236 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch1g2098 239 Pfam Protein phosphatase 2C 11 231 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g1054 Mch-Chr11:7341252 Mch1g2098 Mch-Chr1:20339398 3.55E-82 dispersed
Mch1g2098 Mch-Chr1:20339398 Mch4g1826 Mch-Chr4:21120484 9.39E-43 dispersed
Mch1g2098 Mch-Chr1:20339398 Mch4g0141 Mch-Chr4:940150 1.46E-86 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g2098 K14803 - csv:101211141 342.428