Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch1g2117 ATGGTCGGAGCTTTCGAAGTCGGAGCTGTCCCCTACAACCCAGACGGTTGGGGTCCGCCGGACTCCACCGCCACTCTCGCCGCATCCTCCAACCTCCCTCTCAATGTGCCCTTTGCCCCATTCTCTCGCTCCGACAAGCTTGGCCGGATCGCCGATTGGACGCGCACAATCAACAACCCCGGTCGCCCCAAGACCGCTTCCGATTCCGTCTTCGATTTCACCAATGACGATTCCTTCCCCGCCAACGCCGACGAGGACATGTCCTTCCGTTTGGTTGATGGAAAGCCTCCTCCGCGTCCCAAATTTGGCCCTAAATGGCGATTCAACCAGCAACGAACGCAGCTGCCCCAACGCCGCGACGAAGAAGTTGAGGCTCGGAAGCGCGAGGCTGAGAAGGAGCGGGCTCGACGCGACCGCCTCTACAACCTCAACAGGTCTAATGTCAATGCGCCGCGTCGTGAGGCTGCTGTTTTCAAGTCCTCCGTGGAAATTCAACCGGAATGGAACATGCTCGATCAAATTCCCTTCTCCACGTTCTCGAAGCTGTCCTTCTCTGTTCCTGAGCCCGAAGACCTTCTTCTGTGCGGTGGGCTAGAGTTCTATGATCGAGCGAACGACCGAATCACTCCCAAGAACGAGCGCCGTCTCGAGCGCTTCAAGAATCGCAACTTCTTCAAGGTAACCACTACCGACGATCCTGTCATTCGTCGTCTCGCAAATGAGGACAAAGCCACAGTTTTTGCTACTGACGCGATCCTTTCCACGCTTATGTGTGCTACAAGATCGGTTTATTCCTGGGATATTGTGGTTCAGCGTGTTGGTAACAAGCTTTTCTTTGATAAGAGGGATGGGTCGCAACTTGATTTGCTTGCCGTCCACGAGACCTCGCAGGAACCCTTACCAGAGGCGAAGGACGATATCAATTCTGCTTACTCACTGAGCGTTGAAGCCGCTTACATTAATCAGAACTTCTCGCAGCAAGTTTTAGTTAGGGACGGTAACAAGGTGGCCTTTGACGAGCCAAATCCATTTGCAAATGAGGGCGAGGAGGTCGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAACTCGATGATGAAATGTATCTTGTGGCAAGGTGTGAGGTTCAAAGTGTTATGGAGGTTAATAAGCAGAGATCGTTCTTGACTTTGAATGCTCTCAATGAATTTGATCCCAAGTATTCTGGTGTTGATTGGAGGCAGAAATTGGAGACACAAAGGGGTGCTGTTTTGGCCACTGAGTTGAAGAACAACGCTAATAAATTGGCAAAATGGACAGCTCAAGCTTTGTTAGCTAGCGCAGATATGATGAAGTTGGGGTATGTCTCTAGGGTTCATCCTCGTGATCACTTTAACCATGTTATCTTAGCTGTGGTTGGATATAAACCCAAGGATTTTGCAGCTCAGATTAACTTGAATACTTCTAATATGTGGGGTATTGTCAAATCTATTGTGGATTTGTGCATGAAATTAAACGAAGGTAAGTATGTTTTGGTTAAGGACCCGTCGAAACCACAGGTTCGGATCTATGAGGTTCCTGCAGATGCATTTGAGAACGATTATGTTGAGGAGCCACTGGCTGAGGAGGATCAAGTGCAACCACCAGGAGAGGATGAAAATGGTGCAACTGATAATGTGGCAACAAATGATGCAGAAGAGAAGGTTGATGCTCAAGCTTAA 1698 49.59 MVGAFEVGAVPYNPDGWGPPDSTATLAASSNLPLNVPFAPFSRSDKLGRIADWTRTINNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRANDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDEMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPGEDENGATDNVATNDAEEKVDAQA 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20421919 20423997 + MC01g1621 Mch1g2117 677009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch1g2117 565 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 5 517 IPR007783 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Mch1g2117 565 PIRSF Transl_init_eIF3d 1 547 IPR007783 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Mch1g2117 565 MobiDBLite consensus disorder prediction 527 565 - -
Mch1g2117 565 MobiDBLite consensus disorder prediction 114 134 - -
Mch1g2117 565 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 3 540 IPR007783 GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005737(InterPro)|GO:0005852(InterPro)|GO:0005852(PANTHER)|GO:0006413(PANTHER)
Mch1g2117 565 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 529 IPR007783 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Mch1g2117 565 MobiDBLite consensus disorder prediction 527 541 - -
Mch1g2117 565 Coils Coil 118 138 - -
Mch1g2117 565 MobiDBLite consensus disorder prediction 88 134 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch1g2117 K03251 - csv:101208923 1085.09